RNA–Protein interactions for RNA: ENST00000302328.7

SCN11A-201, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN11A, Length 6,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-201ENST00000302328 M0R2T5 61 aa5.46□□□□□ -1.53
SCN11A-201ENST00000302328 Q6ZSA8 131 aa5.46□□□□□ -1.54
SCN11A-201ENST00000302328 KRTAP21-3Q3LHN1 58 aa5.46□□□□□ -1.54
SCN11A-201ENST00000302328 MYO18BQ8IUG5 2567 aa5.45□□□□□ -1.54
SCN11A-201ENST00000302328 PRR26Q8N8Z3 221 aa5.45□□□□□ -1.54
SCN11A-201ENST00000302328 TMEM254Q8TBM7 123 aa5.45□□□□□ -1.54
SCN11A-201ENST00000302328 FASNP49327 2511 aaKnown RBP5.45□□□□□ -1.54
SCN11A-201ENST00000302328 CEP295Q9C0D2 2601 aa5.45□□□□□ -1.54
SCN11A-201ENST00000302328 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.45□□□□□ -1.54
SCN11A-201ENST00000302328 FN1P02751 2386 aaKnown RBP5.44□□□□□ -1.54
SCN11A-201ENST00000302328 A0A0U1RQV1 116 aa5.43□□□□□ -1.54
SCN11A-201ENST00000302328 A0A1B0GU69 56 aa5.43□□□□□ -1.54
SCN11A-201ENST00000302328 LITAFQ99732 161 aa5.42□□□□□ -1.54
SCN11A-201ENST00000302328 LOC101927531A0A1B0GV80 90 aa5.42□□□□□ -1.54
SCN11A-201ENST00000302328 A0A1B0GVX0 72 aa5.42□□□□□ -1.54
SCN11A-201ENST00000302328 H3BPC8 53 aa5.41□□□□□ -1.54
SCN11A-201ENST00000302328 C8orf17Q9NRJ1 99 aa5.41□□□□□ -1.54
SCN11A-201ENST00000302328 C2CD3Q4AC94 2353 aa5.41□□□□□ -1.54
SCN11A-201ENST00000302328 MUC4Q99102 2169 aa5.41□□□□□ -1.54
SCN11A-201ENST00000302328 PLAC8Q9NZF1 115 aa5.4□□□□□ -1.54
SCN11A-201ENST00000302328 Q8N377 158 aa5.4□□□□□ -1.54
SCN11A-201ENST00000302328 C5orf42Q9H799 3197 aa5.4□□□□□ -1.54
SCN11A-201ENST00000302328 CCDC179H3BU77 68 aa5.4□□□□□ -1.55
SCN11A-201ENST00000302328 K7EQZ3 153 aa5.39□□□□□ -1.55
SCN11A-201ENST00000302328 A0A0G2JQZ4 141 aa5.38□□□□□ -1.55
SCN11A-201ENST00000302328 FAM229BQ4G0N7 80 aa5.37□□□□□ -1.55
SCN11A-201ENST00000302328 ERC2-IT1O76042 136 aa5.37□□□□□ -1.55
SCN11A-201ENST00000302328 CD164Q04900 197 aa5.37□□□□□ -1.55
SCN11A-201ENST00000302328 PRR15Q8IV56 129 aa5.35□□□□□ -1.55
SCN11A-201ENST00000302328 CEP350Q5VT06 3117 aa5.35□□□□□ -1.55
SCN11A-201ENST00000302328 KRTAP10-1P60331 282 aa5.34□□□□□ -1.55
SCN11A-201ENST00000302328 SMIM26A0A096LP01 95 aa5.34□□□□□ -1.55
SCN11A-201ENST00000302328 OXTP01178 125 aa5.34□□□□□ -1.56
SCN11A-201ENST00000302328 KRTAP10-2P60368 255 aa5.34□□□□□ -1.56
SCN11A-201ENST00000302328 POLQO75417 2590 aa5.33□□□□□ -1.56
SCN11A-201ENST00000302328 PSPHP1O15172 72 aa5.33□□□□□ -1.56
SCN11A-201ENST00000302328 USP9XQ93008 2570 aaPredicted RBP5.33□□□□□ -1.56
SCN11A-201ENST00000302328 ACANP16112 2415 aa5.33□□□□□ -1.56
SCN11A-201ENST00000302328 MYO9AB2RTY4 2548 aa5.33□□□□□ -1.56
SCN11A-201ENST00000302328 IGLV8-61A0A075B6I0 122 aa5.32□□□□□ -1.56
SCN11A-201ENST00000302328 SEC61BP60468 96 aaKnown RBP5.31□□□□□ -1.56
SCN11A-201ENST00000302328 TLN2Q9Y4G6 2542 aa5.31□□□□□ -1.56
SCN11A-201ENST00000302328 CHD7Q9P2D1 2997 aa5.31□□□□□ -1.56
SCN11A-201ENST00000302328 KRTAP1-5Q9BYS1 174 aa5.29□□□□□ -1.56
SCN11A-201ENST00000302328 HTTP42858 3142 aa5.28□□□□□ -1.56
SCN11A-201ENST00000302328 HECTD1Q9ULT8 2610 aa5.28□□□□□ -1.56
SCN11A-201ENST00000302328 EIF4EBP3O60516 100 aaPredicted RBP5.28□□□□□ -1.56
SCN11A-201ENST00000302328 SMCPP49901 116 aaPredicted RBP5.28□□□□□ -1.56
SCN11A-201ENST00000302328 LINC01554Q52M75 96 aa5.27□□□□□ -1.57
SCN11A-201ENST00000302328 EPG5Q9HCE0 2579 aa5.26□□□□□ -1.57
SCN11A-201ENST00000302328 IGLV5-48A0A075B6I7 105 aa5.25□□□□□ -1.57
SCN11A-201ENST00000302328 Q8N1X5 172 aa5.24□□□□□ -1.57
SCN11A-201ENST00000302328 CHD9Q3L8U1 2897 aa5.24□□□□□ -1.57
SCN11A-201ENST00000302328 Q6ZR54 194 aa5.23□□□□□ -1.57
SCN11A-201ENST00000302328 USP9YO00507 2555 aaPredicted RBP5.23□□□□□ -1.57
SCN11A-201ENST00000302328 A0A1W2PNM2 257 aa5.22□□□□□ -1.57
SCN11A-201ENST00000302328 PRO0461Q9UI25 63 aa5.22□□□□□ -1.57
SCN11A-201ENST00000302328 MTORP42345 2549 aa5.21□□□□□ -1.57
SCN11A-201ENST00000302328 PCNTO95613 3336 aa5.21□□□□□ -1.57
SCN11A-201ENST00000302328 COA5Q86WW8 74 aa5.21□□□□□ -1.58
SCN11A-201ENST00000302328 HELZ2Q9BYK8 2649 aaKnown RBP5.21□□□□□ -1.58
SCN11A-201ENST00000302328 PMAIP1Q13794 54 aa5.21□□□□□ -1.58
SCN11A-201ENST00000302328 LINC01600Q96MT4 127 aa5.19□□□□□ -1.58
SCN11A-201ENST00000302328 S4R3F8 94 aa5.19□□□□□ -1.58
SCN11A-201ENST00000302328 FP248Q71RG6 208 aaPredicted RBP5.17□□□□□ -1.58
SCN11A-201ENST00000302328 ZCCHC13Q8WW36 166 aaKnown RBP5.17□□□□□ -1.58
SCN11A-201ENST00000302328 MKI67P46013 3256 aaKnown RBP5.17□□□□□ -1.58
SCN11A-201ENST00000302328 ITPR3Q14573 2671 aa5.17□□□□□ -1.58
SCN11A-201ENST00000302328 TRANK1O15050 2925 aa5.16□□□□□ -1.58
SCN11A-201ENST00000302328 HRES1P13985 223 aa5.15□□□□□ -1.58
SCN11A-201ENST00000302328 SPINT4Q6UDR6 99 aa5.15□□□□□ -1.58
SCN11A-201ENST00000302328 FLNAP21333 2647 aaKnown RBP5.15□□□□□ -1.58
SCN11A-201ENST00000302328 A0A0D9SG42 100 aa5.15□□□□□ -1.59
SCN11A-201ENST00000302328 KRTAP26-1Q6PEX3 210 aa5.14□□□□□ -1.59
SCN11A-201ENST00000302328 FAM104AQ969W3 186 aa5.14□□□□□ -1.59
SCN11A-201ENST00000302328 CSAG1Q6PB30 78 aa5.13□□□□□ -1.59
SCN11A-201ENST00000302328 UQCR11O14957 56 aa5.12□□□□□ -1.59
SCN11A-201ENST00000302328 SPRR1AP35321 89 aa5.12□□□□□ -1.59
SCN11A-201ENST00000302328 C1orf195Q5TG92 126 aa5.12□□□□□ -1.59
SCN11A-201ENST00000302328 BRCA2P51587 3418 aa5.11□□□□□ -1.59
SCN11A-201ENST00000302328 SETD2Q9BYW2 2564 aaPredicted RBP5.11□□□□□ -1.59
SCN11A-201ENST00000302328 A8MUN3 132 aa5.11□□□□□ -1.59
SCN11A-201ENST00000302328 C4orf26Q17RF5 130 aa5.11□□□□□ -1.59
SCN11A-201ENST00000302328 CAMK2N1Q7Z7J9 78 aa5.1□□□□□ -1.59
SCN11A-201ENST00000302328 RANBP2P49792 3224 aaKnown RBP5.1□□□□□ -1.59
SCN11A-201ENST00000302328 CRIPTQ9P021 101 aa5.1□□□□□ -1.59
SCN11A-201ENST00000302328 USP24Q9UPU5 2620 aa5.1□□□□□ -1.59
SCN11A-201ENST00000302328 LINC00483Q53H64 154 aa5.09□□□□□ -1.59
SCN11A-201ENST00000302328 MIR22HGQ0VDD5 57 aa5.09□□□□□ -1.59
SCN11A-201ENST00000302328 BPTFQ12830 3046 aa5.09□□□□□ -1.6
SCN11A-201ENST00000302328 PANO1I0J062 215 aa5.08□□□□□ -1.6
SCN11A-201ENST00000302328 BAHCC1Q9P281 2608 aa5.08□□□□□ -1.6
SCN11A-201ENST00000302328 CFAP46Q8IYW2 2715 aa5.08□□□□□ -1.6
SCN11A-201ENST00000302328 SPRR1BP22528 89 aa5.08□□□□□ -1.6
SCN11A-201ENST00000302328 LAMA3Q16787 3333 aa5.08□□□□□ -1.6
SCN11A-201ENST00000302328 FLNBO75369 2602 aaKnown RBP5.07□□□□□ -1.6
SCN11A-201ENST00000302328 SPINK7P58062 85 aa5.06□□□□□ -1.6
SCN11A-201ENST00000302328 Q8NDZ9 215 aa5.06□□□□□ -1.6
SCN11A-201ENST00000302328 TNRC18O15417 2968 aaPredicted RBP5.05□□□□□ -1.6
SCN11A-201ENST00000302328 Q6ZRN7 208 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms