RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 ANKRD17O75179 2603 aaKnown RBP13.01□□□□□ -0.33
SOX4-201ENST00000244745 WIPF1O43516 503 aa13□□□□□ -0.33
SOX4-201ENST00000244745 USP9YO00507 2555 aaPredicted RBP12.99□□□□□ -0.33
SOX4-201ENST00000244745 PRR15Q8IV56 129 aa12.98□□□□□ -0.33
SOX4-201ENST00000244745 SETD2Q9BYW2 2564 aaPredicted RBP12.98□□□□□ -0.33
SOX4-201ENST00000244745 CHD7Q9P2D1 2997 aa12.97□□□□□ -0.33
SOX4-201ENST00000244745 JMJD1CQ15652 2540 aa12.95□□□□□ -0.34
SOX4-201ENST00000244745 FAM104AQ969W3 186 aa12.94□□□□□ -0.34
SOX4-201ENST00000244745 ZNF462Q96JM2 2506 aa12.92□□□□□ -0.34
SOX4-201ENST00000244745 TYMSOSQ8TAI1 123 aa12.92□□□□□ -0.34
SOX4-201ENST00000244745 C8orf17Q9NRJ1 99 aa12.92□□□□□ -0.34
SOX4-201ENST00000244745 Q96NJ1 140 aa12.91□□□□□ -0.34
SOX4-201ENST00000244745 UQCR11O14957 56 aa12.91□□□□□ -0.34
SOX4-201ENST00000244745 PLA2G2DQ9UNK4 145 aa12.91□□□□□ -0.34
SOX4-201ENST00000244745 SPINT4Q6UDR6 99 aa12.91□□□□□ -0.34
SOX4-201ENST00000244745 TLX1NBP0CAT3 122 aa12.9□□□□□ -0.34
SOX4-201ENST00000244745 Q5XG85 94 aa12.88□□□□□ -0.35
SOX4-201ENST00000244745 MIR22HGQ0VDD5 57 aa12.88□□□□□ -0.35
SOX4-201ENST00000244745 POLQO75417 2590 aa12.88□□□□□ -0.35
SOX4-201ENST00000244745 CHD8Q9HCK8 2581 aa12.88□□□□□ -0.35
SOX4-201ENST00000244745 CASC10Q5T4H9 136 aa12.87□□□□□ -0.35
SOX4-201ENST00000244745 A0A1W2PNM2 257 aa12.87□□□□□ -0.35
SOX4-201ENST00000244745 LCA10Q71F78 164 aa12.86□□□□□ -0.35
SOX4-201ENST00000244745 DSCR10P59022 87 aa12.86□□□□□ -0.35
SOX4-201ENST00000244745 FAM229AH3BQW9 127 aa12.86□□□□□ -0.35
SOX4-201ENST00000244745 PRRC2CQ9Y520 2896 aaKnown RBP12.85□□□□□ -0.35
SOX4-201ENST00000244745 CYSTM1Q9H1C7 97 aa12.85□□□□□ -0.35
SOX4-201ENST00000244745 KRTAP1-3Q8IUG1 177 aa12.85□□□□□ -0.35
SOX4-201ENST00000244745 K7EIL1 84 aa12.84□□□□□ -0.35
SOX4-201ENST00000244745 OCR1Q9BZK8 76 aa12.83□□□□□ -0.36
SOX4-201ENST00000244745 Q1T7F1 81 aa12.83□□□□□ -0.36
SOX4-201ENST00000244745 SPANXA2-OT1Q8N9U9 137 aa12.82□□□□□ -0.36
SOX4-201ENST00000244745 A0A1B0GVX0 72 aa12.82□□□□□ -0.36
SOX4-201ENST00000244745 SSBP3-AS1Q7Z2R9 100 aa12.81□□□□□ -0.36
SOX4-201ENST00000244745 PKD1L2Q7Z442 2459 aa12.81□□□□□ -0.36
SOX4-201ENST00000244745 SPTBN4Q9H254 2564 aa12.81□□□□□ -0.36
SOX4-201ENST00000244745 HTTP42858 3142 aa12.8□□□□□ -0.36
SOX4-201ENST00000244745 ZFYVE26Q68DK2 2539 aa12.8□□□□□ -0.36
SOX4-201ENST00000244745 CDC42SE1Q9NRR8 79 aa12.8□□□□□ -0.36
SOX4-201ENST00000244745 J3QL48 77 aa12.78□□□□□ -0.36
SOX4-201ENST00000244745 ANAPC11Q9NYG5 84 aa12.78□□□□□ -0.36
SOX4-201ENST00000244745 FAM229BQ4G0N7 80 aa12.77□□□□□ -0.37
SOX4-201ENST00000244745 ZNF861PO60384 105 aa12.73□□□□□ -0.37
SOX4-201ENST00000244745 MTORP42345 2549 aa12.73□□□□□ -0.37
SOX4-201ENST00000244745 KRTAP1-1Q07627 177 aa12.72□□□□□ -0.37
SOX4-201ENST00000244745 IGLV5-48A0A075B6I7 105 aa12.72□□□□□ -0.37
SOX4-201ENST00000244745 CHD9Q3L8U1 2897 aa12.71□□□□□ -0.38
SOX4-201ENST00000244745 C9orf163Q8N9P6 203 aa12.7□□□□□ -0.38
SOX4-201ENST00000244745 FP248Q71RG6 208 aaPredicted RBP12.68□□□□□ -0.38
SOX4-201ENST00000244745 MKI67P46013 3256 aaKnown RBP12.68□□□□□ -0.38
SOX4-201ENST00000244745 A0A087WTM6 91 aa12.67□□□□□ -0.38
SOX4-201ENST00000244745 IGLV5-37A0A075B6J1 123 aa12.67□□□□□ -0.38
SOX4-201ENST00000244745 A0A0C4DFX4 3053 aa12.67□□□□□ -0.38
SOX4-201ENST00000244745 COX6B2Q6YFQ2 88 aa12.67□□□□□ -0.38
SOX4-201ENST00000244745 ACANP16112 2415 aa12.66□□□□□ -0.38
SOX4-201ENST00000244745 CNBPP62633 177 aaKnown RBP12.65□□□□□ -0.39
SOX4-201ENST00000244745 SPRR4Q96PI1 79 aa12.65□□□□□ -0.39
SOX4-201ENST00000244745 PSORS1C2Q9UIG4 136 aa12.62□□□□□ -0.39
SOX4-201ENST00000244745 Q8NDZ9 215 aa12.61□□□□□ -0.39
SOX4-201ENST00000244745 RBM12B-AS1Q9P1G2 102 aa12.6□□□□□ -0.39
SOX4-201ENST00000244745 APLNQ9ULZ1 77 aa12.59□□□□□ -0.39
SOX4-201ENST00000244745 C9orf92A6NGG3 77 aa12.59□□□□□ -0.39
SOX4-201ENST00000244745 OXTP01178 125 aa12.59□□□□□ -0.39
SOX4-201ENST00000244745 IGLV7-43P04211 117 aa12.58□□□□□ -0.4
SOX4-201ENST00000244745 Q75L30 129 aa12.57□□□□□ -0.4
SOX4-201ENST00000244745 WWC2-AS2Q96NR7 200 aa12.56□□□□□ -0.4
SOX4-201ENST00000244745 LINC00304Q8N9R0 145 aa12.55□□□□□ -0.4
SOX4-201ENST00000244745 PRR26Q8N8Z3 221 aa12.52□□□□□ -0.41
SOX4-201ENST00000244745 BRCA2P51587 3418 aa12.51□□□□□ -0.41
SOX4-201ENST00000244745 IGLV7-46A0A075B6I9 117 aa12.51□□□□□ -0.41
SOX4-201ENST00000244745 CRIPTQ9P021 101 aa12.5□□□□□ -0.41
SOX4-201ENST00000244745 Q8N9P0 234 aaPredicted RBP12.46□□□□□ -0.42
SOX4-201ENST00000244745 Q8N1X5 172 aa12.43□□□□□ -0.42
SOX4-201ENST00000244745 Q5VV11 94 aa12.43□□□□□ -0.42
SOX4-201ENST00000244745 CFAP54Q96N23 3096 aa12.42□□□□□ -0.42
SOX4-201ENST00000244745 SMR3BP02814 79 aaPredicted RBP12.41□□□□□ -0.42
SOX4-201ENST00000244745 TRANK1O15050 2925 aa12.41□□□□□ -0.42
SOX4-201ENST00000244745 LINC01558Q9Y6Z2 57 aa12.4□□□□□ -0.42
SOX4-201ENST00000244745 F8P00451 2351 aa12.39□□□□□ -0.43
SOX4-201ENST00000244745 LAMA3Q16787 3333 aa12.39□□□□□ -0.43
SOX4-201ENST00000244745 FASNP49327 2511 aaKnown RBP12.38□□□□□ -0.43
SOX4-201ENST00000244745 RANBP2P49792 3224 aaKnown RBP12.38□□□□□ -0.43
SOX4-201ENST00000244745 CR1P17927 2039 aa12.37□□□□□ -0.43
SOX4-201ENST00000244745 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.36□□□□□ -0.43
SOX4-201ENST00000244745 PRAC1Q96KF2 57 aa12.35□□□□□ -0.43
SOX4-201ENST00000244745 LAMA2P24043 3122 aaKnown RBP12.33□□□□□ -0.44
SOX4-201ENST00000244745 MMP24-AS1A0A0U1RRL7 71 aa12.33□□□□□ -0.44
SOX4-201ENST00000244745 A0A0D9SG42 100 aa12.32□□□□□ -0.44
SOX4-201ENST00000244745 HRES1P13985 223 aa12.31□□□□□ -0.44
SOX4-201ENST00000244745 SPRR1AP35321 89 aa12.31□□□□□ -0.44
SOX4-201ENST00000244745 LINC01554Q52M75 96 aa12.31□□□□□ -0.44
SOX4-201ENST00000244745 UNC80Q8N2C7 3258 aa12.26□□□□□ -0.45
SOX4-201ENST00000244745 SPINK7P58062 85 aa12.25□□□□□ -0.45
SOX4-201ENST00000244745 H3BS24 57 aa12.24□□□□□ -0.45
SOX4-201ENST00000244745 TNP2Q05952 138 aa12.22□□□□□ -0.45
SOX4-201ENST00000244745 CDH23Q9H251 3354 aa12.18□□□□□ -0.46
SOX4-201ENST00000244745 TRIOO75962 3097 aa12.18□□□□□ -0.46
SOX4-201ENST00000244745 KRTAP26-1Q6PEX3 210 aa12.18□□□□□ -0.46
SOX4-201ENST00000244745 EPG5Q9HCE0 2579 aa12.16□□□□□ -0.46
SOX4-201ENST00000244745 LINC00472Q9H8W2 130 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms