RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 CEP162Q5TB80 1403 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 WNK1Q9H4A3 2382 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 KIAA0586Q9BVV6 1533 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 KDM5DQ9BY66 1539 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 DUOX2Q9NRD8 1548 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 TARBP1Q13395 1621 aaKnown RBP0.13□□□□□ -2.39
CDKN3-201ENST00000216414 UBR5O95071 2799 aaPredicted RBP0.13□□□□□ -2.39
CDKN3-201ENST00000216414 QSER1Q2KHR3 1735 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 CSPG4Q6UVK1 2322 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 FLNBO75369 2602 aaKnown RBP0.13□□□□□ -2.39
CDKN3-201ENST00000216414 FLNCQ14315 2725 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 SMIM27A0A1W2PRY6 76 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 H0YGX0 51 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 NDUFA3O95167 84 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 IAPPP10997 89 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 DEFB114Q30KQ6 69 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 KRTAP19-3Q7Z4W3 81 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 DEFB106AQ8N104 65 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 C18orf32Q8TCD1 76 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 C6orf48Q9UBA6 75 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 ARHGAP35Q9NRY4 1499 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 PREX1Q8TCU6 1659 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 CHD8Q9HCK8 2581 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 MEGF8Q7Z7M0 2845 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 NCOR1O75376 2440 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 PDE4DIPQ5VU43 2346 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 PCNX1Q96RV3 2341 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 DDX60LQ5H9U9 1706 aaKnown RBP0.13□□□□□ -2.39
CDKN3-201ENST00000216414 ANKRD26Q9UPS8 1709 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 NEXMIFQ5QGS0 1516 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 DCAF1Q9Y4B6 1507 aa0.13□□□□□ -2.39
CDKN3-201ENST00000216414 CNOT1A5YKK6 2376 aaKnown RBP0.12□□□□□ -2.39
CDKN3-201ENST00000216414 SCN7AQ01118 1682 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 TNRC6CQ9HCJ0 1690 aaKnown RBP0.12□□□□□ -2.39
CDKN3-201ENST00000216414 NWD1Q149M9 1564 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 MMP24-AS1A0A0U1RRL7 71 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 A8MTW9 85 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 LYNX1G3V0Z9 82 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 PLNP26678 52 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 PRLHP81277 87 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 DEFB110Q30KQ9 67 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 DEFB121Q5J5C9 76 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 CLPSL2Q6UWE3 100 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 ENHOQ6UWT2 76 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 TENM4Q6N022 2769 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 MAP1BP46821 2468 aaKnown RBP0.12□□□□□ -2.39
CDKN3-201ENST00000216414 DEPDC5O75140 1603 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 COL7A1Q02388 2944 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 MADDQ8WXG6 1647 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 PTPN23Q9H3S7 1636 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 PKD1L1Q8TDX9 2849 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 MAP3K1Q13233 1512 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 EEA1Q15075 1411 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 ACANP16112 2415 aa0.12□□□□□ -2.39
CDKN3-201ENST00000216414 NBEAL1Q6ZS30 2694 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 SETXQ7Z333 2677 aaKnown RBP0.11□□□□□ -2.39
CDKN3-201ENST00000216414 ADAMTS12P58397 1594 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 ARHGEF5Q12774 1597 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 DNMBPQ6XZF7 1577 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 EP300Q09472 2414 aaPredicted RBP0.11□□□□□ -2.39
CDKN3-201ENST00000216414 CREBBPQ92793 2442 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 A0A087WWC5 75 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 M0QY20 66 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 TNP1P09430 55 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 SPART-AS1P0CW21 52 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 SPRR2BP35325 72 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 WT1-ASQ06250 92 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 KCNQ1DNQ9H478 68 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 PIK3C2BO00750 1634 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 NESP48681 1621 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 SCRIBQ14160 1630 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 MROH1Q8NDA8 1641 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 CICQ96RK0 1608 aaPredicted RBP0.11□□□□□ -2.39
CDKN3-201ENST00000216414 LMTK2Q8IWU2 1503 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 ZANQ9Y493 2812 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 ARFGEF2Q9Y6D5 1785 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 ATRQ13535 2644 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 CFAP43Q8NDM7 1665 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 CFAP74Q9C0B2 1584 aa0.11□□□□□ -2.39
CDKN3-201ENST00000216414 DCHS2Q6V1P9 2916 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 STAB2Q8WWQ8 2551 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 ERVK-7P63135 1459 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 ITSN1Q15811 1721 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 NRAPQ86VF7 1730 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 ANKRD17O75179 2603 aaKnown RBP0.1□□□□□ -2.39
CDKN3-201ENST00000216414 SHROOM2Q13796 1616 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 LCE6AA0A183 80 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 SMIM31A0A1B0GVY4 71 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 M0QZ58 72 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 SPRR2DP22532 72 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 KRTAP21-1Q3LI58 79 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 GVINP1Q7Z2Y8 2422 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 SPG11Q96JI7 2443 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 ZNF831Q5JPB2 1677 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.1□□□□□ -2.394e-9■■■■■ 29.4
CDKN3-201ENST00000216414 KNL1Q8NG31 2342 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 HIVEP1P15822 2718 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 UGGT1Q9NYU2 1555 aa0.1□□□□□ -2.39
CDKN3-201ENST00000216414 CEP170BQ9Y4F5 1589 aaPredicted RBP0.1□□□□□ -2.39
CDKN3-201ENST00000216414 LRRIQ1Q96JM4 1722 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms