RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 LOC400499M0QZD8 3231 aa7.61□□□□□ -1.19
PCDHGC3-201ENST00000308177 ITPR1Q14643 2758 aa7.61□□□□□ -1.19
PCDHGC3-201ENST00000308177 C16orf90A8MZG2 172 aa7.6□□□□□ -1.19
PCDHGC3-201ENST00000308177 CXCL6P80162 114 aa7.6□□□□□ -1.19
PCDHGC3-201ENST00000308177 C15orf56Q8N910 161 aa7.6□□□□□ -1.19
PCDHGC3-201ENST00000308177 FAM104AQ969W3 186 aa7.6□□□□□ -1.19
PCDHGC3-201ENST00000308177 Q6ZQT0 140 aa7.6□□□□□ -1.19
PCDHGC3-201ENST00000308177 DEFB116Q30KQ4 102 aa7.59□□□□□ -1.19
PCDHGC3-201ENST00000308177 CIRBP-AS1Q8TBR5 109 aa7.59□□□□□ -1.19
PCDHGC3-201ENST00000308177 TM2D3Q9BRN9 247 aa7.58□□□□□ -1.2
PCDHGC3-201ENST00000308177 LOC110117498A0A087WWA1 95 aa7.58□□□□□ -1.2
PCDHGC3-201ENST00000308177 PHF5AQ7RTV0 110 aaKnown RBP7.58□□□□□ -1.2
PCDHGC3-201ENST00000308177 Q8N9L7 120 aa7.58□□□□□ -1.2
PCDHGC3-201ENST00000308177 CFAP47Q6ZTR5 3102 aa7.57□□□□□ -1.2
PCDHGC3-201ENST00000308177 SERTAD4-AS1Q5TG53 156 aa7.57□□□□□ -1.2
PCDHGC3-201ENST00000308177 NBEAL2Q6ZNJ1 2754 aa7.57□□□□□ -1.2
PCDHGC3-201ENST00000308177 FAM168BA1KXE4 195 aa7.56□□□□□ -1.2
PCDHGC3-201ENST00000308177 BCE1O60756 84 aa7.56□□□□□ -1.2
PCDHGC3-201ENST00000308177 CHTF8P0CG12 524 aa7.56□□□□□ -1.2
PCDHGC3-201ENST00000308177 PRR4Q16378 134 aa7.56□□□□□ -1.2
PCDHGC3-201ENST00000308177 ST20-AS1Q8NBB2 130 aa7.56□□□□□ -1.2
PCDHGC3-201ENST00000308177 ITPR2Q14571 2701 aa7.55□□□□□ -1.2
PCDHGC3-201ENST00000308177 WIPF1O43516 503 aa7.54□□□□□ -1.2
PCDHGC3-201ENST00000308177 CASC2Q6XLA1 102 aa7.54□□□□□ -1.2
PCDHGC3-201ENST00000308177 KCNQ1DNQ9H478 68 aa7.54□□□□□ -1.2
PCDHGC3-201ENST00000308177 V9GYY9 64 aa7.54□□□□□ -1.2
PCDHGC3-201ENST00000308177 Q8NBF4 154 aa7.54□□□□□ -1.2
PCDHGC3-201ENST00000308177 MPLKIPQ8TAP9 179 aa7.54□□□□□ -1.2
PCDHGC3-201ENST00000308177 LINC00208Q96KT6 92 aa7.54□□□□□ -1.2
PCDHGC3-201ENST00000308177 LINC00528Q8N1L1 170 aa7.53□□□□□ -1.2
PCDHGC3-201ENST00000308177 UTP20O75691 2785 aaKnown RBP7.53□□□□□ -1.2
PCDHGC3-201ENST00000308177 IGHV6-1A0A0B4J1U7 121 aa7.53□□□□□ -1.2
PCDHGC3-201ENST00000308177 A0A1B0GW54 56 aa7.53□□□□□ -1.2
PCDHGC3-201ENST00000308177 EPM2AB3EWF7 344 aa7.53□□□□□ -1.2
PCDHGC3-201ENST00000308177 IGLV1-50A0A075B6I6 118 aa7.52□□□□□ -1.21
PCDHGC3-201ENST00000308177 RTL8CO15255 209 aa7.52□□□□□ -1.21
PCDHGC3-201ENST00000308177 LINC00476Q8WZB0 136 aa7.52□□□□□ -1.21
PCDHGC3-201ENST00000308177 SMIM26A0A096LP01 95 aa7.52□□□□□ -1.21
PCDHGC3-201ENST00000308177 SERP1Q9Y6X1 66 aa7.52□□□□□ -1.21
PCDHGC3-201ENST00000308177 HCG22E2RYF7 251 aa7.52□□□□□ -1.21
PCDHGC3-201ENST00000308177 C9orf129Q5T035 196 aaKnown RBP7.51□□□□□ -1.21
PCDHGC3-201ENST00000308177 TMEM254Q8TBM7 123 aa7.51□□□□□ -1.21
PCDHGC3-201ENST00000308177 SEC61GP60059 68 aa7.51□□□□□ -1.21
PCDHGC3-201ENST00000308177 TLX1NBP0CAT3 122 aa7.49□□□□□ -1.21
PCDHGC3-201ENST00000308177 CRYGAP11844 174 aa7.49□□□□□ -1.21
PCDHGC3-201ENST00000308177 CASC10Q5T4H9 136 aa7.48□□□□□ -1.21
PCDHGC3-201ENST00000308177 BAHCC1Q9P281 2608 aa7.48□□□□□ -1.21
PCDHGC3-201ENST00000308177 MOBPQ13875 183 aa7.47□□□□□ -1.21
PCDHGC3-201ENST00000308177 ZANQ9Y493 2812 aa7.47□□□□□ -1.21
PCDHGC3-201ENST00000308177 WDFY3Q8IZQ1 3526 aa7.47□□□□□ -1.21
PCDHGC3-201ENST00000308177 SMIM29Q86T20 159 aa7.47□□□□□ -1.21
PCDHGC3-201ENST00000308177 RPS28P62857 69 aaKnown RBP7.46□□□□□ -1.22
PCDHGC3-201ENST00000308177 BRK1Q8WUW1 75 aa7.46□□□□□ -1.22
PCDHGC3-201ENST00000308177 WWC2-AS2Q96NR7 200 aa7.46□□□□□ -1.22
PCDHGC3-201ENST00000308177 PLA2G2DQ9UNK4 145 aa7.45□□□□□ -1.22
PCDHGC3-201ENST00000308177 H0Y9P7 68 aa7.44□□□□□ -1.22
PCDHGC3-201ENST00000308177 APCP25054 2843 aa7.44□□□□□ -1.22
PCDHGC3-201ENST00000308177 APLNQ9ULZ1 77 aa7.44□□□□□ -1.22
PCDHGC3-201ENST00000308177 C9orf163Q8N9P6 203 aa7.44□□□□□ -1.22
PCDHGC3-201ENST00000308177 TRBV7-4A0A0J9YYF1 115 aa7.43□□□□□ -1.22
PCDHGC3-201ENST00000308177 Q8N377 158 aa7.43□□□□□ -1.22
PCDHGC3-201ENST00000308177 NBEAL1Q6ZS30 2694 aa7.42□□□□□ -1.22
PCDHGC3-201ENST00000308177 LINC01600Q96MT4 127 aa7.41□□□□□ -1.22
PCDHGC3-201ENST00000308177 HRNRQ86YZ3 2850 aaPredicted RBP7.4□□□□□ -1.22
PCDHGC3-201ENST00000308177 PCOTHQ58A44 107 aa7.4□□□□□ -1.22
PCDHGC3-201ENST00000308177 A0A087WTM6 91 aa7.39□□□□□ -1.23
PCDHGC3-201ENST00000308177 LIMD2Q9BT23 127 aa7.39□□□□□ -1.23
PCDHGC3-201ENST00000308177 CNBPP62633 177 aaKnown RBP7.39□□□□□ -1.23
PCDHGC3-201ENST00000308177 NSD1Q96L73 2696 aaPredicted RBP7.38□□□□□ -1.23
PCDHGC3-201ENST00000308177 A0A1W2PNN7 141 aa7.38□□□□□ -1.23
PCDHGC3-201ENST00000308177 HIVEP1P15822 2718 aa7.38□□□□□ -1.23
PCDHGC3-201ENST00000308177 hDV103S1A0JD37 113 aa7.37□□□□□ -1.23
PCDHGC3-201ENST00000308177 C1orf64Q8NEQ6 169 aa7.37□□□□□ -1.23
PCDHGC3-201ENST00000308177 IGFL1Q6UW32 110 aa7.36□□□□□ -1.23
PCDHGC3-201ENST00000308177 RPL37AP61513 92 aaKnown RBP7.36□□□□□ -1.23
PCDHGC3-201ENST00000308177 RETNLBQ9BQ08 111 aa7.36□□□□□ -1.23
PCDHGC3-201ENST00000308177 ERC2-IT1O76042 136 aa7.35□□□□□ -1.23
PCDHGC3-201ENST00000308177 SPACA4Q8TDM5 124 aa7.34□□□□□ -1.23
PCDHGC3-201ENST00000308177 IGLV5-37A0A075B6J1 123 aa7.34□□□□□ -1.23
PCDHGC3-201ENST00000308177 K7EQZ3 153 aa7.34□□□□□ -1.23
PCDHGC3-201ENST00000308177 OBSCN-AS1Q96MR7 158 aa7.34□□□□□ -1.23
PCDHGC3-201ENST00000308177 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
PCDHGC3-201ENST00000308177 TP53AIP1Q9HCN2 124 aa7.33□□□□□ -1.24
PCDHGC3-201ENST00000308177 MUC3AQ02505 3323 aa7.33□□□□□ -1.24
PCDHGC3-201ENST00000308177 ASH1LQ9NR48 2969 aaKnown RBP7.32□□□□□ -1.24
PCDHGC3-201ENST00000308177 A0A0G2JQZ4 141 aa7.32□□□□□ -1.24
PCDHGC3-201ENST00000308177 ZNF861PO60384 105 aa7.31□□□□□ -1.24
PCDHGC3-201ENST00000308177 Q8NDZ9 215 aa7.31□□□□□ -1.24
PCDHGC3-201ENST00000308177 A8MWP4 228 aa7.3□□□□□ -1.24
PCDHGC3-201ENST00000308177 PRR15LQ9BU68 103 aa7.3□□□□□ -1.24
PCDHGC3-201ENST00000308177 CRYBG3Q68DQ2 2970 aa7.3□□□□□ -1.24
PCDHGC3-201ENST00000308177 A6NED7 52 aa7.3□□□□□ -1.24
PCDHGC3-201ENST00000308177 A0A1W2PNM2 257 aa7.29□□□□□ -1.24
PCDHGC3-201ENST00000308177 CELSR2Q9HCU4 2923 aa7.28□□□□□ -1.24
PCDHGC3-201ENST00000308177 NIPBLQ6KC79 2804 aaeCLIP7.28□□□□□ -1.24
PCDHGC3-201ENST00000308177 NF1P21359 2839 aa7.28□□□□□ -1.24
PCDHGC3-201ENST00000308177 IGLV5-48A0A075B6I7 105 aa7.28□□□□□ -1.24
PCDHGC3-201ENST00000308177 TRAV22A0A0B4J277 110 aa7.28□□□□□ -1.24
PCDHGC3-201ENST00000308177 TYMSOSQ8TAI1 123 aa7.28□□□□□ -1.24
PCDHGC3-201ENST00000308177 A0A0U1RQV1 116 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms