RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 4930518I15RikQ3V2W7 57 aa6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Rnase12Q5GAM8 145 aa6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Slc25a14Q9Z2B2 325 aa6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Cfap46E9Q2C0 2641 aa6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Ighv13-2A0A0A6YWN3 119 aa6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Ighv8-6A0A0A6YXA3 118 aa6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gm21616B6ZB74 166 aa6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gm10638F6QEG2 257 aa6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Ren1P06281 402 aa6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Snrpd3P62320 126 aaKnown RBP6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Morn4Q6PGF2 146 aa6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gm5447Q8BPB2 115 aa6.87□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Inafm2A0A1L1STD6 152 aa6.86□□□□□ -1.31
Upf3b-201ENSMUST00000076265 NpwA0A1L1STR8 176 aa6.86□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Pitx3O35160 302 aa6.86□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Vamp8O70404 101 aa6.86□□□□□ -1.31
Upf3b-201ENSMUST00000076265 P01636 108 aa6.86□□□□□ -1.31
Upf3b-201ENSMUST00000076265 CtsgP28293 261 aa6.86□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gabarapl2P60521 117 aa6.86□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Lsm3P62311 102 aaKnown RBP6.86□□□□□ -1.31
Upf3b-201ENSMUST00000076265 C1qaP98086 245 aa6.86□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Sdhaf1Q3U276 118 aa6.86□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Scgb2b24Q7M747 112 aa6.86□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gm10283Q8C3L5 117 aa6.86□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Heatr1G3X9B1 2143 aaKnown RBP6.86□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Igkv6-32A0A140T8N9 115 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 P04946 108 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Ap1s3Q7TN05 154 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Nmnat3Q99JR6 245 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 2610042L04RikQ9D073 150 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 4930556J24RikQ9D4U7 146 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Cbln1Q9R171 193 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Zfp407G3UVV3 2246 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 HcrtO55241 130 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Tmem52bQ0VBF2 186 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gm10643Q3URG9 111 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Olfr728Q7TRM6 311 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Olfr1202Q8VF98 309 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Olfr968Q8VFN4 314 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 D730048I06RikQ9CQB8 106 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Pnrc2Q9CR73 140 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Znf706Q9D115 76 aaKnown RBP6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Mrps11Q9DCA2 191 aaKnown RBP6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Hebp2Q9WU63 205 aa6.85□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Olfr1024A2ASU7 327 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 P01674 108 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gabra6P16305 453 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Pla2g2aP31482 146 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 DbiP31786 87 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Srsf12Q8C8K3 266 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Olfr492Q8VFD1 314 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Cox6cQ9CPQ1 76 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Mrps36Q9CQX8 102 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Gm5129F6YHA9 99 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 GzmcP08882 248 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Ly6c1P0CW02 131 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Ly6c2P0CW03 131 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Tmub2Q3V209 319 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Tmem91Q8C581 172 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Vmn1r235Q8R297 328 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Synj2bpQ9D6K5 145 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Znf580Q9DB38 172 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 PigpQ9JHG1 132 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Dopey2Q3UHQ6 2295 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Cabin1G3X8Q1 2187 aaKnown RBP6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Ints1Q6P4S8 2195 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Dock8Q8C147 2100 aa6.84□□□□□ -1.31
Upf3b-201ENSMUST00000076265 Klrd1O54707 179 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gm20767O70517 169 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Tmem254aP0DN89 123 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Tmem254bP0DN90 123 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Tmem254cP0DN91 123 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 PolP10400 120 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 D13Ertd608eQ3UPR8 151 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 A530084C06RikQ3UTW2 186 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Cystm1Q8K353 104 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Olfr1239Q8VGM8 305 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Tm2d1Q99MB3 208 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Zfhx3Q61329 3726 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 AcacaQ5SWU9 2345 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Olfr912A0A1L1SSS5 310 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Defa37K9J724 93 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Cdkn1aP39689 159 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gm10842Q3U587 122 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 TskuQ8CBR6 354 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Olfr510Q8VEW6 314 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Ndufb4Q9CQC7 129 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Atp6v0e1Q9CQD8 81 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 OtorQ9JIE3 128 aa6.83□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Hectd1Q69ZR2 2618 aaKnown RBP6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gm2564F6Z9S8 108 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Hax1O35387 280 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Ccl19O70460 108 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Lcn2P11672 200 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gnb2P62880 340 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Vax1Q2NKI2 338 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gm1968Q3T9I3 115 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 PpdpfQ9CR37 115 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Lypd8Q9D7S0 255 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Olfr972Q9EQA2 314 aa6.82□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms