RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 TRACP01848 142 aa3.39□□□□□ -1.87
CDC42SE2-201ENST00000360515 S100A4P26447 101 aaKnown RBP3.39□□□□□ -1.87
CDC42SE2-201ENST00000360515 LOC100996750A0A140TA64 210 aa3.39□□□□□ -1.87
CDC42SE2-201ENST00000360515 TEX49A0A1B0GTD5 131 aa3.39□□□□□ -1.87
CDC42SE2-201ENST00000360515 DPM2O94777 84 aa3.39□□□□□ -1.87
CDC42SE2-201ENST00000360515 TMEM258P61165 79 aa3.39□□□□□ -1.87
CDC42SE2-201ENST00000360515 KRTAP4-6Q9BYQ5 205 aa3.39□□□□□ -1.87
CDC42SE2-201ENST00000360515 hADV29S1A0JD25 119 aa3.38□□□□□ -1.87
CDC42SE2-201ENST00000360515 TWIST1Q15672 202 aa3.38□□□□□ -1.87
CDC42SE2-201ENST00000360515 DSCR8Q96T75 97 aa3.38□□□□□ -1.87
CDC42SE2-201ENST00000360515 A0A1B0GUT8 65 aa3.38□□□□□ -1.87
CDC42SE2-201ENST00000360515 SUMO4Q6EEV6 95 aa3.38□□□□□ -1.87
CDC42SE2-201ENST00000360515 IGLV7-46A0A075B6I9 117 aa3.38□□□□□ -1.87
CDC42SE2-201ENST00000360515 A0A087X002 238 aa3.38□□□□□ -1.87
CDC42SE2-201ENST00000360515 FAM236DA0A1B0GTK5 79 aa3.38□□□□□ -1.87
CDC42SE2-201ENST00000360515 D6R8Y8 96 aa3.38□□□□□ -1.87
CDC42SE2-201ENST00000360515 FAM236CP0DP71 79 aa3.38□□□□□ -1.87
CDC42SE2-201ENST00000360515 RIGQ13278 110 aa3.38□□□□□ -1.87
CDC42SE2-201ENST00000360515 PHF5AQ7RTV0 110 aaKnown RBP3.38□□□□□ -1.87
CDC42SE2-201ENST00000360515 FAM240AA0A1B0GVK7 77 aa3.37□□□□□ -1.87
CDC42SE2-201ENST00000360515 J3QQQ9 107 aa3.37□□□□□ -1.87
CDC42SE2-201ENST00000360515 TSHBP01222 138 aa3.37□□□□□ -1.87
CDC42SE2-201ENST00000360515 PFN2P35080 140 aa3.37□□□□□ -1.87
CDC42SE2-201ENST00000360515 C1orf195Q5TG92 126 aa3.37□□□□□ -1.87
CDC42SE2-201ENST00000360515 CDC42SE2Q9NRR3 84 aa3.37□□□□□ -1.87
CDC42SE2-201ENST00000360515 IGKV2-24A0A0C4DH68 120 aa3.37□□□□□ -1.87
CDC42SE2-201ENST00000360515 CYSTM1Q9H1C7 97 aa3.37□□□□□ -1.87
CDC42SE2-201ENST00000360515 TRAV13-1A0A0B4J241 112 aa3.37□□□□□ -1.87
CDC42SE2-201ENST00000360515 TRBV30A0A0K0K1B3 111 aa3.37□□□□□ -1.87
CDC42SE2-201ENST00000360515 NXT2Q9NPJ8 142 aaKnown RBP3.37□□□□□ -1.87
CDC42SE2-201ENST00000360515 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
CDC42SE2-201ENST00000360515 FAM19A3Q7Z5A8 133 aa3.36□□□□□ -1.87
CDC42SE2-201ENST00000360515 ORMDL3Q8N138 153 aa3.36□□□□□ -1.87
CDC42SE2-201ENST00000360515 SS18Q15532 418 aa3.36□□□□□ -1.87
CDC42SE2-201ENST00000360515 A0A0U1RRA0 63 aa3.35□□□□□ -1.87
CDC42SE2-201ENST00000360515 BCE1O60756 84 aa3.35□□□□□ -1.87
CDC42SE2-201ENST00000360515 HERVK_113P61574 105 aa3.35□□□□□ -1.87
CDC42SE2-201ENST00000360515 HIGD2BQ4VC39 106 aa3.35□□□□□ -1.87
CDC42SE2-201ENST00000360515 TRBV10-2A0A0K0K1G8 114 aa3.35□□□□□ -1.87
CDC42SE2-201ENST00000360515 CFC1P0CG37 223 aa3.35□□□□□ -1.87
CDC42SE2-201ENST00000360515 ZNF22P17026 224 aaPredicted RBP3.35□□□□□ -1.87
CDC42SE2-201ENST00000360515 C6orf226Q5I0X4 101 aa3.35□□□□□ -1.87
CDC42SE2-201ENST00000360515 FAM74A4Q5TZK3 123 aa3.35□□□□□ -1.87
CDC42SE2-201ENST00000360515 FAM104BQ5XKR9 115 aa3.35□□□□□ -1.87
CDC42SE2-201ENST00000360515 LINC00304Q8N9R0 145 aa3.35□□□□□ -1.87
CDC42SE2-201ENST00000360515 MRPL51Q4U2R6 128 aaKnown RBP3.35□□□□□ -1.87
CDC42SE2-201ENST00000360515 TMEM170BQ5T4T1 132 aa3.35□□□□□ -1.87
CDC42SE2-201ENST00000360515 PRO1854Q9UHT4 67 aa3.35□□□□□ -1.87
CDC42SE2-201ENST00000360515 M0R381 172 aa3.34□□□□□ -1.87
CDC42SE2-201ENST00000360515 ATXN8Q156A1 80 aa3.34□□□□□ -1.87
CDC42SE2-201ENST00000360515 SCGB1D4Q6XE38 83 aa3.34□□□□□ -1.87
CDC42SE2-201ENST00000360515 TYMSOSQ8TAI1 123 aa3.34□□□□□ -1.87
CDC42SE2-201ENST00000360515 ATOX1O00244 68 aa3.34□□□□□ -1.88
CDC42SE2-201ENST00000360515 PLNP26678 52 aa3.34□□□□□ -1.88
CDC42SE2-201ENST00000360515 CKS2P33552 79 aa3.34□□□□□ -1.88
CDC42SE2-201ENST00000360515 KIAA0087Q14695 138 aa3.34□□□□□ -1.88
CDC42SE2-201ENST00000360515 CLPSL2Q6UWE3 100 aa3.34□□□□□ -1.88
CDC42SE2-201ENST00000360515 Q8N8P6 123 aa3.34□□□□□ -1.88
CDC42SE2-201ENST00000360515 PLEKHB2Q96CS7 222 aa3.34□□□□□ -1.88
CDC42SE2-201ENST00000360515 TRBV27A0A0K0K1C4 114 aa3.33□□□□□ -1.88
CDC42SE2-201ENST00000360515 LINC01546A6NGU7 62 aa3.33□□□□□ -1.88
CDC42SE2-201ENST00000360515 SMKR1H3BMG3 65 aa3.33□□□□□ -1.88
CDC42SE2-201ENST00000360515 C2orf82Q6UX34 121 aa3.33□□□□□ -1.88
CDC42SE2-201ENST00000360515 ZNF815PA8K554 130 aa3.33□□□□□ -1.88
CDC42SE2-201ENST00000360515 CXCL5P42830 114 aa3.33□□□□□ -1.88
CDC42SE2-201ENST00000360515 RPL28P46779 137 aaKnown RBP3.33□□□□□ -1.88
CDC42SE2-201ENST00000360515 MRPS36P82909 103 aaKnown RBP3.33□□□□□ -1.88
CDC42SE2-201ENST00000360515 RPL18AQ02543 176 aaKnown RBP3.33□□□□□ -1.88
CDC42SE2-201ENST00000360515 C5orf38Q86SI9 138 aa3.33□□□□□ -1.88
CDC42SE2-201ENST00000360515 LINC00643Q86TS7 51 aa3.33□□□□□ -1.88
CDC42SE2-201ENST00000360515 FAM104AQ969W3 186 aa3.33□□□□□ -1.88
CDC42SE2-201ENST00000360515 ZNF561-AS1K7EIQ3 104 aa3.33□□□□□ -1.88
CDC42SE2-201ENST00000360515 ACYP1P07311 99 aa3.33□□□□□ -1.88
CDC42SE2-201ENST00000360515 UBE2L6O14933 153 aa3.32□□□□□ -1.88
CDC42SE2-201ENST00000360515 POLR2KP53803 58 aaKnown RBP3.32□□□□□ -1.88
CDC42SE2-201ENST00000360515 HIST1H4AP62805 103 aaKnown RBP3.32□□□□□ -1.88
CDC42SE2-201ENST00000360515 COX7A2LO14548 114 aa3.32□□□□□ -1.88
CDC42SE2-201ENST00000360515 USH2AO75445 5202 aa3.32□□□□□ -1.88
CDC42SE2-201ENST00000360515 F8VRH5 84 aa3.32□□□□□ -1.88
CDC42SE2-201ENST00000360515 H3BT86 120 aa3.32□□□□□ -1.88
CDC42SE2-201ENST00000360515 C9orf129Q5T035 196 aaKnown RBP3.32□□□□□ -1.88
CDC42SE2-201ENST00000360515 SMCR5Q8TEV8 140 aa3.32□□□□□ -1.88
CDC42SE2-201ENST00000360515 IGHV3OR16-9A0A0B4J2B5 98 aa3.31□□□□□ -1.88
CDC42SE2-201ENST00000360515 LYZL1Q6UWQ5 148 aa3.31□□□□□ -1.88
CDC42SE2-201ENST00000360515 FAM19A1Q7Z5A9 133 aa3.31□□□□□ -1.88
CDC42SE2-201ENST00000360515 NDUFC2-KCTD14E9PQ53 114 aa3.31□□□□□ -1.88
CDC42SE2-201ENST00000360515 SERP2Q8N6R1 65 aa3.31□□□□□ -1.88
CDC42SE2-201ENST00000360515 C6orf48Q9UBA6 75 aa3.31□□□□□ -1.88
CDC42SE2-201ENST00000360515 FCGBPQ9Y6R7 5405 aaPredicted RBP3.31□□□□□ -1.88
CDC42SE2-201ENST00000360515 H7C2G1 150 aa3.31□□□□□ -1.88
CDC42SE2-201ENST00000360515 I3L3M4 83 aa3.31□□□□□ -1.88
CDC42SE2-201ENST00000360515 KRTAP9-8Q9BYQ0 159 aa3.31□□□□□ -1.88
CDC42SE2-201ENST00000360515 TRAV12-1A0A0B4J245 112 aa3.3□□□□□ -1.88
CDC42SE2-201ENST00000360515 NPC2P61916 151 aa3.3□□□□□ -1.88
CDC42SE2-201ENST00000360515 EIF4EBP3O60516 100 aaPredicted RBP3.3□□□□□ -1.88
CDC42SE2-201ENST00000360515 KRTAP19-6Q3LI70 58 aa3.3□□□□□ -1.88
CDC42SE2-201ENST00000360515 BRK1Q8WUW1 75 aa3.3□□□□□ -1.88
CDC42SE2-201ENST00000360515 CAMK2N2Q96S95 79 aa3.3□□□□□ -1.88
CDC42SE2-201ENST00000360515 Q1RN00 199 aa3.3□□□□□ -1.88
CDC42SE2-201ENST00000360515 UBE2D4Q9Y2X8 147 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms