RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 LUZP6Q538Z0 58 aa9.23□□□□□ -0.93
TARDBP-201ENST00000240185 A0A1B0GVX0 72 aa9.22□□□□□ -0.93
TARDBP-201ENST00000240185 MTORP42345 2549 aa9.21□□□□□ -0.94
TARDBP-201ENST00000240185 WIPF1O43516 503 aa9.21□□□□□ -0.94
TARDBP-201ENST00000240185 Q8N377 158 aa9.2□□□□□ -0.94
TARDBP-201ENST00000240185 LINC01554Q52M75 96 aa9.2□□□□□ -0.94
TARDBP-201ENST00000240185 PTPRBP23467 1997 aa9.2□□□□□ -0.94
TARDBP-201ENST00000240185 CPAMD8Q8IZJ3 1885 aa9.2□□□□□ -0.94
TARDBP-201ENST00000240185 LINC00588Q9Y4M8 146 aa9.2□□□□□ -0.94
TARDBP-201ENST00000240185 SPANXA2-OT1Q8N9U9 137 aa9.19□□□□□ -0.94
TARDBP-201ENST00000240185 NBDYA0A0U1RRE5 68 aa9.18□□□□□ -0.94
TARDBP-201ENST00000240185 A0A0G2JQZ4 141 aa9.18□□□□□ -0.94
TARDBP-201ENST00000240185 A0A1W2PNN7 141 aa9.18□□□□□ -0.94
TARDBP-201ENST00000240185 A0A0D9SG42 100 aa9.17□□□□□ -0.94
TARDBP-201ENST00000240185 FAM104AQ969W3 186 aa9.17□□□□□ -0.94
TARDBP-201ENST00000240185 RBM12B-AS1Q9P1G2 102 aa9.16□□□□□ -0.94
TARDBP-201ENST00000240185 Q8NAQ8 132 aa9.16□□□□□ -0.94
TARDBP-201ENST00000240185 OBSCN-AS1Q96MR7 158 aa9.15□□□□□ -0.94
TARDBP-201ENST00000240185 C5orf42Q9H799 3197 aa9.15□□□□□ -0.95
TARDBP-201ENST00000240185 CEP295Q9C0D2 2601 aa9.14□□□□□ -0.95
TARDBP-201ENST00000240185 H3BS24 57 aa9.14□□□□□ -0.95
TARDBP-201ENST00000240185 Q1T7F1 81 aa9.13□□□□□ -0.95
TARDBP-201ENST00000240185 CDH23Q9H251 3354 aa9.12□□□□□ -0.95
TARDBP-201ENST00000240185 DNAH10OSP0CZ25 163 aa9.12□□□□□ -0.95
TARDBP-201ENST00000240185 PRR26Q8N8Z3 221 aa9.09□□□□□ -0.95
TARDBP-201ENST00000240185 ANKRD11Q6UB99 2663 aaPredicted RBP9.09□□□□□ -0.95
TARDBP-201ENST00000240185 COX6B2Q6YFQ2 88 aa9.08□□□□□ -0.96
TARDBP-201ENST00000240185 C9orf163Q8N9P6 203 aa9.08□□□□□ -0.96
TARDBP-201ENST00000240185 A0A1W2PNM2 257 aa9.08□□□□□ -0.96
TARDBP-201ENST00000240185 IGLV5-48A0A075B6I7 105 aa9.07□□□□□ -0.96
TARDBP-201ENST00000240185 C9orf92A6NGG3 77 aa9.06□□□□□ -0.96
TARDBP-201ENST00000240185 Q8N1X5 172 aa9.06□□□□□ -0.96
TARDBP-201ENST00000240185 CHD7Q9P2D1 2997 aa9.06□□□□□ -0.96
TARDBP-201ENST00000240185 UNC80Q8N2C7 3258 aa9.05□□□□□ -0.96
TARDBP-201ENST00000240185 POLQO75417 2590 aa9.05□□□□□ -0.96
TARDBP-201ENST00000240185 RANBP2P49792 3224 aaKnown RBP9.05□□□□□ -0.96
TARDBP-201ENST00000240185 C15orf56Q8N910 161 aa9.04□□□□□ -0.96
TARDBP-201ENST00000240185 ZNF861PO60384 105 aa9.04□□□□□ -0.96
TARDBP-201ENST00000240185 PRR34Q9NV39 138 aa9.04□□□□□ -0.96
TARDBP-201ENST00000240185 OCR1Q9BZK8 76 aa9.03□□□□□ -0.96
TARDBP-201ENST00000240185 LINC00304Q8N9R0 145 aa9.03□□□□□ -0.96
TARDBP-201ENST00000240185 SPTBN4Q9H254 2564 aa9.03□□□□□ -0.96
TARDBP-201ENST00000240185 CHD8Q9HCK8 2581 aa9.03□□□□□ -0.96
TARDBP-201ENST00000240185 IGLV5-37A0A075B6J1 123 aa9.03□□□□□ -0.96
TARDBP-201ENST00000240185 KLK9Q2XQG4 91 aa9.01□□□□□ -0.97
TARDBP-201ENST00000240185 ANAPC11Q9NYG5 84 aa9□□□□□ -0.97
TARDBP-201ENST00000240185 Q75L30 129 aa8.99□□□□□ -0.97
TARDBP-201ENST00000240185 PRAC1Q96KF2 57 aa8.99□□□□□ -0.97
TARDBP-201ENST00000240185 CSNK1G2-AS1Q8NCQ2 148 aa8.97□□□□□ -0.97
TARDBP-201ENST00000240185 PLA2G2DQ9UNK4 145 aa8.97□□□□□ -0.97
TARDBP-201ENST00000240185 Q5XG85 94 aa8.96□□□□□ -0.97
TARDBP-201ENST00000240185 XIRP2A4UGR9 3374 aa8.96□□□□□ -0.98
TARDBP-201ENST00000240185 TLX1NBP0CAT3 122 aa8.95□□□□□ -0.98
TARDBP-201ENST00000240185 ZNF575Q86XF7 245 aa8.95□□□□□ -0.98
TARDBP-201ENST00000240185 A0A1B0GU33 70 aa8.94□□□□□ -0.98
TARDBP-201ENST00000240185 CHD9Q3L8U1 2897 aa8.94□□□□□ -0.98
TARDBP-201ENST00000240185 IGLV7-46A0A075B6I9 117 aa8.94□□□□□ -0.98
TARDBP-201ENST00000240185 A0A0A0MQY5 61 aa8.93□□□□□ -0.98
TARDBP-201ENST00000240185 SZT2Q5T011 3432 aa8.92□□□□□ -0.98
TARDBP-201ENST00000240185 SPRR4Q96PI1 79 aa8.92□□□□□ -0.98
TARDBP-201ENST00000240185 USP24Q9UPU5 2620 aa8.91□□□□□ -0.98
TARDBP-201ENST00000240185 FAM229BQ4G0N7 80 aa8.91□□□□□ -0.98
TARDBP-201ENST00000240185 DNAH14Q0VDD8 3507 aa8.91□□□□□ -0.98
TARDBP-201ENST00000240185 Q8N9P0 234 aaPredicted RBP8.9□□□□□ -0.98
TARDBP-201ENST00000240185 COL27A1Q8IZC6 1860 aaPredicted RBP8.9□□□□□ -0.98
TARDBP-201ENST00000240185 FP248Q71RG6 208 aaPredicted RBP8.9□□□□□ -0.98
TARDBP-201ENST00000240185 KRTAP24-1Q3LI83 254 aa8.89□□□□□ -0.99
TARDBP-201ENST00000240185 LINC01558Q9Y6Z2 57 aa8.89□□□□□ -0.99
TARDBP-201ENST00000240185 J3QL48 77 aa8.88□□□□□ -0.99
TARDBP-201ENST00000240185 IGLV7-43P04211 117 aa8.87□□□□□ -0.99
TARDBP-201ENST00000240185 LINC00483Q53H64 154 aa8.87□□□□□ -0.99
TARDBP-201ENST00000240185 PSORS1C2Q9UIG4 136 aa8.86□□□□□ -0.99
TARDBP-201ENST00000240185 CSAG1Q6PB30 78 aa8.86□□□□□ -0.99
TARDBP-201ENST00000240185 FASNP49327 2511 aaKnown RBP8.85□□□□□ -0.99
TARDBP-201ENST00000240185 HRES1P13985 223 aa8.85□□□□□ -0.99
TARDBP-201ENST00000240185 CAMK2N1Q7Z7J9 78 aa8.85□□□□□ -0.99
TARDBP-201ENST00000240185 ANKRD17O75179 2603 aaKnown RBP8.83□□□□□ -1
TARDBP-201ENST00000240185 GIG44P09565 113 aaPredicted RBP8.83□□□□□ -1
TARDBP-201ENST00000240185 CR1P17927 2039 aa8.83□□□□□ -1
TARDBP-201ENST00000240185 A0A087WTM6 91 aa8.83□□□□□ -1
TARDBP-201ENST00000240185 SPTBN5Q9NRC6 3674 aaKnown RBP8.83□□□□□ -1
TARDBP-201ENST00000240185 CYSTM1Q9H1C7 97 aa8.82□□□□□ -1
TARDBP-201ENST00000240185 DMAC1Q96GE9 116 aa8.82□□□□□ -1
TARDBP-201ENST00000240185 LINC00612Q8N6U2 182 aa8.82□□□□□ -1
TARDBP-201ENST00000240185 EYSQ5T1H1 3165 aa8.82□□□□□ -1
TARDBP-201ENST00000240185 Q5VV11 94 aa8.81□□□□□ -1
TARDBP-201ENST00000240185 PRUNE2Q8WUY3 3088 aa8.81□□□□□ -1
TARDBP-201ENST00000240185 TRANK1O15050 2925 aa8.81□□□□□ -1
TARDBP-201ENST00000240185 REV3LO60673 3130 aa8.8□□□□□ -1
TARDBP-201ENST00000240185 FLG2Q5D862 2391 aaPredicted RBP8.8□□□□□ -1
TARDBP-201ENST00000240185 CASC10Q5T4H9 136 aa8.79□□□□□ -1
TARDBP-201ENST00000240185 WWC2-AS2Q96NR7 200 aa8.79□□□□□ -1
TARDBP-201ENST00000240185 SMR3BP02814 79 aaPredicted RBP8.79□□□□□ -1
TARDBP-201ENST00000240185 PCSK5Q92824 1860 aa8.79□□□□□ -1
TARDBP-201ENST00000240185 C19orf73Q9NVV2 129 aa8.76□□□□□ -1.01
TARDBP-201ENST00000240185 SPINK7P58062 85 aa8.76□□□□□ -1.01
TARDBP-201ENST00000240185 CNBPP62633 177 aaKnown RBP8.76□□□□□ -1.01
TARDBP-201ENST00000240185 MGAM2Q2M2H8 2515 aa8.76□□□□□ -1.01
TARDBP-201ENST00000240185 A0A096LNT2 108 aa8.75□□□□□ -1.01
TARDBP-201ENST00000240185 PRRC2CQ9Y520 2896 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms