RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 MIR22HGQ0VDD5 57 aa11.62□□□□□ -0.55
EXTL3-201ENST00000220562 SMR3BP02814 79 aaPredicted RBP11.6□□□□□ -0.55
EXTL3-201ENST00000220562 KLKP1Q107X0 134 aa11.6□□□□□ -0.55
EXTL3-201ENST00000220562 CASC10Q5T4H9 136 aa11.58□□□□□ -0.56
EXTL3-201ENST00000220562 ABCA12Q86UK0 2595 aa11.58□□□□□ -0.56
EXTL3-201ENST00000220562 IGLV7-43P04211 117 aa11.57□□□□□ -0.56
EXTL3-201ENST00000220562 C9orf163Q8N9P6 203 aa11.57□□□□□ -0.56
EXTL3-201ENST00000220562 FN1P02751 2386 aaKnown RBP11.56□□□□□ -0.56
EXTL3-201ENST00000220562 PIEZO1Q92508 2521 aa11.54□□□□□ -0.56
EXTL3-201ENST00000220562 PSORS1C2Q9UIG4 136 aa11.54□□□□□ -0.56
EXTL3-201ENST00000220562 JMJD1CQ15652 2540 aa11.53□□□□□ -0.56
EXTL3-201ENST00000220562 CRIPTQ9P021 101 aa11.53□□□□□ -0.56
EXTL3-201ENST00000220562 H7BZZ5 65 aa11.52□□□□□ -0.57
EXTL3-201ENST00000220562 SPRR4Q96PI1 79 aa11.52□□□□□ -0.57
EXTL3-201ENST00000220562 DOPEY1Q5JWR5 2465 aa11.5□□□□□ -0.57
EXTL3-201ENST00000220562 A0A1W2PNM2 257 aa11.49□□□□□ -0.57
EXTL3-201ENST00000220562 IGLV5-37A0A075B6J1 123 aa11.48□□□□□ -0.57
EXTL3-201ENST00000220562 CNBPP62633 177 aaKnown RBP11.47□□□□□ -0.57
EXTL3-201ENST00000220562 ZNF575Q86XF7 245 aa11.45□□□□□ -0.58
EXTL3-201ENST00000220562 Q8N1X5 172 aa11.43□□□□□ -0.58
EXTL3-201ENST00000220562 LINC00336Q6ZUF6 198 aa11.42□□□□□ -0.58
EXTL3-201ENST00000220562 KRTAP1-3Q8IUG1 177 aa11.42□□□□□ -0.58
EXTL3-201ENST00000220562 RBM12B-AS1Q9P1G2 102 aa11.42□□□□□ -0.58
EXTL3-201ENST00000220562 USP9XQ93008 2570 aaPredicted RBP11.41□□□□□ -0.58
EXTL3-201ENST00000220562 A0A0D9SG42 100 aa11.41□□□□□ -0.58
EXTL3-201ENST00000220562 IGLV5-48A0A075B6I7 105 aa11.4□□□□□ -0.58
EXTL3-201ENST00000220562 FAM104AQ969W3 186 aa11.4□□□□□ -0.59
EXTL3-201ENST00000220562 TLN2Q9Y4G6 2542 aa11.39□□□□□ -0.59
EXTL3-201ENST00000220562 CENPFP49454 3210 aa11.39□□□□□ -0.59
EXTL3-201ENST00000220562 ZFYVE26Q68DK2 2539 aa11.39□□□□□ -0.59
EXTL3-201ENST00000220562 LINC01554Q52M75 96 aa11.38□□□□□ -0.59
EXTL3-201ENST00000220562 SPANXA2-OT1Q8N9U9 137 aa11.37□□□□□ -0.59
EXTL3-201ENST00000220562 ANKRD11Q6UB99 2663 aaPredicted RBP11.37□□□□□ -0.59
EXTL3-201ENST00000220562 ANKRD17O75179 2603 aaKnown RBP11.37□□□□□ -0.59
EXTL3-201ENST00000220562 ZNF462Q96JM2 2506 aa11.35□□□□□ -0.59
EXTL3-201ENST00000220562 KRTAP1-1Q07627 177 aa11.33□□□□□ -0.6
EXTL3-201ENST00000220562 KTN1-AS1Q86SY8 53 aa11.33□□□□□ -0.6
EXTL3-201ENST00000220562 CDC42SE1Q9NRR8 79 aa11.32□□□□□ -0.6
EXTL3-201ENST00000220562 CD164Q04900 197 aa11.26□□□□□ -0.61
EXTL3-201ENST00000220562 LCA10Q71F78 164 aa11.26□□□□□ -0.61
EXTL3-201ENST00000220562 TNP2Q05952 138 aa11.24□□□□□ -0.61
EXTL3-201ENST00000220562 SETD2Q9BYW2 2564 aaPredicted RBP11.24□□□□□ -0.61
EXTL3-201ENST00000220562 CEP295Q9C0D2 2601 aa11.24□□□□□ -0.61
EXTL3-201ENST00000220562 OCR1Q9BZK8 76 aa11.23□□□□□ -0.61
EXTL3-201ENST00000220562 GOLGB1Q14789 3259 aaKnown RBP11.23□□□□□ -0.61
EXTL3-201ENST00000220562 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.21□□□□□ -0.62
EXTL3-201ENST00000220562 USP9YO00507 2555 aaPredicted RBP11.2□□□□□ -0.62
EXTL3-201ENST00000220562 PRR26Q8N8Z3 221 aa11.2□□□□□ -0.62
EXTL3-201ENST00000220562 PKD1L2Q7Z442 2459 aa11.19□□□□□ -0.62
EXTL3-201ENST00000220562 Q6ZSA8 131 aa11.16□□□□□ -0.62
EXTL3-201ENST00000220562 Q1T7F1 81 aa11.15□□□□□ -0.62
EXTL3-201ENST00000220562 POLQO75417 2590 aa11.13□□□□□ -0.63
EXTL3-201ENST00000220562 HRES1P13985 223 aa11.12□□□□□ -0.63
EXTL3-201ENST00000220562 IGLV7-46A0A075B6I9 117 aa11.11□□□□□ -0.63
EXTL3-201ENST00000220562 MTORP42345 2549 aa11.09□□□□□ -0.63
EXTL3-201ENST00000220562 CHD8Q9HCK8 2581 aa11.08□□□□□ -0.64
EXTL3-201ENST00000220562 SPTBN4Q9H254 2564 aa11.07□□□□□ -0.64
EXTL3-201ENST00000220562 ACANP16112 2415 aa11.06□□□□□ -0.64
EXTL3-201ENST00000220562 A0A1B0GU33 70 aa11.05□□□□□ -0.64
EXTL3-201ENST00000220562 Q8NDZ9 215 aa11.03□□□□□ -0.64
EXTL3-201ENST00000220562 MMP24-AS1A0A0U1RRL7 71 aa11.03□□□□□ -0.64
EXTL3-201ENST00000220562 FAM229BQ4G0N7 80 aa11.01□□□□□ -0.65
EXTL3-201ENST00000220562 Q75L30 129 aa11.01□□□□□ -0.65
EXTL3-201ENST00000220562 PLAC8Q9NZF1 115 aa11□□□□□ -0.65
EXTL3-201ENST00000220562 CAMK2N1Q7Z7J9 78 aa10.99□□□□□ -0.65
EXTL3-201ENST00000220562 CR1P17927 2039 aa10.99□□□□□ -0.65
EXTL3-201ENST00000220562 ZCCHC13Q8WW36 166 aaKnown RBP10.99□□□□□ -0.65
EXTL3-201ENST00000220562 LUZP6Q538Z0 58 aa10.98□□□□□ -0.65
EXTL3-201ENST00000220562 Q8N9P0 234 aaPredicted RBP10.97□□□□□ -0.65
EXTL3-201ENST00000220562 S4R3F8 94 aa10.95□□□□□ -0.66
EXTL3-201ENST00000220562 M0R2T5 61 aa10.94□□□□□ -0.66
EXTL3-201ENST00000220562 F8P00451 2351 aa10.93□□□□□ -0.66
EXTL3-201ENST00000220562 SPRR1AP35321 89 aa10.93□□□□□ -0.66
EXTL3-201ENST00000220562 WIPF1O43516 503 aa10.92□□□□□ -0.66
EXTL3-201ENST00000220562 LINC01558Q9Y6Z2 57 aa10.91□□□□□ -0.66
EXTL3-201ENST00000220562 FASNP49327 2511 aaKnown RBP10.91□□□□□ -0.66
EXTL3-201ENST00000220562 LINC00483Q53H64 154 aa10.9□□□□□ -0.67
EXTL3-201ENST00000220562 Q5W150 140 aa10.89□□□□□ -0.67
EXTL3-201ENST00000220562 DNAH12Q6ZR08 3092 aa10.88□□□□□ -0.67
EXTL3-201ENST00000220562 CYSTM1Q9H1C7 97 aa10.87□□□□□ -0.67
EXTL3-201ENST00000220562 Q5XG85 94 aa10.86□□□□□ -0.67
EXTL3-201ENST00000220562 DMAC1Q96GE9 116 aa10.85□□□□□ -0.67
EXTL3-201ENST00000220562 LINC00472Q9H8W2 130 aa10.84□□□□□ -0.67
EXTL3-201ENST00000220562 CSAG1Q6PB30 78 aa10.84□□□□□ -0.67
EXTL3-201ENST00000220562 SPRR1BP22528 89 aa10.81□□□□□ -0.68
EXTL3-201ENST00000220562 FP248Q71RG6 208 aaPredicted RBP10.79□□□□□ -0.68
EXTL3-201ENST00000220562 PRAC1Q96KF2 57 aa10.79□□□□□ -0.68
EXTL3-201ENST00000220562 KRTAP1-5Q9BYS1 174 aa10.78□□□□□ -0.68
EXTL3-201ENST00000220562 Q5VV11 94 aa10.77□□□□□ -0.68
EXTL3-201ENST00000220562 SPINK7P58062 85 aa10.77□□□□□ -0.69
EXTL3-201ENST00000220562 KRTAP26-1Q6PEX3 210 aa10.73□□□□□ -0.69
EXTL3-201ENST00000220562 Q5VSD8 79 aa10.69□□□□□ -0.7
EXTL3-201ENST00000220562 R4GN34 69 aa10.68□□□□□ -0.7
EXTL3-201ENST00000220562 KRTAP10-1P60331 282 aa10.66□□□□□ -0.7
EXTL3-201ENST00000220562 KRTAP10-2P60368 255 aa10.64□□□□□ -0.71
EXTL3-201ENST00000220562 UTRNP46939 3433 aa10.62□□□□□ -0.71
EXTL3-201ENST00000220562 SEC61BP60468 96 aaKnown RBP10.61□□□□□ -0.71
EXTL3-201ENST00000220562 C5orf42Q9H799 3197 aa10.57□□□□□ -0.72
EXTL3-201ENST00000220562 BPTFQ12830 3046 aa10.55□□□□□ -0.72
EXTL3-201ENST00000220562 H1FX-AS1Q4G0G2 97 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms