RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 MAP3K4Q9Y6R4 1608 aa-0.6□□□□□ -2.51
AP3S1-209ENST00000640413 A0A0G2JMZ2 1700 aa-0.61□□□□□ -2.51
AP3S1-209ENST00000640413 DOT1LQ8TEK3 1739 aa-0.61□□□□□ -2.51
AP3S1-209ENST00000640413 UGGT1Q9NYU2 1555 aa-0.61□□□□□ -2.51
AP3S1-209ENST00000640413 NCOA3Q9Y6Q9 1424 aa-0.61□□□□□ -2.51
AP3S1-209ENST00000640413 CKS1BP61024 79 aa-0.61□□□□□ -2.51
AP3S1-209ENST00000640413 CCL8P80075 99 aa-0.61□□□□□ -2.51
AP3S1-209ENST00000640413 SCIMPQ6UWF3 145 aa-0.61□□□□□ -2.51
AP3S1-209ENST00000640413 DPH3P1Q9H4G8 78 aa-0.61□□□□□ -2.51
AP3S1-209ENST00000640413 ZFYVE16Q7Z3T8 1539 aa-0.61□□□□□ -2.51
AP3S1-209ENST00000640413 NRXN3Q9Y4C0 1643 aa-0.61□□□□□ -2.51
AP3S1-209ENST00000640413 GAPVD1Q14C86 1478 aa-0.61□□□□□ -2.51
AP3S1-209ENST00000640413 NRKQ7Z2Y5 1582 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 CROCC2H7BZ55 1655 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 ITSN2Q9NZM3 1697 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 PRG4Q92954 1404 aaPredicted RBP-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 NSD3Q9BZ95 1437 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 DUOX2Q9NRD8 1548 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 PITX3O75364 302 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 IFNGP01579 166 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 TSPAN19P0C672 248 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 LINC01600Q96MT4 127 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 AQP10Q96PS8 301 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 CEP152O94986 1710 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 ABCA3Q99758 1704 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 MRC1P22897 1456 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 PXDNQ92626 1479 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 MYH6P13533 1939 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 ROBO1Q9Y6N7 1651 aa-0.62□□□□□ -2.51
AP3S1-209ENST00000640413 LRRC7Q96NW7 1537 aa-0.63□□□□□ -2.51
AP3S1-209ENST00000640413 TARBP1Q13395 1621 aaKnown RBP-0.63□□□□□ -2.51
AP3S1-209ENST00000640413 SCRIBQ14160 1630 aa-0.63□□□□□ -2.51
AP3S1-209ENST00000640413 CC2D2AQ9P2K1 1620 aa-0.63□□□□□ -2.51
AP3S1-209ENST00000640413 LRRC37AA6NMS7 1700 aa-0.63□□□□□ -2.51
AP3S1-209ENST00000640413 M0R135 149 aa-0.63□□□□□ -2.51
AP3S1-209ENST00000640413 COX8AP10176 69 aa-0.63□□□□□ -2.51
AP3S1-209ENST00000640413 COX17Q14061 63 aa-0.63□□□□□ -2.51
AP3S1-209ENST00000640413 Q6JHZ5 121 aa-0.63□□□□□ -2.51
AP3S1-209ENST00000640413 KCNRGQ8N5I3 272 aa-0.63□□□□□ -2.51
AP3S1-209ENST00000640413 TSTD1Q8NFU3 115 aa-0.63□□□□□ -2.51
AP3S1-209ENST00000640413 NCOA2Q15596 1464 aa-0.63□□□□□ -2.51
AP3S1-209ENST00000640413 TIAM1Q13009 1591 aa-0.63□□□□□ -2.51
AP3S1-209ENST00000640413 A0A1B0GUL6 1792 aa-0.63□□□□□ -2.51
AP3S1-209ENST00000640413 LTN1O94822 1766 aa-0.63□□□□□ -2.51
AP3S1-209ENST00000640413 FHAD1B1AJZ9 1412 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 SHROOM2Q13796 1616 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 MON2Q7Z3U7 1717 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 LRRIQ1Q96JM4 1722 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 SPEF2Q9C093 1822 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 KIF21AQ7Z4S6 1674 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 DIP2AQ14689 1571 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 ZNF518AQ6AHZ1 1483 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 NRXN1Q9ULB1 1477 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 C20orf202A1L168 122 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 SYS1-DBNDD2H3BUS1 97 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 GUCA1AP43080 201 aaPredicted RBP-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 WFDC9Q8NEX5 89 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 PYDC1Q8WXC3 89 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 USMG5Q96IX5 58 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 TTTY10Q9BZA0 68 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 TPT1P8Q9HAU6 139 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 S4R3F8 94 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 V9GYH0 126 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 UBR1Q8IWV7 1749 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 NALCNQ8IZF0 1738 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 XRN1Q8IZH2 1706 aaKnown RBP-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 DEPDC5O75140 1603 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 KIF14Q15058 1648 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 NEXMIFQ5QGS0 1516 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 MAGI3Q5TCQ9 1506 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 MYOM3Q5VTT5 1437 aa-0.64□□□□□ -2.51
AP3S1-209ENST00000640413 SHPRHQ149N8 1683 aa-0.65□□□□□ -2.51
AP3S1-209ENST00000640413 DNMBPQ6XZF7 1577 aa-0.65□□□□□ -2.51
AP3S1-209ENST00000640413 POLA1P09884 1462 aaPredicted RBP-0.65□□□□□ -2.51
AP3S1-209ENST00000640413 IFT140Q96RY7 1462 aa-0.65□□□□□ -2.51
AP3S1-209ENST00000640413 PATJQ8NI35 1801 aa-0.65□□□□□ -2.51
AP3S1-209ENST00000640413 PIGBOS1A0A0B4J2F0 54 aa-0.65□□□□□ -2.51
AP3S1-209ENST00000640413 LINC00959A0A1B0GUT2 108 aa-0.65□□□□□ -2.51
AP3S1-209ENST00000640413 H0YGG7 62 aa-0.65□□□□□ -2.51
AP3S1-209ENST00000640413 C10orf128Q5T292 105 aa-0.65□□□□□ -2.51
AP3S1-209ENST00000640413 TMEM170BQ5T4T1 132 aa-0.65□□□□□ -2.51
AP3S1-209ENST00000640413 C9orf62Q8N4C0 152 aa-0.65□□□□□ -2.51
AP3S1-209ENST00000640413 RGPD1P0DJD0 1748 aa-0.65□□□□□ -2.51
AP3S1-209ENST00000640413 PIK3C2BO00750 1634 aa-0.65□□□□□ -2.51
AP3S1-209ENST00000640413 EFCAB6Q5THR3 1501 aa-0.65□□□□□ -2.51
AP3S1-209ENST00000640413 PDCD11Q14690 1871 aaKnown RBP-0.65□□□□□ -2.51
AP3S1-209ENST00000640413 PLEKHH2Q8IVE3 1493 aa-0.66□□□□□ -2.51
AP3S1-209ENST00000640413 SUPT6HQ7KZ85 1726 aaKnown RBP-0.66□□□□□ -2.51
AP3S1-209ENST00000640413 ANKRD30AQ9BXX3 1397 aa-0.66□□□□□ -2.51
AP3S1-209ENST00000640413 TRAV13-2A0A0B4J235 113 aa-0.66□□□□□ -2.52
AP3S1-209ENST00000640413 TRBV7-4A0A0J9YYF1 115 aa-0.66□□□□□ -2.52
AP3S1-209ENST00000640413 HCG22E2RYF7 251 aa-0.66□□□□□ -2.52
AP3S1-209ENST00000640413 SIX6O95475 246 aa-0.66□□□□□ -2.52
AP3S1-209ENST00000640413 APOC3P02656 99 aa-0.66□□□□□ -2.52
AP3S1-209ENST00000640413 B2MP61769 119 aa-0.66□□□□□ -2.52
AP3S1-209ENST00000640413 PRO3102Q9H379 93 aa-0.66□□□□□ -2.52
AP3S1-209ENST00000640413 COPZ2Q9P299 210 aa-0.66□□□□□ -2.52
AP3S1-209ENST00000640413 APLNQ9ULZ1 77 aa-0.66□□□□□ -2.52
AP3S1-209ENST00000640413 TRPM2O94759 1503 aa-0.66□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms