RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 ZNF22P17026 224 aaPredicted RBP8.23□□□□□ -1.09
LINC00339-211ENST00000641009 PFN2P35080 140 aa8.23□□□□□ -1.09
LINC00339-211ENST00000641009 PMCHL1Q16048 86 aa8.23□□□□□ -1.09
LINC00339-211ENST00000641009 C18orf32Q8TCD1 76 aa8.23□□□□□ -1.09
LINC00339-211ENST00000641009 TSPAN13O95857 204 aa8.22□□□□□ -1.09
LINC00339-211ENST00000641009 LINC00614P0C842 121 aa8.22□□□□□ -1.09
LINC00339-211ENST00000641009 TRAPPC1Q9Y5R8 145 aa8.22□□□□□ -1.09
LINC00339-211ENST00000641009 IGKV2-28A0A075B6P5 120 aa8.21□□□□□ -1.09
LINC00339-211ENST00000641009 IGKV2D-28P01615 120 aa8.21□□□□□ -1.09
LINC00339-211ENST00000641009 HBDP02042 147 aa8.21□□□□□ -1.09
LINC00339-211ENST00000641009 COA6Q5JTJ3 125 aaKnown RBP8.21□□□□□ -1.09
LINC00339-211ENST00000641009 ANAPC11Q9NYG5 84 aa8.21□□□□□ -1.09
LINC00339-211ENST00000641009 MUC2Q02817 5179 aa8.21□□□□□ -1.1
LINC00339-211ENST00000641009 CRYGAP11844 174 aa8.2□□□□□ -1.1
LINC00339-211ENST00000641009 UBE2AP49459 152 aa8.2□□□□□ -1.1
LINC00339-211ENST00000641009 KRTAP13-1Q8IUC0 172 aa8.2□□□□□ -1.1
LINC00339-211ENST00000641009 CTAG1AP78358 180 aa8.19□□□□□ -1.1
LINC00339-211ENST00000641009 HIST3H2BBQ8N257 126 aa8.19□□□□□ -1.1
LINC00339-211ENST00000641009 TYMSOSQ8TAI1 123 aa8.19□□□□□ -1.1
LINC00339-211ENST00000641009 ZNF625Q96I27 306 aaPredicted RBP8.19□□□□□ -1.1
LINC00339-211ENST00000641009 SND1-IT1Q9HBX3 110 aa8.19□□□□□ -1.1
LINC00339-211ENST00000641009 ERG28Q9UKR5 140 aa8.19□□□□□ -1.1
LINC00339-211ENST00000641009 C11orf86A6NJI1 115 aa8.18□□□□□ -1.1
LINC00339-211ENST00000641009 VPREB1P12018 145 aa8.18□□□□□ -1.1
LINC00339-211ENST00000641009 BAGE3Q86Y29 109 aa8.18□□□□□ -1.1
LINC00339-211ENST00000641009 KRTAP13-2Q52LG2 175 aa8.17□□□□□ -1.1
LINC00339-211ENST00000641009 TMEM170BQ5T4T1 132 aa8.17□□□□□ -1.1
LINC00339-211ENST00000641009 Q8NDZ9 215 aa8.17□□□□□ -1.1
LINC00339-211ENST00000641009 PCP4L1A6NKN8 68 aa8.16□□□□□ -1.1
LINC00339-211ENST00000641009 TMEM238C9JI98 176 aa8.16□□□□□ -1.1
LINC00339-211ENST00000641009 S100A2P29034 98 aa8.16□□□□□ -1.1
LINC00339-211ENST00000641009 PRLHP81277 87 aa8.16□□□□□ -1.1
LINC00339-211ENST00000641009 COX17Q14061 63 aa8.16□□□□□ -1.1
LINC00339-211ENST00000641009 PYY3Q5JQD4 70 aa8.15□□□□□ -1.1
LINC00339-211ENST00000641009 TMEM126AQ9H061 195 aa8.15□□□□□ -1.1
LINC00339-211ENST00000641009 RPL24P83731 157 aaKnown RBP8.14□□□□□ -1.11
LINC00339-211ENST00000641009 FAM19A1Q7Z5A9 133 aa8.14□□□□□ -1.11
LINC00339-211ENST00000641009 HIST1H2BLQ99880 126 aa8.13□□□□□ -1.11
LINC00339-211ENST00000641009 CHTOPQ9Y3Y2 248 aaKnown RBP8.13□□□□□ -1.11
LINC00339-211ENST00000641009 M0R378 163 aa8.13□□□□□ -1.11
LINC00339-211ENST00000641009 FAM229BQ4G0N7 80 aa8.13□□□□□ -1.11
LINC00339-211ENST00000641009 SFTA2Q6UW10 78 aa8.12□□□□□ -1.11
LINC00339-211ENST00000641009 A0A0U1RRA0 63 aa8.11□□□□□ -1.11
LINC00339-211ENST00000641009 LINC00158P58513 81 aa8.11□□□□□ -1.11
LINC00339-211ENST00000641009 TMEM223A0PJW6 202 aa8.1□□□□□ -1.11
LINC00339-211ENST00000641009 LINC00587B1AMM8 73 aa8.1□□□□□ -1.11
LINC00339-211ENST00000641009 JOSD1Q15040 202 aaPredicted RBP8.1□□□□□ -1.11
LINC00339-211ENST00000641009 LINC00304Q8N9R0 145 aa8.1□□□□□ -1.11
LINC00339-211ENST00000641009 IFI27L1Q96BM0 104 aa8.1□□□□□ -1.11
LINC00339-211ENST00000641009 RETNLBQ9BQ08 111 aa8.1□□□□□ -1.11
LINC00339-211ENST00000641009 IGKV2D-26A0A0A0MRZ7 120 aa8.09□□□□□ -1.11
LINC00339-211ENST00000641009 FABP4P15090 132 aa8.09□□□□□ -1.11
LINC00339-211ENST00000641009 TRAV12-1A0A0B4J245 112 aa8.08□□□□□ -1.12
LINC00339-211ENST00000641009 CHCHD1Q96BP2 118 aaKnown RBP8.08□□□□□ -1.12
LINC00339-211ENST00000641009 PLEKHB2Q96CS7 222 aa8.08□□□□□ -1.12
LINC00339-211ENST00000641009 C21orf62-AS1Q17RA5 79 aa8.07□□□□□ -1.12
LINC00339-211ENST00000641009 HIGD2AQ9BW72 106 aa8.07□□□□□ -1.12
LINC00339-211ENST00000641009 SMIM13P0DJ93 91 aa8.06□□□□□ -1.12
LINC00339-211ENST00000641009 C3orf22Q8N5N4 141 aa8.06□□□□□ -1.12
LINC00339-211ENST00000641009 FAM19A2Q8N3H0 131 aa8.05□□□□□ -1.12
LINC00339-211ENST00000641009 MEIG1Q5JSS6 88 aa8.04□□□□□ -1.12
LINC00339-211ENST00000641009 BOD1L2Q8IYS8 172 aa8.04□□□□□ -1.12
LINC00339-211ENST00000641009 H0Y8G0 127 aa8.03□□□□□ -1.12
LINC00339-211ENST00000641009 NCR3O14931 201 aa8.03□□□□□ -1.12
LINC00339-211ENST00000641009 HSBP1O75506 76 aa8.03□□□□□ -1.12
LINC00339-211ENST00000641009 MIR7-3HGQ8N6C7 128 aa8.03□□□□□ -1.12
LINC00339-211ENST00000641009 SPRR4Q96PI1 79 aa8.02□□□□□ -1.13
LINC00339-211ENST00000641009 LINC00310P59036 64 aa8.01□□□□□ -1.13
LINC00339-211ENST00000641009 HERV-K104P63124 156 aa8.01□□□□□ -1.13
LINC00339-211ENST00000641009 NDUFA12Q9UI09 145 aa8.01□□□□□ -1.13
LINC00339-211ENST00000641009 PRYO14603 147 aa8□□□□□ -1.13
LINC00339-211ENST00000641009 TSPEAR-AS2P59090 65 aa8□□□□□ -1.13
LINC00339-211ENST00000641009 MUC17Q685J3 4493 aa7.99□□□□□ -1.13
LINC00339-211ENST00000641009 IGLV7-46A0A075B6I9 117 aa7.99□□□□□ -1.13
LINC00339-211ENST00000641009 MYMXA0A1B0GTQ4 84 aa7.99□□□□□ -1.13
LINC00339-211ENST00000641009 TSTD3H0UI37 97 aa7.99□□□□□ -1.13
LINC00339-211ENST00000641009 SPRR1AP35321 89 aa7.99□□□□□ -1.13
LINC00339-211ENST00000641009 LINC00337Q8N6G1 96 aa7.99□□□□□ -1.13
LINC00339-211ENST00000641009 KCNQ1DNQ9H478 68 aa7.99□□□□□ -1.13
LINC00339-211ENST00000641009 TRBV10-3A0A0K0K1G6 114 aa7.98□□□□□ -1.13
LINC00339-211ENST00000641009 KRTAP4-16G5E9R7 235 aaPredicted RBP7.98□□□□□ -1.13
LINC00339-211ENST00000641009 LEPROTL1O95214 131 aa7.98□□□□□ -1.13
LINC00339-211ENST00000641009 DDTP30046 118 aa7.98□□□□□ -1.13
LINC00339-211ENST00000641009 TPRXLQ17RH7 258 aa7.98□□□□□ -1.13
LINC00339-211ENST00000641009 CDIP1Q9H305 208 aa7.98□□□□□ -1.13
LINC00339-211ENST00000641009 ZNF706Q9Y5V0 76 aaPredicted RBP7.98□□□□□ -1.13
LINC00339-211ENST00000641009 A0A0U1RQV1 116 aa7.97□□□□□ -1.13
LINC00339-211ENST00000641009 ETDCA0A1B0GVM5 59 aa7.97□□□□□ -1.13
LINC00339-211ENST00000641009 SERF1AO75920 110 aa7.97□□□□□ -1.13
LINC00339-211ENST00000641009 DAND5Q8N907 189 aa7.97□□□□□ -1.13
LINC00339-211ENST00000641009 SMCR5Q8TEV8 140 aa7.97□□□□□ -1.13
LINC00339-211ENST00000641009 C14orf144Q96I85 54 aa7.97□□□□□ -1.13
LINC00339-211ENST00000641009 LEPROTO15243 131 aa7.96□□□□□ -1.13
LINC00339-211ENST00000641009 MAP1LC3CQ9BXW4 147 aa7.96□□□□□ -1.13
LINC00339-211ENST00000641009 PPDPFQ9H3Y8 114 aa7.96□□□□□ -1.13
LINC00339-211ENST00000641009 SPAG11AQ6PDA7 123 aa7.95□□□□□ -1.14
LINC00339-211ENST00000641009 FAT4Q6V0I7 4981 aa7.95□□□□□ -1.14
LINC00339-211ENST00000641009 PLNP26678 52 aa7.94□□□□□ -1.14
LINC00339-211ENST00000641009 Q8NBF4 154 aa7.94□□□□□ -1.14
LINC00339-211ENST00000641009 PMCHL2Q9BQD1 86 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms