RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 LEPROTO15243 131 aa8.14□□□□□ -1.11
SIRPB3P-201ENST00000340424 ZNF22P17026 224 aaPredicted RBP8.14□□□□□ -1.11
SIRPB3P-201ENST00000340424 C22orf24Q9Y442 160 aa8.14□□□□□ -1.11
SIRPB3P-201ENST00000340424 KRTAP10-8P60410 259 aa8.13□□□□□ -1.11
SIRPB3P-201ENST00000340424 KRTAP11-1Q8IUC1 163 aa8.13□□□□□ -1.11
SIRPB3P-201ENST00000340424 PLEKHB2Q96CS7 222 aa8.13□□□□□ -1.11
SIRPB3P-201ENST00000340424 H0Y9J4 135 aa8.12□□□□□ -1.11
SIRPB3P-201ENST00000340424 J3QQQ9 107 aa8.12□□□□□ -1.11
SIRPB3P-201ENST00000340424 J3QR89 54 aa8.12□□□□□ -1.11
SIRPB3P-201ENST00000340424 SCGB1D4Q6XE38 83 aa8.12□□□□□ -1.11
SIRPB3P-201ENST00000340424 MRPL55Q7Z7F7 128 aaKnown RBP8.12□□□□□ -1.11
SIRPB3P-201ENST00000340424 TSPEAR-AS2P59090 65 aa8.11□□□□□ -1.11
SIRPB3P-201ENST00000340424 COX17Q14061 63 aa8.11□□□□□ -1.11
SIRPB3P-201ENST00000340424 TSPAN13O95857 204 aa8.1□□□□□ -1.11
SIRPB3P-201ENST00000340424 SCGB1A1P11684 91 aa8.1□□□□□ -1.11
SIRPB3P-201ENST00000340424 TMEM170BQ5T4T1 132 aa8.1□□□□□ -1.11
SIRPB3P-201ENST00000340424 IGLV5-37A0A075B6J1 123 aa8.09□□□□□ -1.11
SIRPB3P-201ENST00000340424 TRBV20-1A0A075B6N2 111 aa8.09□□□□□ -1.11
SIRPB3P-201ENST00000340424 A0A0B4J2C4 111 aa8.09□□□□□ -1.11
SIRPB3P-201ENST00000340424 LGALS3P17931 250 aaKnown RBP8.09□□□□□ -1.11
SIRPB3P-201ENST00000340424 H3BMG7 143 aa8.08□□□□□ -1.12
SIRPB3P-201ENST00000340424 ZNF861PO60384 105 aa8.08□□□□□ -1.12
SIRPB3P-201ENST00000340424 NKAPP1Q8N9T2 125 aa8.08□□□□□ -1.12
SIRPB3P-201ENST00000340424 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
SIRPB3P-201ENST00000340424 IGLV1-50A0A075B6I6 118 aa8.07□□□□□ -1.12
SIRPB3P-201ENST00000340424 RPL24P83731 157 aaKnown RBP8.07□□□□□ -1.12
SIRPB3P-201ENST00000340424 UBR4Q5T4S7 5183 aa8.07□□□□□ -1.12
SIRPB3P-201ENST00000340424 TMEM238C9JI98 176 aa8.06□□□□□ -1.12
SIRPB3P-201ENST00000340424 BCE1O60756 84 aa8.06□□□□□ -1.12
SIRPB3P-201ENST00000340424 CFC1BP0CG36 223 aa8.06□□□□□ -1.12
SIRPB3P-201ENST00000340424 CFC1P0CG37 223 aa8.06□□□□□ -1.12
SIRPB3P-201ENST00000340424 PFN2P35080 140 aa8.06□□□□□ -1.12
SIRPB3P-201ENST00000340424 ZNF625Q96I27 306 aaPredicted RBP8.06□□□□□ -1.12
SIRPB3P-201ENST00000340424 LINC00167Q96N53 147 aa8.06□□□□□ -1.12
SIRPB3P-201ENST00000340424 TIMM17BO60830 172 aa8.05□□□□□ -1.12
SIRPB3P-201ENST00000340424 RPL28P46779 137 aaKnown RBP8.05□□□□□ -1.12
SIRPB3P-201ENST00000340424 SPANXDQ9BXN6 97 aa8.05□□□□□ -1.12
SIRPB3P-201ENST00000340424 SPANXCQ9NY87 97 aa8.05□□□□□ -1.12
SIRPB3P-201ENST00000340424 PRO1854Q9UHT4 67 aa8.05□□□□□ -1.12
SIRPB3P-201ENST00000340424 RPL13AP40429 203 aaKnown RBP8.04□□□□□ -1.12
SIRPB3P-201ENST00000340424 KRTAP19-4Q3LI73 84 aa8.04□□□□□ -1.12
SIRPB3P-201ENST00000340424 SND1-IT1Q9HBX3 110 aa8.04□□□□□ -1.12
SIRPB3P-201ENST00000340424 A0A0J9YXY3 114 aa8.03□□□□□ -1.12
SIRPB3P-201ENST00000340424 KRTAP1-4P0C5Y4 121 aa8.03□□□□□ -1.12
SIRPB3P-201ENST00000340424 ETDBQ3ZM63 59 aa8.03□□□□□ -1.12
SIRPB3P-201ENST00000340424 LITAFQ99732 161 aa8.03□□□□□ -1.12
SIRPB3P-201ENST00000340424 RPL37AP8A6NKH3 93 aa8.02□□□□□ -1.13
SIRPB3P-201ENST00000340424 PRR26Q8N8Z3 221 aa8.02□□□□□ -1.13
SIRPB3P-201ENST00000340424 PPDPFQ9H3Y8 114 aa8.02□□□□□ -1.13
SIRPB3P-201ENST00000340424 LRP2P98164 4655 aa8.02□□□□□ -1.13
SIRPB3P-201ENST00000340424 A4D1N5 150 aa8.01□□□□□ -1.13
SIRPB3P-201ENST00000340424 VPREB1P12018 145 aa8.01□□□□□ -1.13
SIRPB3P-201ENST00000340424 HERV-K104P63124 156 aa8.01□□□□□ -1.13
SIRPB3P-201ENST00000340424 TEN1Q86WV5 123 aa8.01□□□□□ -1.13
SIRPB3P-201ENST00000340424 PPDPFLQ8WWR9 84 aa8.01□□□□□ -1.13
SIRPB3P-201ENST00000340424 SIGMAR1Q99720 223 aa8.01□□□□□ -1.13
SIRPB3P-201ENST00000340424 TCL1BO95988 128 aa8□□□□□ -1.13
SIRPB3P-201ENST00000340424 LOC107984156A0A0G2JMH3 177 aa7.99□□□□□ -1.13
SIRPB3P-201ENST00000340424 IFITM1P13164 125 aa7.99□□□□□ -1.13
SIRPB3P-201ENST00000340424 LINC00158P58513 81 aa7.99□□□□□ -1.13
SIRPB3P-201ENST00000340424 ARL17AQ8IVW1 177 aa7.99□□□□□ -1.13
SIRPB3P-201ENST00000340424 IGKV2-28A0A075B6P5 120 aa7.98□□□□□ -1.13
SIRPB3P-201ENST00000340424 IGKV2D-28P01615 120 aa7.98□□□□□ -1.13
SIRPB3P-201ENST00000340424 UBE2AP49459 152 aa7.98□□□□□ -1.13
SIRPB3P-201ENST00000340424 PSMB2P49721 201 aa7.98□□□□□ -1.13
SIRPB3P-201ENST00000340424 MUSTN1Q8IVN3 82 aa7.98□□□□□ -1.13
SIRPB3P-201ENST00000340424 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
SIRPB3P-201ENST00000340424 KRTAP13-1Q8IUC0 172 aa7.97□□□□□ -1.13
SIRPB3P-201ENST00000340424 NDUFA12Q9UI09 145 aa7.97□□□□□ -1.13
SIRPB3P-201ENST00000340424 MEIG1Q5JSS6 88 aa7.96□□□□□ -1.14
SIRPB3P-201ENST00000340424 TMEM126AQ9H061 195 aa7.95□□□□□ -1.14
SIRPB3P-201ENST00000340424 M0R378 163 aa7.94□□□□□ -1.14
SIRPB3P-201ENST00000340424 CRYGAP11844 174 aa7.94□□□□□ -1.14
SIRPB3P-201ENST00000340424 ATXN8Q156A1 80 aa7.94□□□□□ -1.14
SIRPB3P-201ENST00000340424 SLC25A20O43772 301 aa7.93□□□□□ -1.14
SIRPB3P-201ENST00000340424 MTURNQ8N3F0 131 aa7.93□□□□□ -1.14
SIRPB3P-201ENST00000340424 Q8NDZ9 215 aa7.93□□□□□ -1.14
SIRPB3P-201ENST00000340424 COPS9Q8WXC6 57 aa7.93□□□□□ -1.14
SIRPB3P-201ENST00000340424 A0A0U1RRA0 63 aa7.92□□□□□ -1.14
SIRPB3P-201ENST00000340424 SCGB1C2P0DMR2 95 aa7.92□□□□□ -1.14
SIRPB3P-201ENST00000340424 FAM229BQ4G0N7 80 aa7.92□□□□□ -1.14
SIRPB3P-201ENST00000340424 ADAMTSL4-AS1Q5T5F5 129 aa7.92□□□□□ -1.14
SIRPB3P-201ENST00000340424 FAM19A1Q7Z5A9 133 aa7.92□□□□□ -1.14
SIRPB3P-201ENST00000340424 MIR7-3HGQ8N6C7 128 aa7.92□□□□□ -1.14
SIRPB3P-201ENST00000340424 ANKRD29Q8N6D5 301 aa7.92□□□□□ -1.14
SIRPB3P-201ENST00000340424 TRBV10-2A0A0K0K1G8 114 aa7.91□□□□□ -1.14
SIRPB3P-201ENST00000340424 H3BT86 120 aa7.91□□□□□ -1.14
SIRPB3P-201ENST00000340424 TRIAP1O43715 76 aa7.9□□□□□ -1.14
SIRPB3P-201ENST00000340424 A0A087X002 238 aa7.89□□□□□ -1.15
SIRPB3P-201ENST00000340424 C9JAW5 83 aa7.89□□□□□ -1.15
SIRPB3P-201ENST00000340424 PRYO14603 147 aa7.89□□□□□ -1.15
SIRPB3P-201ENST00000340424 COX6CP09669 75 aa7.89□□□□□ -1.15
SIRPB3P-201ENST00000340424 PRLHP81277 87 aa7.89□□□□□ -1.15
SIRPB3P-201ENST00000340424 TYMSOSQ8TAI1 123 aa7.89□□□□□ -1.15
SIRPB3P-201ENST00000340424 LST1O00453 97 aa7.87□□□□□ -1.15
SIRPB3P-201ENST00000340424 Q1RN00 199 aa7.87□□□□□ -1.15
SIRPB3P-201ENST00000340424 KCNQ1DNQ9H478 68 aa7.87□□□□□ -1.15
SIRPB3P-201ENST00000340424 LINC00337Q8N6G1 96 aa7.86□□□□□ -1.15
SIRPB3P-201ENST00000340424 LINC00308Q8TCZ7 52 aa7.86□□□□□ -1.15
SIRPB3P-201ENST00000340424 LPAP08519 4548 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms