RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ANAPC11Q9NYG5 84 aa5.07□□□□□ -1.6
RIF1-201ENST00000243326 CHD7Q9P2D1 2997 aa5.06□□□□□ -1.6
RIF1-201ENST00000243326 LIMD2Q9BT23 127 aa5.06□□□□□ -1.6
RIF1-201ENST00000243326 EPM2AB3EWF7 344 aa5.06□□□□□ -1.6
RIF1-201ENST00000243326 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
RIF1-201ENST00000243326 Q6ZRP5 223 aa5.05□□□□□ -1.6
RIF1-201ENST00000243326 SSBP3-AS1Q7Z2R9 100 aa5.05□□□□□ -1.6
RIF1-201ENST00000243326 KMT2BQ9UMN6 2715 aaPredicted RBP5.05□□□□□ -1.6
RIF1-201ENST00000243326 NUPR2A6NF83 97 aa5.05□□□□□ -1.6
RIF1-201ENST00000243326 LOC110117498A0A087WWA1 95 aa5.05□□□□□ -1.6
RIF1-201ENST00000243326 FRYLO94915 3013 aa5.04□□□□□ -1.6
RIF1-201ENST00000243326 DSCR10P59022 87 aa5.03□□□□□ -1.6
RIF1-201ENST00000243326 PRO3102Q9H379 93 aa5.03□□□□□ -1.6
RIF1-201ENST00000243326 APCP25054 2843 aa5.03□□□□□ -1.6
RIF1-201ENST00000243326 ITPR1Q14643 2758 aa5.03□□□□□ -1.6
RIF1-201ENST00000243326 CYSTM1Q9H1C7 97 aa5.03□□□□□ -1.6
RIF1-201ENST00000243326 UBR5O95071 2799 aaPredicted RBP5.03□□□□□ -1.6
RIF1-201ENST00000243326 Q8NBF4 154 aa5.02□□□□□ -1.61
RIF1-201ENST00000243326 Q6ZRX8 168 aa5.02□□□□□ -1.61
RIF1-201ENST00000243326 TRAV22A0A0B4J277 110 aa5.02□□□□□ -1.61
RIF1-201ENST00000243326 DNAH10OSP0CZ25 163 aa5.01□□□□□ -1.61
RIF1-201ENST00000243326 H7BZZ5 65 aa5.01□□□□□ -1.61
RIF1-201ENST00000243326 Q96NJ1 140 aa5.01□□□□□ -1.61
RIF1-201ENST00000243326 FAM229BQ4G0N7 80 aa5.01□□□□□ -1.61
RIF1-201ENST00000243326 C15orf56Q8N910 161 aa5□□□□□ -1.61
RIF1-201ENST00000243326 ACYP2P14621 99 aa5□□□□□ -1.61
RIF1-201ENST00000243326 CASC10Q5T4H9 136 aa5□□□□□ -1.61
RIF1-201ENST00000243326 LINC01600Q96MT4 127 aa5□□□□□ -1.61
RIF1-201ENST00000243326 C16orf95Q9H693 158 aa4.99□□□□□ -1.61
RIF1-201ENST00000243326 C9orf92A6NGG3 77 aa4.99□□□□□ -1.61
RIF1-201ENST00000243326 GOLGB1Q14789 3259 aaKnown RBP4.99□□□□□ -1.61
RIF1-201ENST00000243326 C1orf134Q5TEV5 83 aa4.99□□□□□ -1.61
RIF1-201ENST00000243326 IGLV6-57P01721 117 aa4.99□□□□□ -1.61
RIF1-201ENST00000243326 ASH1LQ9NR48 2969 aaKnown RBP4.99□□□□□ -1.61
RIF1-201ENST00000243326 C8orf87E5RJ46 101 aa4.99□□□□□ -1.61
RIF1-201ENST00000243326 A0A0D9SG42 100 aa4.99□□□□□ -1.61
RIF1-201ENST00000243326 ERC2-IT1O76042 136 aa4.98□□□□□ -1.61
RIF1-201ENST00000243326 LINC00313P59037 77 aa4.98□□□□□ -1.61
RIF1-201ENST00000243326 LINC00588Q9Y4M8 146 aa4.97□□□□□ -1.61
RIF1-201ENST00000243326 IGFL1Q6UW32 110 aa4.96□□□□□ -1.61
RIF1-201ENST00000243326 APLNQ9ULZ1 77 aa4.96□□□□□ -1.61
RIF1-201ENST00000243326 NF1P21359 2839 aa4.96□□□□□ -1.62
RIF1-201ENST00000243326 Q8N1X5 172 aa4.96□□□□□ -1.62
RIF1-201ENST00000243326 Q8N377 158 aa4.96□□□□□ -1.62
RIF1-201ENST00000243326 OBSCN-AS1Q96MR7 158 aa4.96□□□□□ -1.62
RIF1-201ENST00000243326 KALRNO60229 2985 aa4.95□□□□□ -1.62
RIF1-201ENST00000243326 RTL8CO15255 209 aa4.95□□□□□ -1.62
RIF1-201ENST00000243326 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
RIF1-201ENST00000243326 Q8NAQ8 132 aa4.94□□□□□ -1.62
RIF1-201ENST00000243326 NIPBLQ6KC79 2804 aaeCLIP4.94□□□□□ -1.621e-8■■□□□ 13.7
RIF1-201ENST00000243326 DCHS2Q6V1P9 2916 aa4.94□□□□□ -1.62
RIF1-201ENST00000243326 ZNF575Q86XF7 245 aa4.94□□□□□ -1.62
RIF1-201ENST00000243326 KRTAP10-3P60369 221 aa4.93□□□□□ -1.62
RIF1-201ENST00000243326 DMXL2Q8TDJ6 3036 aa4.93□□□□□ -1.62
RIF1-201ENST00000243326 EP400Q96L91 3159 aa4.93□□□□□ -1.62
RIF1-201ENST00000243326 MIR22HGQ0VDD5 57 aa4.92□□□□□ -1.62
RIF1-201ENST00000243326 BCE1O60756 84 aa4.92□□□□□ -1.62
RIF1-201ENST00000243326 FRYQ5TBA9 3013 aa4.92□□□□□ -1.62
RIF1-201ENST00000243326 KRTAP10-11P60412 298 aa4.92□□□□□ -1.62
RIF1-201ENST00000243326 IGLV1-50A0A075B6I6 118 aa4.92□□□□□ -1.62
RIF1-201ENST00000243326 A0A1W2PNM2 257 aa4.92□□□□□ -1.62
RIF1-201ENST00000243326 C8orf17Q9NRJ1 99 aa4.92□□□□□ -1.62
RIF1-201ENST00000243326 A8MWP4 228 aa4.92□□□□□ -1.62
RIF1-201ENST00000243326 GIG44P09565 113 aaPredicted RBP4.91□□□□□ -1.62
RIF1-201ENST00000243326 CRIPTQ9P021 101 aa4.91□□□□□ -1.62
RIF1-201ENST00000243326 PRR26Q8N8Z3 221 aa4.91□□□□□ -1.62
RIF1-201ENST00000243326 PRR15Q8IV56 129 aa4.91□□□□□ -1.62
RIF1-201ENST00000243326 LINC00528Q8N1L1 170 aa4.91□□□□□ -1.62
RIF1-201ENST00000243326 WIPF1O43516 503 aa4.9□□□□□ -1.62
RIF1-201ENST00000243326 TYMSOSQ8TAI1 123 aa4.9□□□□□ -1.62
RIF1-201ENST00000243326 LOC101927531A0A1B0GV80 90 aa4.9□□□□□ -1.62
RIF1-201ENST00000243326 C16orf90A8MZG2 172 aa4.9□□□□□ -1.63
RIF1-201ENST00000243326 SMR3BP02814 79 aaPredicted RBP4.9□□□□□ -1.63
RIF1-201ENST00000243326 MRPL34Q9BQ48 92 aaKnown RBP4.9□□□□□ -1.63
RIF1-201ENST00000243326 KLKP1Q107X0 134 aa4.89□□□□□ -1.63
RIF1-201ENST00000243326 GVQW2A0A096LPI5 108 aaPredicted RBP4.89□□□□□ -1.63
RIF1-201ENST00000243326 OXTP01178 125 aa4.89□□□□□ -1.63
RIF1-201ENST00000243326 Q5XG85 94 aa4.89□□□□□ -1.63
RIF1-201ENST00000243326 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
RIF1-201ENST00000243326 TP53AIP1Q9HCN2 124 aa4.89□□□□□ -1.63
RIF1-201ENST00000243326 CSNK1G2-AS1Q8NCQ2 148 aa4.88□□□□□ -1.63
RIF1-201ENST00000243326 LINC01554Q52M75 96 aa4.88□□□□□ -1.63
RIF1-201ENST00000243326 KRTAP24-1Q3LI83 254 aa4.88□□□□□ -1.63
RIF1-201ENST00000243326 PRUNE2Q8WUY3 3088 aa4.88□□□□□ -1.63
RIF1-201ENST00000243326 CD164Q04900 197 aa4.88□□□□□ -1.63
RIF1-201ENST00000243326 UTRNP46939 3433 aa4.88□□□□□ -1.63
RIF1-201ENST00000243326 F8WDY8 70 aa4.87□□□□□ -1.63
RIF1-201ENST00000243326 Q8NDZ9 215 aa4.87□□□□□ -1.63
RIF1-201ENST00000243326 PDZD2O15018 2839 aa4.87□□□□□ -1.63
RIF1-201ENST00000243326 RBM12B-AS1Q9P1G2 102 aa4.87□□□□□ -1.63
RIF1-201ENST00000243326 KCNQ1DNQ9H478 68 aa4.86□□□□□ -1.63
RIF1-201ENST00000243326 H3BS24 57 aa4.86□□□□□ -1.63
RIF1-201ENST00000243326 LCA10Q71F78 164 aa4.86□□□□□ -1.63
RIF1-201ENST00000243326 FREM2Q5SZK8 3169 aa4.86□□□□□ -1.63
RIF1-201ENST00000243326 FAM104AQ969W3 186 aa4.85□□□□□ -1.63
RIF1-201ENST00000243326 HIVEP1P15822 2718 aa4.85□□□□□ -1.63
RIF1-201ENST00000243326 ZZEF1O43149 2961 aa4.85□□□□□ -1.63
RIF1-201ENST00000243326 TACC2O95359 2948 aa4.84□□□□□ -1.63
RIF1-201ENST00000243326 A0A1B0GVX0 72 aa4.84□□□□□ -1.63
RIF1-201ENST00000243326 NBEAQ8NFP9 2946 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms