RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 IL17DQ8TAD2 202 aa8.98□□□□□ -0.97
CASC4-201ENST00000299957 CRYGAP11844 174 aa8.97□□□□□ -0.97
CASC4-201ENST00000299957 MP68P56378 58 aa8.97□□□□□ -0.97
CASC4-201ENST00000299957 Q6ZQT0 140 aa8.97□□□□□ -0.97
CASC4-201ENST00000299957 Q8NAQ8 132 aa8.97□□□□□ -0.97
CASC4-201ENST00000299957 KRTAP1-3Q8IUG1 177 aa8.97□□□□□ -0.97
CASC4-201ENST00000299957 ST20-AS1Q8NBB2 130 aa8.96□□□□□ -0.98
CASC4-201ENST00000299957 C7orf33Q8WU49 177 aa8.95□□□□□ -0.98
CASC4-201ENST00000299957 FAM168BA1KXE4 195 aa8.94□□□□□ -0.98
CASC4-201ENST00000299957 TMEM254Q8TBM7 123 aa8.94□□□□□ -0.98
CASC4-201ENST00000299957 VWFP04275 2813 aa8.94□□□□□ -0.98
CASC4-201ENST00000299957 A0A087WSZ3 146 aa8.94□□□□□ -0.98
CASC4-201ENST00000299957 H3BQ85 93 aa8.94□□□□□ -0.98
CASC4-201ENST00000299957 CYSTM1Q9H1C7 97 aa8.94□□□□□ -0.98
CASC4-201ENST00000299957 FBN1P35555 2871 aaKnown RBP8.93□□□□□ -0.98
CASC4-201ENST00000299957 Q6ZRP5 223 aa8.93□□□□□ -0.98
CASC4-201ENST00000299957 SPINK6Q6UWN8 80 aa8.92□□□□□ -0.98
CASC4-201ENST00000299957 Q8NDZ9 215 aa8.92□□□□□ -0.98
CASC4-201ENST00000299957 IGLV9-49A0A0B4J1Y8 123 aa8.92□□□□□ -0.98
CASC4-201ENST00000299957 SMIM29Q86T20 159 aa8.9□□□□□ -0.99
CASC4-201ENST00000299957 LINC00208Q96KT6 92 aa8.9□□□□□ -0.99
CASC4-201ENST00000299957 SPTSSBQ8NFR3 76 aa8.89□□□□□ -0.99
CASC4-201ENST00000299957 PSPHP1O15172 72 aa8.89□□□□□ -0.99
CASC4-201ENST00000299957 DHRS4-AS1Q9P1J3 65 aa8.89□□□□□ -0.99
CASC4-201ENST00000299957 LINC00167Q96N53 147 aa8.89□□□□□ -0.99
CASC4-201ENST00000299957 C22orf24Q9Y442 160 aa8.89□□□□□ -0.99
CASC4-201ENST00000299957 SERTAD4-AS1Q5TG53 156 aa8.88□□□□□ -0.99
CASC4-201ENST00000299957 NDUFB1O75438 58 aa8.88□□□□□ -0.99
CASC4-201ENST00000299957 TENM1Q9UKZ4 2725 aa8.87□□□□□ -0.99
CASC4-201ENST00000299957 IGKV4-1P06312 121 aa8.87□□□□□ -0.99
CASC4-201ENST00000299957 VPREB1P12018 145 aa8.87□□□□□ -0.99
CASC4-201ENST00000299957 KRTAP1-1Q07627 177 aa8.87□□□□□ -0.99
CASC4-201ENST00000299957 MRPL55Q7Z7F7 128 aaKnown RBP8.87□□□□□ -0.99
CASC4-201ENST00000299957 PRYO14603 147 aa8.86□□□□□ -0.99
CASC4-201ENST00000299957 IGLV6-57P01721 117 aa8.86□□□□□ -0.99
CASC4-201ENST00000299957 TRBV7-6A0A0J9YX20 115 aa8.86□□□□□ -0.99
CASC4-201ENST00000299957 ELOF1P60002 83 aaKnown RBP8.86□□□□□ -0.99
CASC4-201ENST00000299957 BSNQ9UPA5 3926 aa8.86□□□□□ -0.99
CASC4-201ENST00000299957 SERP1Q9Y6X1 66 aa8.85□□□□□ -0.99
CASC4-201ENST00000299957 SMIM26A0A096LP01 95 aa8.85□□□□□ -0.99
CASC4-201ENST00000299957 LINC00474Q9P2X8 69 aa8.85□□□□□ -0.99
CASC4-201ENST00000299957 CHTF8P0CG12 524 aa8.84□□□□□ -0.99
CASC4-201ENST00000299957 REG3GQ6UW15 175 aa8.84□□□□□ -0.99
CASC4-201ENST00000299957 C2orf48Q96LS8 159 aa8.83□□□□□ -1
CASC4-201ENST00000299957 CASC10Q5T4H9 136 aa8.83□□□□□ -1
CASC4-201ENST00000299957 RPL37AP61513 92 aaKnown RBP8.82□□□□□ -1
CASC4-201ENST00000299957 PCOTHQ58A44 107 aa8.82□□□□□ -1
CASC4-201ENST00000299957 B9D2Q9BPU9 175 aa8.82□□□□□ -1
CASC4-201ENST00000299957 ZFHX3Q15911 3703 aa8.81□□□□□ -1
CASC4-201ENST00000299957 NDUFC1O43677 76 aa8.81□□□□□ -1
CASC4-201ENST00000299957 CXCL6P80162 114 aa8.81□□□□□ -1
CASC4-201ENST00000299957 VPS13CQ709C8 3753 aa8.81□□□□□ -1
CASC4-201ENST00000299957 Q9BRP9 147 aa8.8□□□□□ -1
CASC4-201ENST00000299957 NBPF19A0A087WUL8 3843 aa8.8□□□□□ -1
CASC4-201ENST00000299957 C15orf56Q8N910 161 aa8.79□□□□□ -1
CASC4-201ENST00000299957 LOC110117498A0A087WWA1 95 aa8.79□□□□□ -1
CASC4-201ENST00000299957 KRTAP24-1Q3LI83 254 aa8.79□□□□□ -1
CASC4-201ENST00000299957 LINC01556Q5JQF7 62 aa8.79□□□□□ -1
CASC4-201ENST00000299957 KRTAP10-11P60412 298 aa8.78□□□□□ -1
CASC4-201ENST00000299957 PRR34Q9NV39 138 aa8.78□□□□□ -1
CASC4-201ENST00000299957 LINC00588Q9Y4M8 146 aa8.78□□□□□ -1
CASC4-201ENST00000299957 TENM3Q9P273 2699 aa8.78□□□□□ -1
CASC4-201ENST00000299957 LINC00612Q8N6U2 182 aa8.77□□□□□ -1.01
CASC4-201ENST00000299957 LINC00528Q8N1L1 170 aa8.76□□□□□ -1.01
CASC4-201ENST00000299957 PHF5AQ7RTV0 110 aaKnown RBP8.75□□□□□ -1.01
CASC4-201ENST00000299957 RPS28P62857 69 aaKnown RBP8.75□□□□□ -1.01
CASC4-201ENST00000299957 Q6ZRX8 168 aa8.75□□□□□ -1.01
CASC4-201ENST00000299957 ERC2-IT1O76042 136 aa8.74□□□□□ -1.01
CASC4-201ENST00000299957 Q8N377 158 aa8.74□□□□□ -1.01
CASC4-201ENST00000299957 LINC00476Q8WZB0 136 aa8.74□□□□□ -1.01
CASC4-201ENST00000299957 PKD1L1Q8TDX9 2849 aa8.74□□□□□ -1.01
CASC4-201ENST00000299957 K7EQZ3 153 aa8.74□□□□□ -1.01
CASC4-201ENST00000299957 RETNLBQ9BQ08 111 aa8.74□□□□□ -1.01
CASC4-201ENST00000299957 TENM4Q6N022 2769 aa8.74□□□□□ -1.01
CASC4-201ENST00000299957 H7BZZ5 65 aa8.73□□□□□ -1.01
CASC4-201ENST00000299957 OTOGQ6ZRI0 2925 aa8.73□□□□□ -1.01
CASC4-201ENST00000299957 LINC01600Q96MT4 127 aa8.73□□□□□ -1.01
CASC4-201ENST00000299957 IGHV6-1A0A0B4J1U7 121 aa8.72□□□□□ -1.01
CASC4-201ENST00000299957 CASC2Q6XLA1 102 aa8.72□□□□□ -1.01
CASC4-201ENST00000299957 CHKB-CPT1BH3BT56 60 aa8.72□□□□□ -1.01
CASC4-201ENST00000299957 HCG22E2RYF7 251 aa8.71□□□□□ -1.01
CASC4-201ENST00000299957 OBSCN-AS1Q96MR7 158 aa8.71□□□□□ -1.01
CASC4-201ENST00000299957 Q8NBF4 154 aa8.71□□□□□ -1.02
CASC4-201ENST00000299957 GVQW2A0A096LPI5 108 aaPredicted RBP8.7□□□□□ -1.02
CASC4-201ENST00000299957 TRBV7-4A0A0J9YYF1 115 aa8.7□□□□□ -1.02
CASC4-201ENST00000299957 LINC00336Q6ZUF6 198 aa8.69□□□□□ -1.02
CASC4-201ENST00000299957 H0Y9P7 68 aa8.68□□□□□ -1.02
CASC4-201ENST00000299957 C14orf177Q52M58 125 aa8.68□□□□□ -1.02
CASC4-201ENST00000299957 A6NED7 52 aa8.68□□□□□ -1.02
CASC4-201ENST00000299957 C1orf195Q5TG92 126 aa8.67□□□□□ -1.02
CASC4-201ENST00000299957 ATP5EP56381 51 aaPredicted RBP8.66□□□□□ -1.02
CASC4-201ENST00000299957 CIRBP-AS1Q8TBR5 109 aa8.66□□□□□ -1.02
CASC4-201ENST00000299957 A0A1W2PNM2 257 aa8.65□□□□□ -1.02
CASC4-201ENST00000299957 DNAH10OSP0CZ25 163 aa8.65□□□□□ -1.02
CASC4-201ENST00000299957 PRR15LQ9BU68 103 aa8.65□□□□□ -1.02
CASC4-201ENST00000299957 EPM2AB3EWF7 344 aa8.64□□□□□ -1.03
CASC4-201ENST00000299957 LY6G6CO95867 125 aa8.64□□□□□ -1.03
CASC4-201ENST00000299957 KCNQ1DNQ9H478 68 aa8.64□□□□□ -1.03
CASC4-201ENST00000299957 IGLV1-50A0A075B6I6 118 aa8.63□□□□□ -1.03
CASC4-201ENST00000299957 OXTP01178 125 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms