RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 C15orf56Q8N910 161 aa12.85□□□□□ -0.35
FAM20B-201ENST00000263733 PRR34Q9NV39 138 aa12.85□□□□□ -0.35
FAM20B-201ENST00000263733 DNAH10OSP0CZ25 163 aa12.84□□□□□ -0.35
FAM20B-201ENST00000263733 LAMA2P24043 3122 aaKnown RBP12.83□□□□□ -0.35
FAM20B-201ENST00000263733 C8orf87E5RJ46 101 aa12.82□□□□□ -0.36
FAM20B-201ENST00000263733 C19orf73Q9NVV2 129 aa12.82□□□□□ -0.36
FAM20B-201ENST00000263733 RTL8CO15255 209 aa12.8□□□□□ -0.36
FAM20B-201ENST00000263733 MRPL34Q9BQ48 92 aaKnown RBP12.8□□□□□ -0.36
FAM20B-201ENST00000263733 KRTAP24-1Q3LI83 254 aa12.79□□□□□ -0.36
FAM20B-201ENST00000263733 PRR15Q8IV56 129 aa12.78□□□□□ -0.36
FAM20B-201ENST00000263733 NBDYA0A0U1RRE5 68 aa12.78□□□□□ -0.36
FAM20B-201ENST00000263733 LOC101927531A0A1B0GV80 90 aa12.78□□□□□ -0.36
FAM20B-201ENST00000263733 CYP4F30PQ9H0H9 118 aa12.77□□□□□ -0.37
FAM20B-201ENST00000263733 RANBP2P49792 3224 aaKnown RBP12.77□□□□□ -0.37
FAM20B-201ENST00000263733 MKI67P46013 3256 aaKnown RBP12.76□□□□□ -0.37
FAM20B-201ENST00000263733 OBSCN-AS1Q96MR7 158 aa12.75□□□□□ -0.37
FAM20B-201ENST00000263733 LINC01600Q96MT4 127 aa12.74□□□□□ -0.37
FAM20B-201ENST00000263733 A0A1W2PNM2 257 aa12.72□□□□□ -0.37
FAM20B-201ENST00000263733 A0A096LNT2 108 aa12.71□□□□□ -0.37
FAM20B-201ENST00000263733 LINC00612Q8N6U2 182 aa12.71□□□□□ -0.37
FAM20B-201ENST00000263733 C8orf17Q9NRJ1 99 aa12.71□□□□□ -0.37
FAM20B-201ENST00000263733 FAM104AQ969W3 186 aa12.71□□□□□ -0.38
FAM20B-201ENST00000263733 Q96NJ1 140 aa12.71□□□□□ -0.38
FAM20B-201ENST00000263733 HTTP42858 3142 aa12.7□□□□□ -0.38
FAM20B-201ENST00000263733 MGAM2Q2M2H8 2515 aa12.69□□□□□ -0.38
FAM20B-201ENST00000263733 BRCA2P51587 3418 aa12.67□□□□□ -0.38
FAM20B-201ENST00000263733 LAMA3Q16787 3333 aa12.67□□□□□ -0.38
FAM20B-201ENST00000263733 KRTAP10-3P60369 221 aa12.67□□□□□ -0.38
FAM20B-201ENST00000263733 TYMSOSQ8TAI1 123 aa12.67□□□□□ -0.38
FAM20B-201ENST00000263733 FAM229AH3BQW9 127 aa12.66□□□□□ -0.38
FAM20B-201ENST00000263733 DSCR10P59022 87 aa12.66□□□□□ -0.38
FAM20B-201ENST00000263733 KRTAP10-11P60412 298 aa12.65□□□□□ -0.38
FAM20B-201ENST00000263733 CASC10Q5T4H9 136 aa12.64□□□□□ -0.39
FAM20B-201ENST00000263733 ANAPC11Q9NYG5 84 aa12.63□□□□□ -0.39
FAM20B-201ENST00000263733 CHD9Q3L8U1 2897 aa12.63□□□□□ -0.39
FAM20B-201ENST00000263733 UQCR11O14957 56 aa12.63□□□□□ -0.39
FAM20B-201ENST00000263733 HECTD1Q9ULT8 2610 aa12.63□□□□□ -0.39
FAM20B-201ENST00000263733 A0A1B0GVX0 72 aa12.61□□□□□ -0.39
FAM20B-201ENST00000263733 FLNBO75369 2602 aaKnown RBP12.6□□□□□ -0.39
FAM20B-201ENST00000263733 CYSTM1Q9H1C7 97 aa12.59□□□□□ -0.39
FAM20B-201ENST00000263733 CD164Q04900 197 aa12.58□□□□□ -0.4
FAM20B-201ENST00000263733 OCR1Q9BZK8 76 aa12.57□□□□□ -0.4
FAM20B-201ENST00000263733 TLX1NBP0CAT3 122 aa12.57□□□□□ -0.4
FAM20B-201ENST00000263733 MIR22HGQ0VDD5 57 aa12.57□□□□□ -0.4
FAM20B-201ENST00000263733 SPINT4Q6UDR6 99 aa12.57□□□□□ -0.4
FAM20B-201ENST00000263733 SSBP3-AS1Q7Z2R9 100 aa12.57□□□□□ -0.4
FAM20B-201ENST00000263733 CENPEQ02224 2701 aa12.56□□□□□ -0.4
FAM20B-201ENST00000263733 PLA2G2DQ9UNK4 145 aa12.55□□□□□ -0.4
FAM20B-201ENST00000263733 KTN1-AS1Q86SY8 53 aa12.55□□□□□ -0.4
FAM20B-201ENST00000263733 CR1P17927 2039 aa12.55□□□□□ -0.4
FAM20B-201ENST00000263733 IGLV5-48A0A075B6I7 105 aa12.53□□□□□ -0.4
FAM20B-201ENST00000263733 FLNAP21333 2647 aaKnown RBP12.52□□□□□ -0.4
FAM20B-201ENST00000263733 UNC80Q8N2C7 3258 aa12.52□□□□□ -0.41
FAM20B-201ENST00000263733 PLA2G1BP04054 148 aaKnown RBP12.51□□□□□ -0.41
FAM20B-201ENST00000263733 ATRQ13535 2644 aa12.5□□□□□ -0.41
FAM20B-201ENST00000263733 AKAP13Q12802 2813 aa12.5□□□□□ -0.41
FAM20B-201ENST00000263733 ZNF861PO60384 105 aa12.48□□□□□ -0.41
FAM20B-201ENST00000263733 K7EIL1 84 aa12.48□□□□□ -0.41
FAM20B-201ENST00000263733 MGAQ8IWI9 3026 aa12.47□□□□□ -0.41
FAM20B-201ENST00000263733 SPANXA2-OT1Q8N9U9 137 aa12.47□□□□□ -0.41
FAM20B-201ENST00000263733 Q5XG85 94 aa12.46□□□□□ -0.41
FAM20B-201ENST00000263733 C9orf163Q8N9P6 203 aa12.46□□□□□ -0.42
FAM20B-201ENST00000263733 TRIOO75962 3097 aa12.44□□□□□ -0.42
FAM20B-201ENST00000263733 FAM229BQ4G0N7 80 aa12.44□□□□□ -0.42
FAM20B-201ENST00000263733 XIRP2A4UGR9 3374 aa12.44□□□□□ -0.42
FAM20B-201ENST00000263733 WDFY4Q6ZS81 3184 aa12.44□□□□□ -0.42
FAM20B-201ENST00000263733 Q8NDZ9 215 aa12.44□□□□□ -0.42
FAM20B-201ENST00000263733 ITPR3Q14573 2671 aa12.43□□□□□ -0.42
FAM20B-201ENST00000263733 WIPF1O43516 503 aa12.42□□□□□ -0.42
FAM20B-201ENST00000263733 FREM2Q5SZK8 3169 aa12.42□□□□□ -0.42
FAM20B-201ENST00000263733 PRR26Q8N8Z3 221 aa12.42□□□□□ -0.42
FAM20B-201ENST00000263733 LCA10Q71F78 164 aa12.41□□□□□ -0.42
FAM20B-201ENST00000263733 Q1T7F1 81 aa12.41□□□□□ -0.42
FAM20B-201ENST00000263733 CDC42SE1Q9NRR8 79 aa12.4□□□□□ -0.42
FAM20B-201ENST00000263733 SPRR4Q96PI1 79 aa12.39□□□□□ -0.43
FAM20B-201ENST00000263733 PSORS1C2Q9UIG4 136 aa12.39□□□□□ -0.43
FAM20B-201ENST00000263733 PRUNE2Q8WUY3 3088 aa12.39□□□□□ -0.43
FAM20B-201ENST00000263733 C9orf92A6NGG3 77 aa12.38□□□□□ -0.43
FAM20B-201ENST00000263733 CHD6Q8TD26 2715 aa12.38□□□□□ -0.43
FAM20B-201ENST00000263733 FP248Q71RG6 208 aaPredicted RBP12.37□□□□□ -0.43
FAM20B-201ENST00000263733 KRTAP1-3Q8IUG1 177 aa12.37□□□□□ -0.43
FAM20B-201ENST00000263733 A0A087WTM6 91 aa12.37□□□□□ -0.43
FAM20B-201ENST00000263733 APLNQ9ULZ1 77 aa12.35□□□□□ -0.43
FAM20B-201ENST00000263733 MAST4O15021 2626 aa12.35□□□□□ -0.43
FAM20B-201ENST00000263733 IGLV5-37A0A075B6J1 123 aa12.33□□□□□ -0.44
FAM20B-201ENST00000263733 Q8N1X5 172 aa12.33□□□□□ -0.44
FAM20B-201ENST00000263733 CNBPP62633 177 aaKnown RBP12.31□□□□□ -0.44
FAM20B-201ENST00000263733 TRANK1O15050 2925 aa12.29□□□□□ -0.44
FAM20B-201ENST00000263733 VPS13AQ96RL7 3174 aa12.29□□□□□ -0.44
FAM20B-201ENST00000263733 IGLV7-43P04211 117 aa12.29□□□□□ -0.44
FAM20B-201ENST00000263733 KRTAP1-1Q07627 177 aa12.28□□□□□ -0.44
FAM20B-201ENST00000263733 LINC00304Q8N9R0 145 aa12.27□□□□□ -0.44
FAM20B-201ENST00000263733 OXTP01178 125 aa12.27□□□□□ -0.45
FAM20B-201ENST00000263733 MAP1AP78559 2803 aaPredicted RBP12.26□□□□□ -0.45
FAM20B-201ENST00000263733 CELSR3Q9NYQ7 3312 aa12.25□□□□□ -0.45
FAM20B-201ENST00000263733 CRIPTQ9P021 101 aa12.23□□□□□ -0.45
FAM20B-201ENST00000263733 IGLV7-46A0A075B6I9 117 aa12.23□□□□□ -0.45
FAM20B-201ENST00000263733 CFAP46Q8IYW2 2715 aa12.22□□□□□ -0.45
FAM20B-201ENST00000263733 FRYQ5TBA9 3013 aa12.21□□□□□ -0.45
FAM20B-201ENST00000263733 SMR3BP02814 79 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 244.6 ms