RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 CNBPP62633 177 aaKnown RBP4.33□□□□□ -1.72
PDGFRA-201ENST00000257290 Q8N377 158 aa4.33□□□□□ -1.72
PDGFRA-201ENST00000257290 LCE6AA0A183 80 aa4.33□□□□□ -1.72
PDGFRA-201ENST00000257290 IGLV5-37A0A075B6J1 123 aa4.33□□□□□ -1.72
PDGFRA-201ENST00000257290 ZNF462Q96JM2 2506 aa4.33□□□□□ -1.72
PDGFRA-201ENST00000257290 GVQW2A0A096LPI5 108 aaPredicted RBP4.33□□□□□ -1.72
PDGFRA-201ENST00000257290 LINC00483Q53H64 154 aa4.31□□□□□ -1.72
PDGFRA-201ENST00000257290 IGFL1Q6UW32 110 aa4.31□□□□□ -1.72
PDGFRA-201ENST00000257290 HTTP42858 3142 aa4.31□□□□□ -1.72
PDGFRA-201ENST00000257290 SPRR4Q96PI1 79 aa4.3□□□□□ -1.72
PDGFRA-201ENST00000257290 DNAH12Q6ZR08 3092 aa4.3□□□□□ -1.72
PDGFRA-201ENST00000257290 IGF2RP11717 2491 aa4.3□□□□□ -1.72
PDGFRA-201ENST00000257290 RTL8CO15255 209 aa4.3□□□□□ -1.72
PDGFRA-201ENST00000257290 APLNQ9ULZ1 77 aa4.3□□□□□ -1.72
PDGFRA-201ENST00000257290 NBASA2RRP1 2371 aa4.29□□□□□ -1.72
PDGFRA-201ENST00000257290 CHD9Q3L8U1 2897 aa4.29□□□□□ -1.72
PDGFRA-201ENST00000257290 A0A1B0GU33 70 aa4.29□□□□□ -1.72
PDGFRA-201ENST00000257290 LINC00612Q8N6U2 182 aa4.29□□□□□ -1.72
PDGFRA-201ENST00000257290 NCOR2Q9Y618 2525 aa4.28□□□□□ -1.72
PDGFRA-201ENST00000257290 CASC10Q5T4H9 136 aa4.28□□□□□ -1.72
PDGFRA-201ENST00000257290 ZNF575Q86XF7 245 aa4.28□□□□□ -1.72
PDGFRA-201ENST00000257290 KRTAP1-3Q8IUG1 177 aa4.28□□□□□ -1.72
PDGFRA-201ENST00000257290 PLA2G2DQ9UNK4 145 aa4.27□□□□□ -1.73
PDGFRA-201ENST00000257290 A0A1B0GVX0 72 aa4.27□□□□□ -1.73
PDGFRA-201ENST00000257290 CSNK1G2-AS1Q8NCQ2 148 aa4.27□□□□□ -1.73
PDGFRA-201ENST00000257290 CIRBP-AS1Q8TBR5 109 aa4.27□□□□□ -1.73
PDGFRA-201ENST00000257290 FAM208BQ5VWN6 2430 aa4.27□□□□□ -1.73
PDGFRA-201ENST00000257290 BPTFQ12830 3046 aa4.27□□□□□ -1.73
PDGFRA-201ENST00000257290 HIVEP2P31629 2446 aa4.26□□□□□ -1.73
PDGFRA-201ENST00000257290 KRTAP24-1Q3LI83 254 aa4.26□□□□□ -1.73
PDGFRA-201ENST00000257290 BDP1A6H8Y1 2624 aa4.26□□□□□ -1.73
PDGFRA-201ENST00000257290 A8MUU9 505 aa4.26□□□□□ -1.73
PDGFRA-201ENST00000257290 LY6G6CO95867 125 aa4.26□□□□□ -1.73
PDGFRA-201ENST00000257290 CHD7Q9P2D1 2997 aa4.25□□□□□ -1.73
PDGFRA-201ENST00000257290 H3BNG1 76 aa4.24□□□□□ -1.73
PDGFRA-201ENST00000257290 PIEZO1Q92508 2521 aa4.23□□□□□ -1.73
PDGFRA-201ENST00000257290 ZNF861PO60384 105 aa4.23□□□□□ -1.73
PDGFRA-201ENST00000257290 KRTAP1-1Q07627 177 aa4.23□□□□□ -1.73
PDGFRA-201ENST00000257290 TRANK1O15050 2925 aa4.22□□□□□ -1.73
PDGFRA-201ENST00000257290 C15orf56Q8N910 161 aa4.22□□□□□ -1.73
PDGFRA-201ENST00000257290 PIEZO2Q9H5I5 2752 aa4.22□□□□□ -1.73
PDGFRA-201ENST00000257290 ACACBO00763 2458 aa4.21□□□□□ -1.74
PDGFRA-201ENST00000257290 TLN1Q9Y490 2541 aaKnown RBP4.21□□□□□ -1.74
PDGFRA-201ENST00000257290 NAV2Q8IVL1 2488 aa4.21□□□□□ -1.74
PDGFRA-201ENST00000257290 IGLV5-52A0A0A0MRZ9 124 aa4.2□□□□□ -1.74
PDGFRA-201ENST00000257290 KRTAP10-3P60369 221 aa4.2□□□□□ -1.74
PDGFRA-201ENST00000257290 MMP24-AS1A0A0U1RRL7 71 aa4.2□□□□□ -1.74
PDGFRA-201ENST00000257290 Q8NDZ9 215 aa4.19□□□□□ -1.74
PDGFRA-201ENST00000257290 LINC01556Q5JQF7 62 aa4.19□□□□□ -1.74
PDGFRA-201ENST00000257290 A0A0D9SG42 100 aa4.17□□□□□ -1.74
PDGFRA-201ENST00000257290 A0A0G2JQZ4 141 aa4.16□□□□□ -1.74
PDGFRA-201ENST00000257290 A0A1W2PNN7 141 aa4.16□□□□□ -1.74
PDGFRA-201ENST00000257290 CENPFP49454 3210 aa4.16□□□□□ -1.74
PDGFRA-201ENST00000257290 CEP295Q9C0D2 2601 aa4.16□□□□□ -1.74
PDGFRA-201ENST00000257290 PCNTO95613 3336 aa4.15□□□□□ -1.74
PDGFRA-201ENST00000257290 KRTAP29-1A8MX34 341 aaPredicted RBP4.15□□□□□ -1.74
PDGFRA-201ENST00000257290 CSPG4Q6UVK1 2322 aa4.15□□□□□ -1.74
PDGFRA-201ENST00000257290 ANKRD11Q6UB99 2663 aaPredicted RBP4.15□□□□□ -1.74
PDGFRA-201ENST00000257290 CR1P17927 2039 aa4.15□□□□□ -1.75
PDGFRA-201ENST00000257290 KRTAP10-11P60412 298 aa4.15□□□□□ -1.75
PDGFRA-201ENST00000257290 Q5W150 140 aa4.15□□□□□ -1.75
PDGFRA-201ENST00000257290 GIG44P09565 113 aaPredicted RBP4.15□□□□□ -1.75
PDGFRA-201ENST00000257290 HIVEP3Q5T1R4 2406 aa4.14□□□□□ -1.75
PDGFRA-201ENST00000257290 RPL37P61927 97 aaKnown RBP4.14□□□□□ -1.75
PDGFRA-201ENST00000257290 CACNA1AO00555 2505 aa4.14□□□□□ -1.75
PDGFRA-201ENST00000257290 SPG11Q96JI7 2443 aa4.14□□□□□ -1.75
PDGFRA-201ENST00000257290 CEP350Q5VT06 3117 aa4.14□□□□□ -1.75
PDGFRA-201ENST00000257290 DOPEY1Q5JWR5 2465 aa4.13□□□□□ -1.75
PDGFRA-201ENST00000257290 PLAC8Q9NZF1 115 aa4.13□□□□□ -1.75
PDGFRA-201ENST00000257290 PSORS1C2Q9UIG4 136 aa4.13□□□□□ -1.75
PDGFRA-201ENST00000257290 WDR87Q6ZQQ6 2873 aa4.13□□□□□ -1.75
PDGFRA-201ENST00000257290 LINC00304Q8N9R0 145 aa4.13□□□□□ -1.75
PDGFRA-201ENST00000257290 KRTAP11-1Q8IUC1 163 aa4.12□□□□□ -1.75
PDGFRA-201ENST00000257290 PKD1L2Q7Z442 2459 aa4.11□□□□□ -1.75
PDGFRA-201ENST00000257290 FAM168BA1KXE4 195 aa4.11□□□□□ -1.75
PDGFRA-201ENST00000257290 H1FX-AS1Q4G0G2 97 aa4.11□□□□□ -1.75
PDGFRA-201ENST00000257290 K7EIL1 84 aa4.1□□□□□ -1.75
PDGFRA-201ENST00000257290 PANO1I0J062 215 aa4.09□□□□□ -1.75
PDGFRA-201ENST00000257290 Q8N1X5 172 aa4.09□□□□□ -1.75
PDGFRA-201ENST00000257290 LINC00472Q9H8W2 130 aa4.09□□□□□ -1.75
PDGFRA-201ENST00000257290 SONP18583 2426 aaKnown RBP4.08□□□□□ -1.76
PDGFRA-201ENST00000257290 NBDYA0A0U1RRE5 68 aa4.08□□□□□ -1.76
PDGFRA-201ENST00000257290 C5orf42Q9H799 3197 aa4.08□□□□□ -1.76
PDGFRA-201ENST00000257290 PTPN13Q12923 2485 aa4.07□□□□□ -1.76
PDGFRA-201ENST00000257290 PRR34Q9NV39 138 aa4.07□□□□□ -1.76
PDGFRA-201ENST00000257290 Q96NJ1 140 aa4.06□□□□□ -1.76
PDGFRA-201ENST00000257290 KRTAP4-16G5E9R7 235 aaPredicted RBP4.06□□□□□ -1.76
PDGFRA-201ENST00000257290 SPTBN4Q9H254 2564 aa4.05□□□□□ -1.76
PDGFRA-201ENST00000257290 CHD8Q9HCK8 2581 aa4.04□□□□□ -1.76
PDGFRA-201ENST00000257290 WWC2-AS2Q96NR7 200 aa4.04□□□□□ -1.76
PDGFRA-201ENST00000257290 KRTAP26-1Q6PEX3 210 aa4.04□□□□□ -1.76
PDGFRA-201ENST00000257290 CCDC168Q8NDH2 2452 aa4.03□□□□□ -1.76
PDGFRA-201ENST00000257290 ANKRD17O75179 2603 aaKnown RBP4.02□□□□□ -1.77
PDGFRA-201ENST00000257290 COX6B2Q6YFQ2 88 aa4.02□□□□□ -1.77
PDGFRA-201ENST00000257290 PLAC4Q8WY50 150 aa4.02□□□□□ -1.77
PDGFRA-201ENST00000257290 BRCA2P51587 3418 aa4.02□□□□□ -1.77
PDGFRA-201ENST00000257290 MYO18BQ8IUG5 2567 aa4.01□□□□□ -1.77
PDGFRA-201ENST00000257290 SPACA4Q8TDM5 124 aa4.01□□□□□ -1.77
PDGFRA-201ENST00000257290 NOTCH2Q04721 2471 aa4.01□□□□□ -1.77
PDGFRA-201ENST00000257290 P0C880 135 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms