RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 LINC00167Q96N53 147 aa9.26□□□□□ -0.93
CCNE1-202ENST00000357943 NDUFC2O95298 119 aa9.25□□□□□ -0.93
CCNE1-202ENST00000357943 LYRM7Q5U5X0 104 aa9.25□□□□□ -0.93
CCNE1-202ENST00000357943 UBE2BP63146 152 aa9.24□□□□□ -0.93
CCNE1-202ENST00000357943 A0A0B4J2C4 111 aa9.23□□□□□ -0.93
CCNE1-202ENST00000357943 RPL37AP8A6NKH3 93 aa9.23□□□□□ -0.93
CCNE1-202ENST00000357943 IGKV2-28A0A075B6P5 120 aa9.23□□□□□ -0.93
CCNE1-202ENST00000357943 M0R378 163 aa9.23□□□□□ -0.93
CCNE1-202ENST00000357943 IGKV2D-28P01615 120 aa9.23□□□□□ -0.93
CCNE1-202ENST00000357943 Q8N1X5 172 aa9.22□□□□□ -0.93
CCNE1-202ENST00000357943 PSORS1C2Q9UIG4 136 aa9.21□□□□□ -0.93
CCNE1-202ENST00000357943 IGLV1-50A0A075B6I6 118 aa9.2□□□□□ -0.94
CCNE1-202ENST00000357943 TRBV10-2A0A0K0K1G8 114 aa9.2□□□□□ -0.94
CCNE1-202ENST00000357943 FAM229AH3BQW9 127 aa9.2□□□□□ -0.94
CCNE1-202ENST00000357943 Q5VSD8 79 aa9.2□□□□□ -0.94
CCNE1-202ENST00000357943 SIGMAR1Q99720 223 aa9.2□□□□□ -0.94
CCNE1-202ENST00000357943 PRO1854Q9UHT4 67 aa9.2□□□□□ -0.94
CCNE1-202ENST00000357943 RPL37AP61513 92 aaKnown RBP9.2□□□□□ -0.94
CCNE1-202ENST00000357943 ABCA13Q86UQ4 5058 aa9.19□□□□□ -0.94
CCNE1-202ENST00000357943 TRBV10-3A0A0K0K1G6 114 aa9.19□□□□□ -0.94
CCNE1-202ENST00000357943 NAA38Q9BRA0 125 aaKnown RBP9.19□□□□□ -0.94
CCNE1-202ENST00000357943 KRTAP10-4P60372 401 aaPredicted RBP9.18□□□□□ -0.94
CCNE1-202ENST00000357943 LINC00337Q8N6G1 96 aa9.18□□□□□ -0.94
CCNE1-202ENST00000357943 TSPAN13O95857 204 aa9.17□□□□□ -0.94
CCNE1-202ENST00000357943 SRRM2Q9UQ35 2752 aaKnown RBP9.17□□□□□ -0.94
CCNE1-202ENST00000357943 IGLV6-57P01721 117 aa9.16□□□□□ -0.94
CCNE1-202ENST00000357943 C1orf137Q5JT78 98 aa9.16□□□□□ -0.94
CCNE1-202ENST00000357943 S100A7L2Q5SY68 101 aa9.16□□□□□ -0.94
CCNE1-202ENST00000357943 TRBV20-1A0A075B6N2 111 aa9.16□□□□□ -0.94
CCNE1-202ENST00000357943 MTURNQ8N3F0 131 aa9.16□□□□□ -0.94
CCNE1-202ENST00000357943 PLA2G1BP04054 148 aaKnown RBP9.15□□□□□ -0.94
CCNE1-202ENST00000357943 OR13C6PQ8NH95 151 aa9.15□□□□□ -0.94
CCNE1-202ENST00000357943 KRTAP4-5Q9BYR2 181 aa9.15□□□□□ -0.94
CCNE1-202ENST00000357943 H3BMG7 143 aa9.14□□□□□ -0.95
CCNE1-202ENST00000357943 TMEM126AQ9H061 195 aa9.14□□□□□ -0.95
CCNE1-202ENST00000357943 KCNQ1DNQ9H478 68 aa9.14□□□□□ -0.95
CCNE1-202ENST00000357943 PKHD1L1Q86WI1 4243 aa9.14□□□□□ -0.95
CCNE1-202ENST00000357943 TRAV13-2A0A0B4J235 113 aa9.13□□□□□ -0.95
CCNE1-202ENST00000357943 RPL13AP40429 203 aaKnown RBP9.13□□□□□ -0.95
CCNE1-202ENST00000357943 REG3GQ6UW15 175 aa9.13□□□□□ -0.95
CCNE1-202ENST00000357943 H7C2G1 150 aa9.13□□□□□ -0.95
CCNE1-202ENST00000357943 TRAV23DV6A0A075B6W5 121 aa9.11□□□□□ -0.95
CCNE1-202ENST00000357943 PRYO14603 147 aa9.11□□□□□ -0.95
CCNE1-202ENST00000357943 BCE1O60756 84 aa9.11□□□□□ -0.95
CCNE1-202ENST00000357943 Q1RN00 199 aa9.11□□□□□ -0.95
CCNE1-202ENST00000357943 PRO0461Q9UI25 63 aa9.11□□□□□ -0.95
CCNE1-202ENST00000357943 IGLV7-43P04211 117 aa9.1□□□□□ -0.95
CCNE1-202ENST00000357943 SPRR1AP35321 89 aa9.1□□□□□ -0.95
CCNE1-202ENST00000357943 A0A1B0GV72 72 aa9.09□□□□□ -0.95
CCNE1-202ENST00000357943 MYCBP2O75592 4640 aa9.09□□□□□ -0.95
CCNE1-202ENST00000357943 KRTAP4-16G5E9R7 235 aaPredicted RBP9.08□□□□□ -0.96
CCNE1-202ENST00000357943 PSMB2P49721 201 aa9.08□□□□□ -0.96
CCNE1-202ENST00000357943 ETDBQ3ZM63 59 aa9.08□□□□□ -0.96
CCNE1-202ENST00000357943 FAM19A1Q7Z5A9 133 aa9.08□□□□□ -0.96
CCNE1-202ENST00000357943 TRIAP1O43715 76 aa9.07□□□□□ -0.96
CCNE1-202ENST00000357943 ZNF73O43830 326 aaPredicted RBP9.07□□□□□ -0.96
CCNE1-202ENST00000357943 PRLHP81277 87 aa9.07□□□□□ -0.96
CCNE1-202ENST00000357943 LRP1Q07954 4544 aaKnown RBP9.07□□□□□ -0.96
CCNE1-202ENST00000357943 KRTAP13-1Q8IUC0 172 aa9.06□□□□□ -0.96
CCNE1-202ENST00000357943 PPDPFLQ8WWR9 84 aa9.06□□□□□ -0.96
CCNE1-202ENST00000357943 PCLOQ9Y6V0 5065 aa9.06□□□□□ -0.96
CCNE1-202ENST00000357943 FAT3Q8TDW7 4589 aa9.06□□□□□ -0.96
CCNE1-202ENST00000357943 ETDCA0A1B0GVM5 59 aa9.05□□□□□ -0.96
CCNE1-202ENST00000357943 ZNF861PO60384 105 aa9.05□□□□□ -0.96
CCNE1-202ENST00000357943 SCGB1C2P0DMR2 95 aa9.05□□□□□ -0.96
CCNE1-202ENST00000357943 UBE2AP49459 152 aa9.05□□□□□ -0.96
CCNE1-202ENST00000357943 SMIM11BQ8TCY0 68 aa9.05□□□□□ -0.96
CCNE1-202ENST00000357943 RPL28P46779 137 aaKnown RBP9.05□□□□□ -0.96
CCNE1-202ENST00000357943 C6orf99Q4VX62 202 aa9.05□□□□□ -0.96
CCNE1-202ENST00000357943 TEN1Q86WV5 123 aa9.04□□□□□ -0.96
CCNE1-202ENST00000357943 DIRC1Q969H9 104 aa9.04□□□□□ -0.96
CCNE1-202ENST00000357943 B5MCH6 92 aa9.03□□□□□ -0.96
CCNE1-202ENST00000357943 COX6CP09669 75 aa9.03□□□□□ -0.96
CCNE1-202ENST00000357943 LINC01600Q96MT4 127 aa9.03□□□□□ -0.96
CCNE1-202ENST00000357943 TCL1BO95988 128 aa9.02□□□□□ -0.96
CCNE1-202ENST00000357943 SPINK6Q6UWN8 80 aa9.02□□□□□ -0.96
CCNE1-202ENST00000357943 H0Y9J4 135 aa9.01□□□□□ -0.97
CCNE1-202ENST00000357943 Q6ZRX8 168 aa9.01□□□□□ -0.97
CCNE1-202ENST00000357943 INAFM2P0DMQ5 153 aa9□□□□□ -0.97
CCNE1-202ENST00000357943 HIGD2AQ9BW72 106 aa9□□□□□ -0.97
CCNE1-202ENST00000357943 ELOF1P60002 83 aaKnown RBP8.99□□□□□ -0.97
CCNE1-202ENST00000357943 SMCR5Q8TEV8 140 aa8.99□□□□□ -0.97
CCNE1-202ENST00000357943 Q9BRP9 147 aa8.99□□□□□ -0.97
CCNE1-202ENST00000357943 COX7BP24311 80 aa8.98□□□□□ -0.97
CCNE1-202ENST00000357943 CLEC2BQ92478 149 aa8.98□□□□□ -0.97
CCNE1-202ENST00000357943 SMCPP49901 116 aaPredicted RBP8.97□□□□□ -0.97
CCNE1-202ENST00000357943 ATXN8Q156A1 80 aa8.97□□□□□ -0.97
CCNE1-202ENST00000357943 TRBV7-6A0A0J9YX20 115 aa8.96□□□□□ -0.98
CCNE1-202ENST00000357943 ERC2-IT1O76042 136 aa8.96□□□□□ -0.98
CCNE1-202ENST00000357943 FLG2Q5D862 2391 aaPredicted RBP8.96□□□□□ -0.98
CCNE1-202ENST00000357943 LST1O00453 97 aa8.95□□□□□ -0.98
CCNE1-202ENST00000357943 H0YGX0 51 aa8.94□□□□□ -0.98
CCNE1-202ENST00000357943 TNXBP22105 4242 aa8.94□□□□□ -0.98
CCNE1-202ENST00000357943 SLC25A20O43772 301 aa8.94□□□□□ -0.98
CCNE1-202ENST00000357943 FAM218AQ96MZ4 157 aa8.94□□□□□ -0.98
CCNE1-202ENST00000357943 CDIP1Q9H305 208 aa8.94□□□□□ -0.98
CCNE1-202ENST00000357943 KRTAP1-4P0C5Y4 121 aa8.92□□□□□ -0.98
CCNE1-202ENST00000357943 DHRS4-AS1Q9P1J3 65 aa8.92□□□□□ -0.98
CCNE1-202ENST00000357943 ANKRD29Q8N6D5 301 aa8.91□□□□□ -0.98
CCNE1-202ENST00000357943 TRACP01848 142 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 226 ms