RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 LINC00308Q8TCZ7 52 aa8.2□□□□□ -1.1
UPK3BL1-201ENST00000340457 NDUFC2-KCTD14E9PQ53 114 aa8.19□□□□□ -1.1
UPK3BL1-201ENST00000340457 C9orf129Q5T035 196 aaKnown RBP8.19□□□□□ -1.1
UPK3BL1-201ENST00000340457 MUSTN1Q8IVN3 82 aa8.19□□□□□ -1.1
UPK3BL1-201ENST00000340457 SNHG12Q9BXW3 62 aa8.19□□□□□ -1.1
UPK3BL1-201ENST00000340457 LBHQ53QV2 105 aaPredicted RBP8.18□□□□□ -1.1
UPK3BL1-201ENST00000340457 NHP2Q9NX24 153 aaKnown RBP8.18□□□□□ -1.1
UPK3BL1-201ENST00000340457 A4D1N5 150 aa8.16□□□□□ -1.1
UPK3BL1-201ENST00000340457 COL5A1-AS1Q5SY13 56 aa8.16□□□□□ -1.1
UPK3BL1-201ENST00000340457 SND1-IT1Q9HBX3 110 aa8.16□□□□□ -1.1
UPK3BL1-201ENST00000340457 A0A0B4J2C4 111 aa8.15□□□□□ -1.1
UPK3BL1-201ENST00000340457 ZNF861PO60384 105 aa8.15□□□□□ -1.1
UPK3BL1-201ENST00000340457 LCE2AQ5TA79 106 aaPredicted RBP8.15□□□□□ -1.1
UPK3BL1-201ENST00000340457 SOSTDC1Q6X4U4 206 aa8.15□□□□□ -1.1
UPK3BL1-201ENST00000340457 RAB37Q96AX2 223 aa8.15□□□□□ -1.1
UPK3BL1-201ENST00000340457 LOC107984156A0A0G2JMH3 177 aa8.14□□□□□ -1.11
UPK3BL1-201ENST00000340457 ARL17AQ8IVW1 177 aa8.14□□□□□ -1.11
UPK3BL1-201ENST00000340457 A0A087X002 238 aa8.13□□□□□ -1.11
UPK3BL1-201ENST00000340457 A0A1B0GWB2 263 aa8.13□□□□□ -1.11
UPK3BL1-201ENST00000340457 NDUFC2O95298 119 aa8.13□□□□□ -1.11
UPK3BL1-201ENST00000340457 XAGE1AQ9HD64 81 aa8.12□□□□□ -1.11
UPK3BL1-201ENST00000340457 C22orf24Q9Y442 160 aa8.12□□□□□ -1.11
UPK3BL1-201ENST00000340457 ANAPC11Q9NYG5 84 aa8.11□□□□□ -1.11
UPK3BL1-201ENST00000340457 TRAV13-2A0A0B4J235 113 aa8.1□□□□□ -1.11
UPK3BL1-201ENST00000340457 KRTAP9-6A0A140TA67 174 aa8.1□□□□□ -1.11
UPK3BL1-201ENST00000340457 CFC1BP0CG36 223 aa8.1□□□□□ -1.11
UPK3BL1-201ENST00000340457 CFC1P0CG37 223 aa8.1□□□□□ -1.11
UPK3BL1-201ENST00000340457 RETNLBQ9BQ08 111 aa8.1□□□□□ -1.11
UPK3BL1-201ENST00000340457 K7ERJ3 54 aa8.09□□□□□ -1.11
UPK3BL1-201ENST00000340457 EIF4EBP3O60516 100 aaPredicted RBP8.09□□□□□ -1.11
UPK3BL1-201ENST00000340457 TYMSOSQ8TAI1 123 aa8.09□□□□□ -1.11
UPK3BL1-201ENST00000340457 PRO1854Q9UHT4 67 aa8.09□□□□□ -1.11
UPK3BL1-201ENST00000340457 Q1RN00 199 aa8.08□□□□□ -1.12
UPK3BL1-201ENST00000340457 TRBV10-2A0A0K0K1G8 114 aa8.07□□□□□ -1.12
UPK3BL1-201ENST00000340457 CRYGAP11844 174 aa8.07□□□□□ -1.12
UPK3BL1-201ENST00000340457 NKAPP1Q8N9T2 125 aa8.07□□□□□ -1.12
UPK3BL1-201ENST00000340457 NCR3O14931 201 aa8.06□□□□□ -1.12
UPK3BL1-201ENST00000340457 RPL28P46779 137 aaKnown RBP8.06□□□□□ -1.12
UPK3BL1-201ENST00000340457 LYRM7Q5U5X0 104 aa8.06□□□□□ -1.12
UPK3BL1-201ENST00000340457 CBY1Q9Y3M2 126 aa8.06□□□□□ -1.12
UPK3BL1-201ENST00000340457 IGKV2-28A0A075B6P5 120 aa8.05□□□□□ -1.12
UPK3BL1-201ENST00000340457 RPL37AP8A6NKH3 93 aa8.05□□□□□ -1.12
UPK3BL1-201ENST00000340457 TAX1BP3O14907 124 aa8.05□□□□□ -1.12
UPK3BL1-201ENST00000340457 BCE1O60756 84 aa8.05□□□□□ -1.12
UPK3BL1-201ENST00000340457 IGKV2D-28P01615 120 aa8.05□□□□□ -1.12
UPK3BL1-201ENST00000340457 VPREB1P12018 145 aa8.05□□□□□ -1.12
UPK3BL1-201ENST00000340457 S100A7L2Q5SY68 101 aa8.05□□□□□ -1.12
UPK3BL1-201ENST00000340457 MRPL55Q7Z7F7 128 aaKnown RBP8.05□□□□□ -1.12
UPK3BL1-201ENST00000340457 GAGE10A6NGK3 116 aa8.04□□□□□ -1.12
UPK3BL1-201ENST00000340457 C9orf118A6NHY6 69 aa8.04□□□□□ -1.12
UPK3BL1-201ENST00000340457 KRTAP13-2Q52LG2 175 aa8.04□□□□□ -1.12
UPK3BL1-201ENST00000340457 OR13C6PQ8NH95 151 aa8.04□□□□□ -1.12
UPK3BL1-201ENST00000340457 IGLV5-37A0A075B6J1 123 aa8.03□□□□□ -1.12
UPK3BL1-201ENST00000340457 H7C2G1 150 aa8.03□□□□□ -1.12
UPK3BL1-201ENST00000340457 LINC00337Q8N6G1 96 aa8.03□□□□□ -1.12
UPK3BL1-201ENST00000340457 TMEM126AQ9H061 195 aa8.03□□□□□ -1.12
UPK3BL1-201ENST00000340457 M0R378 163 aa8.03□□□□□ -1.12
UPK3BL1-201ENST00000340457 LINC00167Q96N53 147 aa8.03□□□□□ -1.12
UPK3BL1-201ENST00000340457 MUC17Q685J3 4493 aa8.02□□□□□ -1.13
UPK3BL1-201ENST00000340457 H3BUT2 72 aa8.02□□□□□ -1.13
UPK3BL1-201ENST00000340457 PSMB2P49721 201 aa8.02□□□□□ -1.13
UPK3BL1-201ENST00000340457 CDIP1Q9H305 208 aa8.02□□□□□ -1.13
UPK3BL1-201ENST00000340457 COX6CP09669 75 aa8.01□□□□□ -1.13
UPK3BL1-201ENST00000340457 Q8NDZ9 215 aa8.01□□□□□ -1.13
UPK3BL1-201ENST00000340457 FABP2P12104 132 aa8□□□□□ -1.13
UPK3BL1-201ENST00000340457 LINC00304Q8N9R0 145 aa8□□□□□ -1.13
UPK3BL1-201ENST00000340457 A0A1W2PPM0 123 aa7.99□□□□□ -1.13
UPK3BL1-201ENST00000340457 IGLV6-57P01721 117 aa7.99□□□□□ -1.13
UPK3BL1-201ENST00000340457 UBE2AP49459 152 aa7.99□□□□□ -1.13
UPK3BL1-201ENST00000340457 IGLV7-46A0A075B6I9 117 aa7.98□□□□□ -1.13
UPK3BL1-201ENST00000340457 TRAV23DV6A0A075B6W5 121 aa7.98□□□□□ -1.13
UPK3BL1-201ENST00000340457 TRBV10-3A0A0K0K1G6 114 aa7.98□□□□□ -1.13
UPK3BL1-201ENST00000340457 NAA38Q9BRA0 125 aaKnown RBP7.98□□□□□ -1.13
UPK3BL1-201ENST00000340457 TRIAP1O43715 76 aa7.97□□□□□ -1.13
UPK3BL1-201ENST00000340457 SCGB1C2P0DMR2 95 aa7.97□□□□□ -1.13
UPK3BL1-201ENST00000340457 KRTAP13-1Q8IUC0 172 aa7.97□□□□□ -1.13
UPK3BL1-201ENST00000340457 SMIM11BQ8TCY0 68 aa7.97□□□□□ -1.13
UPK3BL1-201ENST00000340457 PRYO14603 147 aa7.96□□□□□ -1.14
UPK3BL1-201ENST00000340457 TPRXLQ17RH7 258 aa7.96□□□□□ -1.14
UPK3BL1-201ENST00000340457 VAMP3Q15836 100 aa7.95□□□□□ -1.14
UPK3BL1-201ENST00000340457 SPCS1Q9Y6A9 102 aa7.95□□□□□ -1.14
UPK3BL1-201ENST00000340457 A0A1B0GV90 55 aa7.94□□□□□ -1.14
UPK3BL1-201ENST00000340457 PRLHP81277 87 aa7.94□□□□□ -1.14
UPK3BL1-201ENST00000340457 FAM229BQ4G0N7 80 aa7.94□□□□□ -1.14
UPK3BL1-201ENST00000340457 GTF2H5Q6ZYL4 71 aa7.94□□□□□ -1.14
UPK3BL1-201ENST00000340457 TRBV20-1A0A075B6N2 111 aa7.93□□□□□ -1.14
UPK3BL1-201ENST00000340457 ZNF73O43830 326 aaPredicted RBP7.93□□□□□ -1.14
UPK3BL1-201ENST00000340457 H0YGX0 51 aa7.92□□□□□ -1.14
UPK3BL1-201ENST00000340457 K7EP34 96 aa7.92□□□□□ -1.14
UPK3BL1-201ENST00000340457 C6orf99Q4VX62 202 aa7.92□□□□□ -1.14
UPK3BL1-201ENST00000340457 KCNQ1DNQ9H478 68 aa7.92□□□□□ -1.14
UPK3BL1-201ENST00000340457 TRBV7-6A0A0J9YX20 115 aa7.91□□□□□ -1.14
UPK3BL1-201ENST00000340457 SNCGO76070 127 aa7.91□□□□□ -1.14
UPK3BL1-201ENST00000340457 ATXN8Q156A1 80 aa7.91□□□□□ -1.14
UPK3BL1-201ENST00000340457 C3orf22Q8N5N4 141 aa7.91□□□□□ -1.14
UPK3BL1-201ENST00000340457 FAM19A1Q7Z5A9 133 aa7.9□□□□□ -1.14
UPK3BL1-201ENST00000340457 ETDCA0A1B0GVM5 59 aa7.88□□□□□ -1.15
UPK3BL1-201ENST00000340457 A0A1B0GX51 115 aa7.88□□□□□ -1.15
UPK3BL1-201ENST00000340457 LST1O00453 97 aa7.88□□□□□ -1.15
UPK3BL1-201ENST00000340457 TCL1BO95988 128 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms