RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 TRAV22A0A0B4J277 110 aa9.48□□□□□ -0.89
PCDHB3-201ENST00000231130 hDV103S1A0JD37 113 aa9.48□□□□□ -0.89
PCDHB3-201ENST00000231130 IGKV4-1P06312 121 aa9.48□□□□□ -0.89
PCDHB3-201ENST00000231130 ZNF73O43830 326 aaPredicted RBP9.48□□□□□ -0.89
PCDHB3-201ENST00000231130 C9orf66Q5T8R8 295 aa9.46□□□□□ -0.89
PCDHB3-201ENST00000231130 ERC2-IT1O76042 136 aa9.46□□□□□ -0.9
PCDHB3-201ENST00000231130 CD164Q04900 197 aa9.46□□□□□ -0.9
PCDHB3-201ENST00000231130 C6orf48Q9UBA6 75 aa9.46□□□□□ -0.9
PCDHB3-201ENST00000231130 TENM1Q9UKZ4 2725 aa9.46□□□□□ -0.9
PCDHB3-201ENST00000231130 CHKB-CPT1BH3BT56 60 aa9.46□□□□□ -0.9
PCDHB3-201ENST00000231130 Q6ZRU5 148 aa9.45□□□□□ -0.9
PCDHB3-201ENST00000231130 IGLV6-57P01721 117 aa9.45□□□□□ -0.9
PCDHB3-201ENST00000231130 CAMK2N2Q96S95 79 aa9.45□□□□□ -0.9
PCDHB3-201ENST00000231130 HECTD1Q9ULT8 2610 aa9.44□□□□□ -0.9
PCDHB3-201ENST00000231130 KRTAP1-3Q8IUG1 177 aa9.44□□□□□ -0.9
PCDHB3-201ENST00000231130 HELZ2Q9BYK8 2649 aaKnown RBP9.44□□□□□ -0.9
PCDHB3-201ENST00000231130 SMR3AQ99954 134 aa9.44□□□□□ -0.9
PCDHB3-201ENST00000231130 BAHCC1Q9P281 2608 aa9.43□□□□□ -0.9
PCDHB3-201ENST00000231130 LINC00612Q8N6U2 182 aa9.4□□□□□ -0.9
PCDHB3-201ENST00000231130 TRRAPQ9Y4A5 3859 aa9.4□□□□□ -0.91
PCDHB3-201ENST00000231130 Q1T7F1 81 aa9.4□□□□□ -0.91
PCDHB3-201ENST00000231130 DEFB116Q30KQ4 102 aa9.4□□□□□ -0.91
PCDHB3-201ENST00000231130 A0A0J9YWU9 116 aa9.38□□□□□ -0.91
PCDHB3-201ENST00000231130 LYRM9A8MSI8 78 aa9.38□□□□□ -0.91
PCDHB3-201ENST00000231130 IGHV4-30-4P0DP06 118 aa9.38□□□□□ -0.91
PCDHB3-201ENST00000231130 H3BQ85 93 aa9.38□□□□□ -0.91
PCDHB3-201ENST00000231130 KRTAP10-3P60369 221 aa9.38□□□□□ -0.91
PCDHB3-201ENST00000231130 SYCNQ0VAF6 134 aa9.37□□□□□ -0.91
PCDHB3-201ENST00000231130 WFDC10BQ8IUB3 73 aa9.37□□□□□ -0.91
PCDHB3-201ENST00000231130 LELP1Q5T871 98 aa9.36□□□□□ -0.91
PCDHB3-201ENST00000231130 PRR15LQ9BU68 103 aa9.36□□□□□ -0.91
PCDHB3-201ENST00000231130 ELOF1P60002 83 aaKnown RBP9.35□□□□□ -0.91
PCDHB3-201ENST00000231130 UBE2BP63146 152 aa9.35□□□□□ -0.91
PCDHB3-201ENST00000231130 RBM12B-AS1Q9P1G2 102 aa9.35□□□□□ -0.91
PCDHB3-201ENST00000231130 SPART-AS1P0CW21 52 aa9.34□□□□□ -0.91
PCDHB3-201ENST00000231130 ST20-AS1Q8NBB2 130 aa9.34□□□□□ -0.91
PCDHB3-201ENST00000231130 TENM4Q6N022 2769 aa9.34□□□□□ -0.91
PCDHB3-201ENST00000231130 A6NED7 52 aa9.33□□□□□ -0.92
PCDHB3-201ENST00000231130 ETDCA0A1B0GVM5 59 aa9.33□□□□□ -0.92
PCDHB3-201ENST00000231130 RPL37AP8A6NKH3 93 aa9.33□□□□□ -0.92
PCDHB3-201ENST00000231130 PSCAO43653 123 aa9.33□□□□□ -0.92
PCDHB3-201ENST00000231130 VPREB1P12018 145 aa9.33□□□□□ -0.92
PCDHB3-201ENST00000231130 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.32□□□□□ -0.92
PCDHB3-201ENST00000231130 IGKV2D-24A0A075B6R9 120 aa9.32□□□□□ -0.92
PCDHB3-201ENST00000231130 WFDC13Q8IUB5 93 aa9.32□□□□□ -0.92
PCDHB3-201ENST00000231130 HCG22E2RYF7 251 aa9.3□□□□□ -0.92
PCDHB3-201ENST00000231130 M0R378 163 aa9.3□□□□□ -0.92
PCDHB3-201ENST00000231130 APOC4P55056 127 aa9.3□□□□□ -0.92
PCDHB3-201ENST00000231130 NKAPP1Q8N9T2 125 aa9.3□□□□□ -0.92
PCDHB3-201ENST00000231130 UBE2AP49459 152 aa9.3□□□□□ -0.92
PCDHB3-201ENST00000231130 LINC00208Q96KT6 92 aa9.3□□□□□ -0.92
PCDHB3-201ENST00000231130 KTN1-AS1Q86SY8 53 aa9.29□□□□□ -0.92
PCDHB3-201ENST00000231130 PRR34Q9NV39 138 aa9.29□□□□□ -0.92
PCDHB3-201ENST00000231130 Q8NAQ8 132 aa9.29□□□□□ -0.92
PCDHB3-201ENST00000231130 LINC00528Q8N1L1 170 aa9.28□□□□□ -0.92
PCDHB3-201ENST00000231130 KRTAP1-1Q07627 177 aa9.28□□□□□ -0.92
PCDHB3-201ENST00000231130 NOTCH1P46531 2555 aa9.28□□□□□ -0.92
PCDHB3-201ENST00000231130 MP68P56378 58 aa9.27□□□□□ -0.92
PCDHB3-201ENST00000231130 KPRPQ5T749 579 aaPredicted RBP9.27□□□□□ -0.92
PCDHB3-201ENST00000231130 Q5VV11 94 aa9.27□□□□□ -0.93
PCDHB3-201ENST00000231130 FLNBO75369 2602 aaKnown RBP9.27□□□□□ -0.93
PCDHB3-201ENST00000231130 OTOGQ6ZRI0 2925 aa9.27□□□□□ -0.93
PCDHB3-201ENST00000231130 A0A0G2JQZ4 141 aa9.26□□□□□ -0.93
PCDHB3-201ENST00000231130 A0A1W2PNN7 141 aa9.26□□□□□ -0.93
PCDHB3-201ENST00000231130 C16orf90A8MZG2 172 aa9.26□□□□□ -0.93
PCDHB3-201ENST00000231130 K7EQZ3 153 aa9.26□□□□□ -0.93
PCDHB3-201ENST00000231130 B9D2Q9BPU9 175 aa9.26□□□□□ -0.93
PCDHB3-201ENST00000231130 TENM3Q9P273 2699 aa9.26□□□□□ -0.93
PCDHB3-201ENST00000231130 MAST4O15021 2626 aa9.26□□□□□ -0.93
PCDHB3-201ENST00000231130 ANK3Q12955 4377 aaKnown RBP9.25□□□□□ -0.93
PCDHB3-201ENST00000231130 GVQW2A0A096LPI5 108 aaPredicted RBP9.24□□□□□ -0.93
PCDHB3-201ENST00000231130 EGFEM1PQ0D2K5 195 aa9.24□□□□□ -0.93
PCDHB3-201ENST00000231130 SERTAD4-AS1Q5TG53 156 aa9.24□□□□□ -0.93
PCDHB3-201ENST00000231130 LINC00588Q9Y4M8 146 aa9.24□□□□□ -0.93
PCDHB3-201ENST00000231130 Q8N377 158 aa9.23□□□□□ -0.93
PCDHB3-201ENST00000231130 C1orf137Q5JT78 98 aa9.23□□□□□ -0.93
PCDHB3-201ENST00000231130 C15orf56Q8N910 161 aa9.23□□□□□ -0.93
PCDHB3-201ENST00000231130 FAM168BA1KXE4 195 aa9.22□□□□□ -0.93
PCDHB3-201ENST00000231130 C7orf33Q8WU49 177 aa9.21□□□□□ -0.93
PCDHB3-201ENST00000231130 NDUFB1O75438 58 aa9.21□□□□□ -0.94
PCDHB3-201ENST00000231130 COL6A5A8TX70 2615 aa9.2□□□□□ -0.94
PCDHB3-201ENST00000231130 C11orf45Q8TAV5 145 aa9.2□□□□□ -0.94
PCDHB3-201ENST00000231130 A0A1W2PNM2 257 aa9.19□□□□□ -0.94
PCDHB3-201ENST00000231130 LIMD2Q9BT23 127 aa9.18□□□□□ -0.94
PCDHB3-201ENST00000231130 STAB1Q9NY15 2570 aa9.17□□□□□ -0.94
PCDHB3-201ENST00000231130 NSD1Q96L73 2696 aaPredicted RBP9.17□□□□□ -0.94
PCDHB3-201ENST00000231130 Q8N9P0 234 aaPredicted RBP9.17□□□□□ -0.94
PCDHB3-201ENST00000231130 ZCCHC13Q8WW36 166 aaKnown RBP9.16□□□□□ -0.94
PCDHB3-201ENST00000231130 CYP4F30PQ9H0H9 118 aa9.16□□□□□ -0.94
PCDHB3-201ENST00000231130 FBN1P35555 2871 aaKnown RBP9.16□□□□□ -0.94
PCDHB3-201ENST00000231130 NBEAL1Q6ZS30 2694 aa9.16□□□□□ -0.94
PCDHB3-201ENST00000231130 DSCR10P59022 87 aa9.16□□□□□ -0.94
PCDHB3-201ENST00000231130 INAFM1C9JVW0 142 aa9.15□□□□□ -0.94
PCDHB3-201ENST00000231130 OXLD1Q5BKU9 147 aa9.15□□□□□ -0.94
PCDHB3-201ENST00000231130 LCA10Q71F78 164 aa9.15□□□□□ -0.94
PCDHB3-201ENST00000231130 NDUFS5O43920 106 aa9.15□□□□□ -0.95
PCDHB3-201ENST00000231130 C4orf48Q5BLP8 95 aa9.15□□□□□ -0.95
PCDHB3-201ENST00000231130 ATP11AUNQ6ZP68 121 aa9.14□□□□□ -0.95
PCDHB3-201ENST00000231130 SRRM2Q9UQ35 2752 aaKnown RBP9.14□□□□□ -0.95
PCDHB3-201ENST00000231130 Q9BRP9 147 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms