RNA–Protein interactions for RNA: ENST00000359062.3

PDE3A-201, Transcript of phosphodiesterase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE3A, Length 7,576 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-201ENST00000359062 C9orf129Q5T035 196 aaKnown RBP10.22□□□□□ -0.77
PDE3A-201ENST00000359062 Q8N377 158 aa10.22□□□□□ -0.77
PDE3A-201ENST00000359062 C15orf56Q8N910 161 aa10.22□□□□□ -0.77
PDE3A-201ENST00000359062 PKD1L2Q7Z442 2459 aa10.22□□□□□ -0.77
PDE3A-201ENST00000359062 LINC00528Q8N1L1 170 aa10.22□□□□□ -0.77
PDE3A-201ENST00000359062 SMR3BP02814 79 aaPredicted RBP10.21□□□□□ -0.78
PDE3A-201ENST00000359062 ZNF861PO60384 105 aa10.21□□□□□ -0.78
PDE3A-201ENST00000359062 EIF4EBP3O60516 100 aaPredicted RBP10.2□□□□□ -0.78
PDE3A-201ENST00000359062 LINC01554Q52M75 96 aa10.2□□□□□ -0.78
PDE3A-201ENST00000359062 F8P00451 2351 aa10.2□□□□□ -0.78
PDE3A-201ENST00000359062 A0A0D9SG42 100 aa10.19□□□□□ -0.78
PDE3A-201ENST00000359062 PIEZO1Q92508 2521 aa10.18□□□□□ -0.78
PDE3A-201ENST00000359062 IGLV5-37A0A075B6J1 123 aa10.17□□□□□ -0.78
PDE3A-201ENST00000359062 UTRNP46939 3433 aa10.17□□□□□ -0.78
PDE3A-201ENST00000359062 K7EIL1 84 aa10.15□□□□□ -0.78
PDE3A-201ENST00000359062 BPTFQ12830 3046 aa10.15□□□□□ -0.79
PDE3A-201ENST00000359062 RBM12B-AS1Q9P1G2 102 aa10.13□□□□□ -0.79
PDE3A-201ENST00000359062 KLKP1Q107X0 134 aa10.12□□□□□ -0.79
PDE3A-201ENST00000359062 A0A087WTM6 91 aa10.11□□□□□ -0.79
PDE3A-201ENST00000359062 Q8N1X5 172 aa10.1□□□□□ -0.79
PDE3A-201ENST00000359062 PRR34Q9NV39 138 aa10.1□□□□□ -0.79
PDE3A-201ENST00000359062 C5orf42Q9H799 3197 aa10.08□□□□□ -0.8
PDE3A-201ENST00000359062 H7BZZ5 65 aa10.08□□□□□ -0.8
PDE3A-201ENST00000359062 LINC00336Q6ZUF6 198 aa10.08□□□□□ -0.8
PDE3A-201ENST00000359062 SPTBN4Q9H254 2564 aa10.08□□□□□ -0.8
PDE3A-201ENST00000359062 CDC42SE1Q9NRR8 79 aa10.07□□□□□ -0.8
PDE3A-201ENST00000359062 KTN1-AS1Q86SY8 53 aa10.07□□□□□ -0.8
PDE3A-201ENST00000359062 IGLV7-43P04211 117 aa10.07□□□□□ -0.8
PDE3A-201ENST00000359062 KRTAP10-3P60369 221 aa10.06□□□□□ -0.8
PDE3A-201ENST00000359062 PSORS1C2Q9UIG4 136 aa10.06□□□□□ -0.8
PDE3A-201ENST00000359062 PLA2G2DQ9UNK4 145 aa10.06□□□□□ -0.8
PDE3A-201ENST00000359062 KLK9Q2XQG4 91 aa10.05□□□□□ -0.8
PDE3A-201ENST00000359062 IGLV5-48A0A075B6I7 105 aa10.05□□□□□ -0.8
PDE3A-201ENST00000359062 USP9YO00507 2555 aaPredicted RBP10.05□□□□□ -0.8
PDE3A-201ENST00000359062 C19orf73Q9NVV2 129 aa10.04□□□□□ -0.8
PDE3A-201ENST00000359062 TLX1NBP0CAT3 122 aa10.04□□□□□ -0.8
PDE3A-201ENST00000359062 FAM104AQ969W3 186 aa10.04□□□□□ -0.8
PDE3A-201ENST00000359062 GIG44P09565 113 aaPredicted RBP10.02□□□□□ -0.8
PDE3A-201ENST00000359062 CD164Q04900 197 aa10.01□□□□□ -0.81
PDE3A-201ENST00000359062 CASC10Q5T4H9 136 aa10.01□□□□□ -0.81
PDE3A-201ENST00000359062 MTORP42345 2549 aa10□□□□□ -0.81
PDE3A-201ENST00000359062 C9orf163Q8N9P6 203 aa10□□□□□ -0.81
PDE3A-201ENST00000359062 SPRR4Q96PI1 79 aa10□□□□□ -0.81
PDE3A-201ENST00000359062 LCA10Q71F78 164 aa9.99□□□□□ -0.81
PDE3A-201ENST00000359062 ZNF575Q86XF7 245 aa9.99□□□□□ -0.81
PDE3A-201ENST00000359062 CHD8Q9HCK8 2581 aa9.98□□□□□ -0.81
PDE3A-201ENST00000359062 ZNF462Q96JM2 2506 aa9.98□□□□□ -0.81
PDE3A-201ENST00000359062 SPANXA2-OT1Q8N9U9 137 aa9.95□□□□□ -0.82
PDE3A-201ENST00000359062 A0A1W2PNM2 257 aa9.94□□□□□ -0.82
PDE3A-201ENST00000359062 LUZP6Q538Z0 58 aa9.94□□□□□ -0.82
PDE3A-201ENST00000359062 POLQO75417 2590 aa9.94□□□□□ -0.82
PDE3A-201ENST00000359062 PRRC2CQ9Y520 2896 aaKnown RBP9.93□□□□□ -0.82
PDE3A-201ENST00000359062 LINC00612Q8N6U2 182 aa9.9□□□□□ -0.83
PDE3A-201ENST00000359062 PCNTO95613 3336 aa9.89□□□□□ -0.83
PDE3A-201ENST00000359062 CNBPP62633 177 aaKnown RBP9.89□□□□□ -0.83
PDE3A-201ENST00000359062 PRR26Q8N8Z3 221 aa9.85□□□□□ -0.83
PDE3A-201ENST00000359062 A0A096LNT2 108 aa9.84□□□□□ -0.83
PDE3A-201ENST00000359062 Q6ZSA8 131 aa9.84□□□□□ -0.83
PDE3A-201ENST00000359062 CEP295Q9C0D2 2601 aa9.83□□□□□ -0.84
PDE3A-201ENST00000359062 USP24Q9UPU5 2620 aa9.81□□□□□ -0.84
PDE3A-201ENST00000359062 CAMK2N1Q7Z7J9 78 aa9.81□□□□□ -0.84
PDE3A-201ENST00000359062 Q1T7F1 81 aa9.8□□□□□ -0.84
PDE3A-201ENST00000359062 CEP350Q5VT06 3117 aa9.8□□□□□ -0.84
PDE3A-201ENST00000359062 M0R2T5 61 aa9.79□□□□□ -0.84
PDE3A-201ENST00000359062 OCR1Q9BZK8 76 aa9.78□□□□□ -0.84
PDE3A-201ENST00000359062 LINC00483Q53H64 154 aa9.77□□□□□ -0.85
PDE3A-201ENST00000359062 A0A1B0GU33 70 aa9.77□□□□□ -0.85
PDE3A-201ENST00000359062 TNP2Q05952 138 aa9.75□□□□□ -0.85
PDE3A-201ENST00000359062 IGLV7-46A0A075B6I9 117 aa9.74□□□□□ -0.85
PDE3A-201ENST00000359062 HRES1P13985 223 aa9.73□□□□□ -0.85
PDE3A-201ENST00000359062 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.71□□□□□ -0.85
PDE3A-201ENST00000359062 FASNP49327 2511 aaKnown RBP9.7□□□□□ -0.86
PDE3A-201ENST00000359062 FAM229BQ4G0N7 80 aa9.7□□□□□ -0.86
PDE3A-201ENST00000359062 KRTAP1-3Q8IUG1 177 aa9.68□□□□□ -0.86
PDE3A-201ENST00000359062 S4R3F8 94 aa9.68□□□□□ -0.86
PDE3A-201ENST00000359062 Q75L30 129 aa9.67□□□□□ -0.86
PDE3A-201ENST00000359062 WIPF1O43516 503 aa9.62□□□□□ -0.87
PDE3A-201ENST00000359062 CFAP54Q96N23 3096 aa9.61□□□□□ -0.87
PDE3A-201ENST00000359062 ZCCHC13Q8WW36 166 aaKnown RBP9.59□□□□□ -0.87
PDE3A-201ENST00000359062 KRTAP1-1Q07627 177 aa9.58□□□□□ -0.88
PDE3A-201ENST00000359062 DMAC1Q96GE9 116 aa9.58□□□□□ -0.88
PDE3A-201ENST00000359062 Q8N9P0 234 aaPredicted RBP9.57□□□□□ -0.88
PDE3A-201ENST00000359062 FLG2Q5D862 2391 aaPredicted RBP9.57□□□□□ -0.88
PDE3A-201ENST00000359062 PRAC1Q96KF2 57 aa9.55□□□□□ -0.88
PDE3A-201ENST00000359062 MMP24-AS1A0A0U1RRL7 71 aa9.55□□□□□ -0.88
PDE3A-201ENST00000359062 MKI67P46013 3256 aaKnown RBP9.55□□□□□ -0.88
PDE3A-201ENST00000359062 CSAG1Q6PB30 78 aa9.54□□□□□ -0.88
PDE3A-201ENST00000359062 XIRP2A4UGR9 3374 aa9.52□□□□□ -0.89
PDE3A-201ENST00000359062 LINC01558Q9Y6Z2 57 aa9.51□□□□□ -0.89
PDE3A-201ENST00000359062 Q5W150 140 aa9.5□□□□□ -0.89
PDE3A-201ENST00000359062 PLAC8Q9NZF1 115 aa9.48□□□□□ -0.89
PDE3A-201ENST00000359062 Q5XG85 94 aa9.48□□□□□ -0.89
PDE3A-201ENST00000359062 Q8NDZ9 215 aa9.48□□□□□ -0.89
PDE3A-201ENST00000359062 CYSTM1Q9H1C7 97 aa9.47□□□□□ -0.89
PDE3A-201ENST00000359062 R4GN34 69 aa9.47□□□□□ -0.89
PDE3A-201ENST00000359062 H3BS24 57 aa9.45□□□□□ -0.9
PDE3A-201ENST00000359062 SPINK7P58062 85 aa9.45□□□□□ -0.9
PDE3A-201ENST00000359062 Q5VV11 94 aa9.45□□□□□ -0.9
PDE3A-201ENST00000359062 LAMA2P24043 3122 aaKnown RBP9.45□□□□□ -0.9
PDE3A-201ENST00000359062 FP248Q71RG6 208 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms