RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 RMI2Q96E14 147 aa7.85□□□□□ -1.15
ERGIC3-220ENST00000640748 NAA38Q9BRA0 125 aaKnown RBP7.85□□□□□ -1.15
ERGIC3-220ENST00000640748 PGPEP1Q9NXJ5 209 aa7.85□□□□□ -1.15
ERGIC3-220ENST00000640748 PRO1854Q9UHT4 67 aa7.85□□□□□ -1.15
ERGIC3-220ENST00000640748 VPS13BQ7Z7G8 4022 aa7.84□□□□□ -1.15
ERGIC3-220ENST00000640748 A0A1W2PPM0 123 aa7.84□□□□□ -1.15
ERGIC3-220ENST00000640748 INAFM2P0DMQ5 153 aa7.84□□□□□ -1.15
ERGIC3-220ENST00000640748 MIR7-3HGQ8N6C7 128 aa7.84□□□□□ -1.15
ERGIC3-220ENST00000640748 Q9HAA7 133 aa7.84□□□□□ -1.15
ERGIC3-220ENST00000640748 FLG2Q5D862 2391 aaPredicted RBP7.83□□□□□ -1.16
ERGIC3-220ENST00000640748 FABP2P12104 132 aa7.83□□□□□ -1.16
ERGIC3-220ENST00000640748 PFN2P35080 140 aa7.83□□□□□ -1.16
ERGIC3-220ENST00000640748 COX17Q14061 63 aa7.83□□□□□ -1.16
ERGIC3-220ENST00000640748 SOSTDC1Q6X4U4 206 aa7.83□□□□□ -1.16
ERGIC3-220ENST00000640748 SRRM2Q9UQ35 2752 aaKnown RBP7.83□□□□□ -1.16
ERGIC3-220ENST00000640748 ZNF561-AS1K7EIQ3 104 aa7.82□□□□□ -1.16
ERGIC3-220ENST00000640748 TSPAN13O95857 204 aa7.82□□□□□ -1.16
ERGIC3-220ENST00000640748 UBE2V1Q13404 147 aa7.82□□□□□ -1.16
ERGIC3-220ENST00000640748 Q5VSD8 79 aa7.82□□□□□ -1.16
ERGIC3-220ENST00000640748 NTN5Q8WTR8 489 aaPredicted RBP7.82□□□□□ -1.16
ERGIC3-220ENST00000640748 A0A087WTM6 91 aa7.81□□□□□ -1.16
ERGIC3-220ENST00000640748 EIF4EBP3O60516 100 aaPredicted RBP7.81□□□□□ -1.16
ERGIC3-220ENST00000640748 GTF2H5Q6ZYL4 71 aa7.81□□□□□ -1.16
ERGIC3-220ENST00000640748 GAGE10A6NGK3 116 aa7.8□□□□□ -1.16
ERGIC3-220ENST00000640748 F8WDY8 70 aa7.8□□□□□ -1.16
ERGIC3-220ENST00000640748 HIGD2BQ4VC39 106 aa7.8□□□□□ -1.16
ERGIC3-220ENST00000640748 LYRM7Q5U5X0 104 aa7.8□□□□□ -1.16
ERGIC3-220ENST00000640748 UNQ6190/PRO20217Q6UXQ8 127 aa7.8□□□□□ -1.16
ERGIC3-220ENST00000640748 C15orf56Q8N910 161 aa7.8□□□□□ -1.16
ERGIC3-220ENST00000640748 LINC00526Q96FQ7 95 aa7.8□□□□□ -1.16
ERGIC3-220ENST00000640748 SPCS1Q9Y6A9 102 aa7.8□□□□□ -1.16
ERGIC3-220ENST00000640748 GVQW2A0A096LPI5 108 aaPredicted RBP7.79□□□□□ -1.16
ERGIC3-220ENST00000640748 K7EP34 96 aa7.79□□□□□ -1.16
ERGIC3-220ENST00000640748 Q1RN00 199 aa7.79□□□□□ -1.16
ERGIC3-220ENST00000640748 C2orf48Q96LS8 159 aa7.79□□□□□ -1.16
ERGIC3-220ENST00000640748 CAMK2N2Q96S95 79 aa7.79□□□□□ -1.16
ERGIC3-220ENST00000640748 SND1-IT1Q9HBX3 110 aa7.79□□□□□ -1.16
ERGIC3-220ENST00000640748 TRBV30A0A0K0K1B3 111 aa7.78□□□□□ -1.16
ERGIC3-220ENST00000640748 C10orf25Q5T742 122 aa7.78□□□□□ -1.16
ERGIC3-220ENST00000640748 LOC107984156A0A0G2JMH3 177 aa7.77□□□□□ -1.17
ERGIC3-220ENST00000640748 H7C2G1 150 aa7.77□□□□□ -1.17
ERGIC3-220ENST00000640748 SMR3BP02814 79 aaPredicted RBP7.77□□□□□ -1.17
ERGIC3-220ENST00000640748 RPL13AP40429 203 aaKnown RBP7.77□□□□□ -1.17
ERGIC3-220ENST00000640748 PSMB2P49721 201 aa7.77□□□□□ -1.17
ERGIC3-220ENST00000640748 HAMPP81172 84 aa7.77□□□□□ -1.17
ERGIC3-220ENST00000640748 C9orf116Q5BN46 136 aaPredicted RBP7.77□□□□□ -1.17
ERGIC3-220ENST00000640748 ARL17AQ8IVW1 177 aa7.77□□□□□ -1.17
ERGIC3-220ENST00000640748 TRAV13-2A0A0B4J235 113 aa7.76□□□□□ -1.17
ERGIC3-220ENST00000640748 C6orf48Q9UBA6 75 aa7.76□□□□□ -1.17
ERGIC3-220ENST00000640748 SCGB1C2P0DMR2 95 aa7.75□□□□□ -1.17
ERGIC3-220ENST00000640748 DNAH8Q96JB1 4490 aa7.74□□□□□ -1.17
ERGIC3-220ENST00000640748 LRCOL1A6NCL2 159 aa7.74□□□□□ -1.17
ERGIC3-220ENST00000640748 USP17L23D6RBM5 183 aa7.74□□□□□ -1.17
ERGIC3-220ENST00000640748 SYCNQ0VAF6 134 aa7.74□□□□□ -1.17
ERGIC3-220ENST00000640748 Q6ZRU5 148 aa7.74□□□□□ -1.17
ERGIC3-220ENST00000640748 NDUFC2O95298 119 aa7.73□□□□□ -1.17
ERGIC3-220ENST00000640748 COX6CP09669 75 aa7.73□□□□□ -1.17
ERGIC3-220ENST00000640748 TRBV20-1A0A075B6N2 111 aa7.72□□□□□ -1.17
ERGIC3-220ENST00000640748 IGKV2-28A0A075B6P5 120 aa7.72□□□□□ -1.17
ERGIC3-220ENST00000640748 IGKV2D-28P01615 120 aa7.72□□□□□ -1.17
ERGIC3-220ENST00000640748 PSCAO43653 123 aa7.71□□□□□ -1.18
ERGIC3-220ENST00000640748 TRIAP1O43715 76 aa7.71□□□□□ -1.18
ERGIC3-220ENST00000640748 RNF151Q2KHN1 245 aa7.71□□□□□ -1.18
ERGIC3-220ENST00000640748 CARD19Q96LW7 228 aa7.71□□□□□ -1.18
ERGIC3-220ENST00000640748 FAM30AQ9NZY2 134 aa7.71□□□□□ -1.18
ERGIC3-220ENST00000640748 IGLV5-52A0A0A0MRZ9 124 aa7.7□□□□□ -1.18
ERGIC3-220ENST00000640748 LINC00337Q8N6G1 96 aa7.7□□□□□ -1.18
ERGIC3-220ENST00000640748 NDUFC2-KCTD14E9PQ53 114 aa7.69□□□□□ -1.18
ERGIC3-220ENST00000640748 H3BMG7 143 aa7.69□□□□□ -1.18
ERGIC3-220ENST00000640748 FAM229AH3BQW9 127 aa7.69□□□□□ -1.18
ERGIC3-220ENST00000640748 TCL1BO95988 128 aa7.69□□□□□ -1.18
ERGIC3-220ENST00000640748 OR13C6PQ8NH95 151 aa7.69□□□□□ -1.18
ERGIC3-220ENST00000640748 HMCN2Q8NDA2 5059 aa7.68□□□□□ -1.18
ERGIC3-220ENST00000640748 ATXN8Q156A1 80 aa7.68□□□□□ -1.18
ERGIC3-220ENST00000640748 C14orf177Q52M58 125 aa7.68□□□□□ -1.18
ERGIC3-220ENST00000640748 Q8N814 137 aa7.68□□□□□ -1.18
ERGIC3-220ENST00000640748 LECT2O14960 151 aa7.67□□□□□ -1.18
ERGIC3-220ENST00000640748 TLX1NBP0CAT3 122 aa7.67□□□□□ -1.18
ERGIC3-220ENST00000640748 RPL28P46779 137 aaKnown RBP7.67□□□□□ -1.18
ERGIC3-220ENST00000640748 TRBV10-2A0A0K0K1G8 114 aa7.66□□□□□ -1.18
ERGIC3-220ENST00000640748 F8W1H4 67 aa7.66□□□□□ -1.18
ERGIC3-220ENST00000640748 NCR3O14931 201 aa7.66□□□□□ -1.18
ERGIC3-220ENST00000640748 WFDC2Q14508 124 aa7.66□□□□□ -1.18
ERGIC3-220ENST00000640748 Q6ZSA8 131 aa7.66□□□□□ -1.18
ERGIC3-220ENST00000640748 TMEM126AQ9H061 195 aa7.66□□□□□ -1.18
ERGIC3-220ENST00000640748 SLPIP03973 132 aa7.65□□□□□ -1.18
ERGIC3-220ENST00000640748 PRR3P79522 188 aaKnown RBP7.65□□□□□ -1.18
ERGIC3-220ENST00000640748 LRP1Q07954 4544 aaKnown RBP7.65□□□□□ -1.18
ERGIC3-220ENST00000640748 S100A7L2Q5SY68 101 aa7.65□□□□□ -1.18
ERGIC3-220ENST00000640748 SMIM11BQ8TCY0 68 aa7.65□□□□□ -1.18
ERGIC3-220ENST00000640748 XAGE1AQ9HD64 81 aa7.65□□□□□ -1.18
ERGIC3-220ENST00000640748 J3QL48 77 aa7.64□□□□□ -1.19
ERGIC3-220ENST00000640748 RPL18AQ02543 176 aaKnown RBP7.64□□□□□ -1.19
ERGIC3-220ENST00000640748 GAGE2EQ4V326 116 aa7.64□□□□□ -1.19
ERGIC3-220ENST00000640748 Q6ZRP5 223 aa7.64□□□□□ -1.19
ERGIC3-220ENST00000640748 Q8NDZ9 215 aa7.64□□□□□ -1.19
ERGIC3-220ENST00000640748 GAGE2DQ9UEU5 116 aa7.64□□□□□ -1.19
ERGIC3-220ENST00000640748 LOC107984640A0A0U1RRK4 108 aa7.63□□□□□ -1.19
ERGIC3-220ENST00000640748 KRTAP29-1A8MX34 341 aaPredicted RBP7.63□□□□□ -1.19
ERGIC3-220ENST00000640748 LST1O00453 97 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms