RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 C9orf92A6NGG3 77 aa8.72□□□□□ -1.01
NEK4-201ENST00000233027 OBSCN-AS1Q96MR7 158 aa8.72□□□□□ -1.01
NEK4-201ENST00000233027 UQCR11O14957 56 aa8.71□□□□□ -1.01
NEK4-201ENST00000233027 ZFYVE26Q68DK2 2539 aa8.71□□□□□ -1.01
NEK4-201ENST00000233027 CASC10Q5T4H9 136 aa8.7□□□□□ -1.02
NEK4-201ENST00000233027 K7EIL1 84 aa8.7□□□□□ -1.02
NEK4-201ENST00000233027 A0A096LNT2 108 aa8.7□□□□□ -1.02
NEK4-201ENST00000233027 MIR22HGQ0VDD5 57 aa8.7□□□□□ -1.02
NEK4-201ENST00000233027 LINC00612Q8N6U2 182 aa8.68□□□□□ -1.02
NEK4-201ENST00000233027 APLNQ9ULZ1 77 aa8.68□□□□□ -1.02
NEK4-201ENST00000233027 ZNF861PO60384 105 aa8.67□□□□□ -1.02
NEK4-201ENST00000233027 CEP295Q9C0D2 2601 aa8.67□□□□□ -1.02
NEK4-201ENST00000233027 A0A1W2PNM2 257 aa8.66□□□□□ -1.02
NEK4-201ENST00000233027 ANKRD17O75179 2603 aaKnown RBP8.66□□□□□ -1.02
NEK4-201ENST00000233027 TLX1NBP0CAT3 122 aa8.66□□□□□ -1.02
NEK4-201ENST00000233027 PLA2G2DQ9UNK4 145 aa8.66□□□□□ -1.02
NEK4-201ENST00000233027 USP9YO00507 2555 aaPredicted RBP8.65□□□□□ -1.02
NEK4-201ENST00000233027 PKD1L2Q7Z442 2459 aa8.65□□□□□ -1.02
NEK4-201ENST00000233027 UTRNP46939 3433 aa8.63□□□□□ -1.03
NEK4-201ENST00000233027 LINC00304Q8N9R0 145 aa8.63□□□□□ -1.03
NEK4-201ENST00000233027 WWC2-AS2Q96NR7 200 aa8.63□□□□□ -1.03
NEK4-201ENST00000233027 ZNF575Q86XF7 245 aa8.62□□□□□ -1.03
NEK4-201ENST00000233027 A0A087WTM6 91 aa8.62□□□□□ -1.03
NEK4-201ENST00000233027 ZNF462Q96JM2 2506 aa8.62□□□□□ -1.03
NEK4-201ENST00000233027 SMR3BP02814 79 aaPredicted RBP8.59□□□□□ -1.03
NEK4-201ENST00000233027 POLQO75417 2590 aa8.59□□□□□ -1.03
NEK4-201ENST00000233027 C9orf163Q8N9P6 203 aa8.59□□□□□ -1.03
NEK4-201ENST00000233027 PSORS1C2Q9UIG4 136 aa8.59□□□□□ -1.03
NEK4-201ENST00000233027 SPRR4Q96PI1 79 aa8.57□□□□□ -1.04
NEK4-201ENST00000233027 KTN1-AS1Q86SY8 53 aa8.57□□□□□ -1.04
NEK4-201ENST00000233027 IGLV7-43P04211 117 aa8.57□□□□□ -1.04
NEK4-201ENST00000233027 Q8N1X5 172 aa8.56□□□□□ -1.04
NEK4-201ENST00000233027 CRIPTQ9P021 101 aa8.55□□□□□ -1.04
NEK4-201ENST00000233027 MTORP42345 2549 aa8.54□□□□□ -1.04
NEK4-201ENST00000233027 CHD8Q9HCK8 2581 aa8.54□□□□□ -1.04
NEK4-201ENST00000233027 CD164Q04900 197 aa8.54□□□□□ -1.04
NEK4-201ENST00000233027 SPTBN4Q9H254 2564 aa8.53□□□□□ -1.04
NEK4-201ENST00000233027 A0A0D9SG42 100 aa8.53□□□□□ -1.04
NEK4-201ENST00000233027 FAM104AQ969W3 186 aa8.53□□□□□ -1.04
NEK4-201ENST00000233027 SPANXA2-OT1Q8N9U9 137 aa8.52□□□□□ -1.05
NEK4-201ENST00000233027 KRTAP1-3Q8IUG1 177 aa8.52□□□□□ -1.05
NEK4-201ENST00000233027 IGLV5-48A0A075B6I7 105 aa8.51□□□□□ -1.05
NEK4-201ENST00000233027 J3QL48 77 aa8.51□□□□□ -1.05
NEK4-201ENST00000233027 CNBPP62633 177 aaKnown RBP8.51□□□□□ -1.05
NEK4-201ENST00000233027 OCR1Q9BZK8 76 aa8.51□□□□□ -1.05
NEK4-201ENST00000233027 COX6B2Q6YFQ2 88 aa8.5□□□□□ -1.05
NEK4-201ENST00000233027 ACANP16112 2415 aa8.5□□□□□ -1.05
NEK4-201ENST00000233027 LCA10Q71F78 164 aa8.49□□□□□ -1.05
NEK4-201ENST00000233027 CDC42SE1Q9NRR8 79 aa8.48□□□□□ -1.05
NEK4-201ENST00000233027 C5orf42Q9H799 3197 aa8.47□□□□□ -1.05
NEK4-201ENST00000233027 IGLV5-37A0A075B6J1 123 aa8.47□□□□□ -1.05
NEK4-201ENST00000233027 CEP350Q5VT06 3117 aa8.47□□□□□ -1.05
NEK4-201ENST00000233027 LINC01554Q52M75 96 aa8.46□□□□□ -1.06
NEK4-201ENST00000233027 PRR26Q8N8Z3 221 aa8.46□□□□□ -1.06
NEK4-201ENST00000233027 KRTAP1-1Q07627 177 aa8.45□□□□□ -1.06
NEK4-201ENST00000233027 Q1T7F1 81 aa8.43□□□□□ -1.06
NEK4-201ENST00000233027 FAM229BQ4G0N7 80 aa8.43□□□□□ -1.06
NEK4-201ENST00000233027 BPTFQ12830 3046 aa8.42□□□□□ -1.06
NEK4-201ENST00000233027 CYSTM1Q9H1C7 97 aa8.41□□□□□ -1.06
NEK4-201ENST00000233027 Q8NDZ9 215 aa8.4□□□□□ -1.06
NEK4-201ENST00000233027 PCNTO95613 3336 aa8.39□□□□□ -1.07
NEK4-201ENST00000233027 CR1P17927 2039 aa8.38□□□□□ -1.07
NEK4-201ENST00000233027 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.37□□□□□ -1.07
NEK4-201ENST00000233027 RBM12B-AS1Q9P1G2 102 aa8.36□□□□□ -1.07
NEK4-201ENST00000233027 PRRC2CQ9Y520 2896 aaKnown RBP8.35□□□□□ -1.07
NEK4-201ENST00000233027 Q5XG85 94 aa8.35□□□□□ -1.07
NEK4-201ENST00000233027 IGLV7-46A0A075B6I9 117 aa8.35□□□□□ -1.07
NEK4-201ENST00000233027 HRES1P13985 223 aa8.34□□□□□ -1.07
NEK4-201ENST00000233027 TNP2Q05952 138 aa8.34□□□□□ -1.07
NEK4-201ENST00000233027 Q75L30 129 aa8.3□□□□□ -1.08
NEK4-201ENST00000233027 FASNP49327 2511 aaKnown RBP8.3□□□□□ -1.08
NEK4-201ENST00000233027 MMP24-AS1A0A0U1RRL7 71 aa8.29□□□□□ -1.08
NEK4-201ENST00000233027 F8P00451 2351 aa8.29□□□□□ -1.08
NEK4-201ENST00000233027 FP248Q71RG6 208 aaPredicted RBP8.28□□□□□ -1.08
NEK4-201ENST00000233027 Q8N9P0 234 aaPredicted RBP8.27□□□□□ -1.09
NEK4-201ENST00000233027 WIPF1O43516 503 aa8.26□□□□□ -1.09
NEK4-201ENST00000233027 A0A1B0GU33 70 aa8.25□□□□□ -1.09
NEK4-201ENST00000233027 PRAC1Q96KF2 57 aa8.23□□□□□ -1.09
NEK4-201ENST00000233027 CHD7Q9P2D1 2997 aa8.23□□□□□ -1.09
NEK4-201ENST00000233027 LINC01558Q9Y6Z2 57 aa8.22□□□□□ -1.09
NEK4-201ENST00000233027 SPRR1AP35321 89 aa8.2□□□□□ -1.1
NEK4-201ENST00000233027 Q5VV11 94 aa8.19□□□□□ -1.1
NEK4-201ENST00000233027 Q6ZSA8 131 aa8.19□□□□□ -1.1
NEK4-201ENST00000233027 SPINK7P58062 85 aa8.17□□□□□ -1.1
NEK4-201ENST00000233027 Q5W150 140 aa8.16□□□□□ -1.1
NEK4-201ENST00000233027 ZCCHC13Q8WW36 166 aaKnown RBP8.16□□□□□ -1.1
NEK4-201ENST00000233027 OXTP01178 125 aa8.16□□□□□ -1.1
NEK4-201ENST00000233027 LINC00472Q9H8W2 130 aa8.15□□□□□ -1.1
NEK4-201ENST00000233027 PLAC8Q9NZF1 115 aa8.15□□□□□ -1.11
NEK4-201ENST00000233027 LUZP6Q538Z0 58 aa8.13□□□□□ -1.11
NEK4-201ENST00000233027 MKI67P46013 3256 aaKnown RBP8.12□□□□□ -1.11
NEK4-201ENST00000233027 CAMK2N1Q7Z7J9 78 aa8.11□□□□□ -1.11
NEK4-201ENST00000233027 A0A0C4DFX4 3053 aa8.1□□□□□ -1.11
NEK4-201ENST00000233027 CSAG1Q6PB30 78 aa8.1□□□□□ -1.11
NEK4-201ENST00000233027 KRTAP1-5Q9BYS1 174 aa8.09□□□□□ -1.11
NEK4-201ENST00000233027 S4R3F8 94 aa8.09□□□□□ -1.11
NEK4-201ENST00000233027 USP24Q9UPU5 2620 aa8.09□□□□□ -1.12
NEK4-201ENST00000233027 CFAP54Q96N23 3096 aa8.09□□□□□ -1.12
NEK4-201ENST00000233027 KRTAP26-1Q6PEX3 210 aa8.08□□□□□ -1.12
NEK4-201ENST00000233027 SPRR1BP22528 89 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms