RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 MPLKIPQ8TAP9 179 aa9.82□□□□□ -0.84
UBE4B-201ENST00000253251 LINC00336Q6ZUF6 198 aa9.81□□□□□ -0.84
UBE4B-201ENST00000253251 PLA2G1BP04054 148 aaKnown RBP9.8□□□□□ -0.84
UBE4B-201ENST00000253251 IGLV5-37A0A075B6J1 123 aa9.8□□□□□ -0.84
UBE4B-201ENST00000253251 TYMSOSQ8TAI1 123 aa9.79□□□□□ -0.84
UBE4B-201ENST00000253251 A0A0U1RQV1 116 aa9.79□□□□□ -0.84
UBE4B-201ENST00000253251 RPL37AP61513 92 aaKnown RBP9.79□□□□□ -0.84
UBE4B-201ENST00000253251 H3BPC8 53 aa9.79□□□□□ -0.84
UBE4B-201ENST00000253251 PRR4Q16378 134 aa9.78□□□□□ -0.84
UBE4B-201ENST00000253251 MAST4O15021 2626 aa9.78□□□□□ -0.84
UBE4B-201ENST00000253251 IGSF10Q6WRI0 2623 aa9.77□□□□□ -0.84
UBE4B-201ENST00000253251 ZNF861PO60384 105 aa9.77□□□□□ -0.85
UBE4B-201ENST00000253251 SSBP3-AS1Q7Z2R9 100 aa9.76□□□□□ -0.85
UBE4B-201ENST00000253251 SPACA4Q8TDM5 124 aa9.76□□□□□ -0.85
UBE4B-201ENST00000253251 SMIM29Q86T20 159 aa9.76□□□□□ -0.85
UBE4B-201ENST00000253251 K7ERS5 55 aa9.75□□□□□ -0.85
UBE4B-201ENST00000253251 C8orf87E5RJ46 101 aa9.74□□□□□ -0.85
UBE4B-201ENST00000253251 C1orf64Q8NEQ6 169 aa9.74□□□□□ -0.85
UBE4B-201ENST00000253251 UNC79Q9P2D8 2635 aa9.73□□□□□ -0.85
UBE4B-201ENST00000253251 FAM104AQ969W3 186 aa9.72□□□□□ -0.85
UBE4B-201ENST00000253251 Q8N377 158 aa9.71□□□□□ -0.86
UBE4B-201ENST00000253251 A8MWP4 228 aa9.7□□□□□ -0.86
UBE4B-201ENST00000253251 CASC10Q5T4H9 136 aa9.7□□□□□ -0.86
UBE4B-201ENST00000253251 PCOTHQ58A44 107 aa9.7□□□□□ -0.86
UBE4B-201ENST00000253251 SPAG11AQ6PDA7 123 aa9.69□□□□□ -0.86
UBE4B-201ENST00000253251 BRCA2P51587 3418 aa9.69□□□□□ -0.86
UBE4B-201ENST00000253251 LINC00313P59037 77 aa9.69□□□□□ -0.86
UBE4B-201ENST00000253251 IGFL1Q6UW32 110 aa9.68□□□□□ -0.86
UBE4B-201ENST00000253251 A0A1W2PNN7 141 aa9.67□□□□□ -0.86
UBE4B-201ENST00000253251 A6NED7 52 aa9.67□□□□□ -0.86
UBE4B-201ENST00000253251 PRUNE2Q8WUY3 3088 aa9.66□□□□□ -0.86
UBE4B-201ENST00000253251 DSPP15924 2871 aaKnown RBP9.66□□□□□ -0.86
UBE4B-201ENST00000253251 LINC01600Q96MT4 127 aa9.66□□□□□ -0.86
UBE4B-201ENST00000253251 IGLV7-43P04211 117 aa9.65□□□□□ -0.86
UBE4B-201ENST00000253251 TRAV22A0A0B4J277 110 aa9.64□□□□□ -0.87
UBE4B-201ENST00000253251 RETNLBQ9BQ08 111 aa9.63□□□□□ -0.87
UBE4B-201ENST00000253251 ERC2-IT1O76042 136 aa9.63□□□□□ -0.87
UBE4B-201ENST00000253251 RPS28P62857 69 aaKnown RBP9.62□□□□□ -0.87
UBE4B-201ENST00000253251 PSORS1C2Q9UIG4 136 aa9.62□□□□□ -0.87
UBE4B-201ENST00000253251 SPRR4Q96PI1 79 aa9.61□□□□□ -0.87
UBE4B-201ENST00000253251 IGKV2D-30A0A075B6S6 120 aa9.61□□□□□ -0.87
UBE4B-201ENST00000253251 IGKV2-30P06310 120 aa9.61□□□□□ -0.87
UBE4B-201ENST00000253251 PRO0628Q9UI54 55 aa9.6□□□□□ -0.87
UBE4B-201ENST00000253251 PMAIP1Q13794 54 aa9.6□□□□□ -0.87
UBE4B-201ENST00000253251 WDFY4Q6ZS81 3184 aa9.59□□□□□ -0.87
UBE4B-201ENST00000253251 MRPL34Q9BQ48 92 aaKnown RBP9.59□□□□□ -0.87
UBE4B-201ENST00000253251 LOC101927531A0A1B0GV80 90 aa9.58□□□□□ -0.88
UBE4B-201ENST00000253251 IGLV5-48A0A075B6I7 105 aa9.58□□□□□ -0.88
UBE4B-201ENST00000253251 PRR15Q8IV56 129 aa9.58□□□□□ -0.88
UBE4B-201ENST00000253251 LINC00304Q8N9R0 145 aa9.57□□□□□ -0.88
UBE4B-201ENST00000253251 K7EQZ3 153 aa9.57□□□□□ -0.88
UBE4B-201ENST00000253251 TRIOO75962 3097 aa9.56□□□□□ -0.88
UBE4B-201ENST00000253251 ACYP2P14621 99 aa9.56□□□□□ -0.88
UBE4B-201ENST00000253251 OBSCN-AS1Q96MR7 158 aa9.56□□□□□ -0.88
UBE4B-201ENST00000253251 C8orf17Q9NRJ1 99 aa9.53□□□□□ -0.88
UBE4B-201ENST00000253251 A0A1B0GVX0 72 aa9.52□□□□□ -0.88
UBE4B-201ENST00000253251 TNP2Q05952 138 aa9.52□□□□□ -0.88
UBE4B-201ENST00000253251 Q96NJ1 140 aa9.51□□□□□ -0.89
UBE4B-201ENST00000253251 C7orf65Q6ZTY9 151 aa9.51□□□□□ -0.89
UBE4B-201ENST00000253251 UNC80Q8N2C7 3258 aa9.51□□□□□ -0.89
UBE4B-201ENST00000253251 LAMA2P24043 3122 aaKnown RBP9.5□□□□□ -0.89
UBE4B-201ENST00000253251 A0A1W2PNM2 257 aa9.5□□□□□ -0.89
UBE4B-201ENST00000253251 CD164Q04900 197 aa9.49□□□□□ -0.89
UBE4B-201ENST00000253251 TEP1Q99973 2627 aaKnown RBP9.49□□□□□ -0.89
UBE4B-201ENST00000253251 A0A0C4DFX4 3053 aa9.48□□□□□ -0.89
UBE4B-201ENST00000253251 ATP11AUNQ6ZP68 121 aa9.48□□□□□ -0.89
UBE4B-201ENST00000253251 CFAP54Q96N23 3096 aa9.48□□□□□ -0.89
UBE4B-201ENST00000253251 COL6A5A8TX70 2615 aa9.47□□□□□ -0.89
UBE4B-201ENST00000253251 CHD6Q8TD26 2715 aa9.47□□□□□ -0.89
UBE4B-201ENST00000253251 SPRR1AP35321 89 aa9.47□□□□□ -0.89
UBE4B-201ENST00000253251 PLAC8Q9NZF1 115 aa9.47□□□□□ -0.89
UBE4B-201ENST00000253251 SPINK1P00995 79 aa9.46□□□□□ -0.89
UBE4B-201ENST00000253251 KRTAP26-1Q6PEX3 210 aa9.45□□□□□ -0.9
UBE4B-201ENST00000253251 STAB1Q9NY15 2570 aa9.44□□□□□ -0.9
UBE4B-201ENST00000253251 TEX15Q9BXT5 2789 aa9.44□□□□□ -0.9
UBE4B-201ENST00000253251 J3QL48 77 aa9.44□□□□□ -0.9
UBE4B-201ENST00000253251 CDH23Q9H251 3354 aa9.44□□□□□ -0.9
UBE4B-201ENST00000253251 BAHCC1Q9P281 2608 aa9.44□□□□□ -0.9
UBE4B-201ENST00000253251 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.43□□□□□ -0.9
UBE4B-201ENST00000253251 FAM229BQ4G0N7 80 aa9.43□□□□□ -0.9
UBE4B-201ENST00000253251 TNRC18O15417 2968 aaPredicted RBP9.43□□□□□ -0.9
UBE4B-201ENST00000253251 SMR3BP02814 79 aaPredicted RBP9.42□□□□□ -0.9
UBE4B-201ENST00000253251 KLKP1Q107X0 134 aa9.41□□□□□ -0.9
UBE4B-201ENST00000253251 DSCR10P59022 87 aa9.39□□□□□ -0.91
UBE4B-201ENST00000253251 ANAPC11Q9NYG5 84 aa9.39□□□□□ -0.91
UBE4B-201ENST00000253251 SETXQ7Z333 2677 aaKnown RBP9.38□□□□□ -0.91
UBE4B-201ENST00000253251 VPS13AQ96RL7 3174 aa9.38□□□□□ -0.91
UBE4B-201ENST00000253251 FLNCQ14315 2725 aa9.37□□□□□ -0.91
UBE4B-201ENST00000253251 PSPHP1O15172 72 aa9.37□□□□□ -0.91
UBE4B-201ENST00000253251 SPRR1BP22528 89 aa9.36□□□□□ -0.91
UBE4B-201ENST00000253251 A0A0G2JQZ4 141 aa9.36□□□□□ -0.91
UBE4B-201ENST00000253251 A0A1B0GU69 56 aa9.36□□□□□ -0.91
UBE4B-201ENST00000253251 KRTAP1-5Q9BYS1 174 aa9.35□□□□□ -0.91
UBE4B-201ENST00000253251 Q8NDZ9 215 aa9.33□□□□□ -0.92
UBE4B-201ENST00000253251 SZT2Q5T011 3432 aa9.33□□□□□ -0.92
UBE4B-201ENST00000253251 IGLV8-61A0A075B6I0 122 aa9.31□□□□□ -0.92
UBE4B-201ENST00000253251 XIRP2A4UGR9 3374 aa9.31□□□□□ -0.92
UBE4B-201ENST00000253251 LCE6AA0A183 80 aa9.28□□□□□ -0.92
UBE4B-201ENST00000253251 NOTCH1P46531 2555 aa9.28□□□□□ -0.92
UBE4B-201ENST00000253251 GCN1Q92616 2671 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms