RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-256	ENST00000639394	GYPE	P15421	78 aa		7.35	□□□□□ -1.23
PAX6-256	ENST00000639394	IGLV4-60	A0A075B6I1	120 aa		7.35	□□□□□ -1.23
PAX6-256	ENST00000639394		F8W735	103 aa	Predicted RBP	7.35	□□□□□ -1.23
PAX6-256	ENST00000639394	IGLV1-47	P01700	117 aa		7.35	□□□□□ -1.23
PAX6-256	ENST00000639394	APELA	P0DMC3	54 aa		7.35	□□□□□ -1.23
PAX6-256	ENST00000639394	WFDC10A	Q9H1F0	79 aa		7.35	□□□□□ -1.23
PAX6-256	ENST00000639394	ZNF702P	Q9H963	129 aa		7.35	□□□□□ -1.23
PAX6-256	ENST00000639394	CRYBG3	Q68DQ2	2970 aa		7.35	□□□□□ -1.23
PAX6-256	ENST00000639394	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	7.34	□□□□□ -1.23
PAX6-256	ENST00000639394		A0A096LNT2	108 aa		7.34	□□□□□ -1.23
PAX6-256	ENST00000639394	CNBP	P62633	177 aa	Known RBP	7.34	□□□□□ -1.23
PAX6-256	ENST00000639394	PRB3	Q04118	309 aa	Predicted RBP	7.34	□□□□□ -1.23
PAX6-256	ENST00000639394	LINC00242	Q5T6M2	205 aa		7.34	□□□□□ -1.23
PAX6-256	ENST00000639394	COX7B2	Q8TF08	81 aa		7.34	□□□□□ -1.23
PAX6-256	ENST00000639394	DEFB104A	Q8WTQ1	72 aa		7.34	□□□□□ -1.23
PAX6-256	ENST00000639394	CHCHD7	Q9BUK0	85 aa		7.34	□□□□□ -1.23
PAX6-256	ENST00000639394	HELZ2	Q9BYK8	2649 aa	Known RBP	7.33	□□□□□ -1.24
PAX6-256	ENST00000639394	COX7B	P24311	80 aa		7.33	□□□□□ -1.24
PAX6-256	ENST00000639394	LINC00158	P58513	81 aa		7.33	□□□□□ -1.24
PAX6-256	ENST00000639394	LINC00575	Q6W349	94 aa		7.33	□□□□□ -1.24
PAX6-256	ENST00000639394	IGHV7-81	A0A0B4J1V7	117 aa		7.33	□□□□□ -1.24
PAX6-256	ENST00000639394	COX7A1	P24310	79 aa		7.33	□□□□□ -1.24
PAX6-256	ENST00000639394	NAV3	Q8IVL0	2385 aa		7.33	□□□□□ -1.24
PAX6-256	ENST00000639394	SPG11	Q96JI7	2443 aa		7.32	□□□□□ -1.24
PAX6-256	ENST00000639394		B4DSR2	109 aa		7.32	□□□□□ -1.24
PAX6-256	ENST00000639394		M0R2N4	97 aa		7.32	□□□□□ -1.24
PAX6-256	ENST00000639394	KRTAP1-3	Q8IUG1	177 aa		7.32	□□□□□ -1.24
PAX6-256	ENST00000639394	LINC01006	Q8NI28	216 aa		7.32	□□□□□ -1.24
PAX6-256	ENST00000639394	CELSR2	Q9HCU4	2923 aa		7.32	□□□□□ -1.24
PAX6-256	ENST00000639394	ODF3B	A8MYP8	253 aa		7.31	□□□□□ -1.24
PAX6-256	ENST00000639394	PTPN13	Q12923	2485 aa		7.31	□□□□□ -1.24
PAX6-256	ENST00000639394	RNASE1	P07998	156 aa	Known RBP	7.31	□□□□□ -1.24
PAX6-256	ENST00000639394	COX6A2	Q02221	97 aa		7.31	□□□□□ -1.24
PAX6-256	ENST00000639394	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	7.31	□□□□□ -1.24
PAX6-256	ENST00000639394	TACC2	O95359	2948 aa		7.3	□□□□□ -1.24
PAX6-256	ENST00000639394	MSMB	P08118	114 aa		7.3	□□□□□ -1.24
PAX6-256	ENST00000639394	KCNQ1DN	Q9H478	68 aa		7.3	□□□□□ -1.24
PAX6-256	ENST00000639394	RTL8C	O15255	209 aa		7.29	□□□□□ -1.24
PAX6-256	ENST00000639394	SMIM29	Q86T20	159 aa		7.29	□□□□□ -1.24
PAX6-256	ENST00000639394	XAGE1A	Q9HD64	81 aa		7.29	□□□□□ -1.24
PAX6-256	ENST00000639394	DPM3	Q9P2X0	92 aa		7.29	□□□□□ -1.24
PAX6-256	ENST00000639394	ZFHX3	Q15911	3703 aa		7.29	□□□□□ -1.24
PAX6-256	ENST00000639394	NBPF19	A0A087WUL8	3843 aa		7.29	□□□□□ -1.24
PAX6-256	ENST00000639394	CSMD2	Q7Z408	3487 aa		7.29	□□□□□ -1.24
PAX6-256	ENST00000639394	ABCA2	Q9BZC7	2435 aa		7.29	□□□□□ -1.24
PAX6-256	ENST00000639394	ATP6V0E1	O15342	81 aa		7.28	□□□□□ -1.24
PAX6-256	ENST00000639394	MINOS1	Q5TGZ0	78 aa		7.28	□□□□□ -1.24
PAX6-256	ENST00000639394	MINOS1-NBL1	R4GNA1	71 aa		7.28	□□□□□ -1.24
PAX6-256	ENST00000639394	IGHV3OR16-12	A0A075B7B8	117 aa		7.28	□□□□□ -1.24
PAX6-256	ENST00000639394	APC	P25054	2843 aa		7.28	□□□□□ -1.24
PAX6-256	ENST00000639394	VPS13C	Q709C8	3753 aa		7.27	□□□□□ -1.25
PAX6-256	ENST00000639394	ANKRD17	O75179	2603 aa	Known RBP	7.27	□□□□□ -1.25
PAX6-256	ENST00000639394	GCN1	Q92616	2671 aa	Known RBP	7.27	□□□□□ -1.25
PAX6-256	ENST00000639394	MED13L	Q71F56	2210 aa		7.27	□□□□□ -1.25
PAX6-256	ENST00000639394	SPAG11B	Q08648	103 aa		7.27	□□□□□ -1.25
PAX6-256	ENST00000639394	KLK9	Q2XQG4	91 aa		7.27	□□□□□ -1.25
PAX6-256	ENST00000639394		Q8NAQ8	132 aa		7.27	□□□□□ -1.25
PAX6-256	ENST00000639394	MAPK1IP1L	Q8NDC0	245 aa		7.27	□□□□□ -1.25
PAX6-256	ENST00000639394	POLQ	O75417	2590 aa		7.27	□□□□□ -1.25
PAX6-256	ENST00000639394	IGHV3-72	A0A0B4J1Y9	119 aa		7.26	□□□□□ -1.25
PAX6-256	ENST00000639394	C1orf134	Q5TEV5	83 aa		7.26	□□□□□ -1.25
PAX6-256	ENST00000639394	LINC00467	Q9BRT7	94 aa		7.26	□□□□□ -1.25
PAX6-256	ENST00000639394	ASH1L	Q9NR48	2969 aa	Known RBP	7.26	□□□□□ -1.25
PAX6-256	ENST00000639394	ABCA12	Q86UK0	2595 aa		7.26	□□□□□ -1.25
PAX6-256	ENST00000639394	NAV2	Q8IVL1	2488 aa		7.26	□□□□□ -1.25
PAX6-256	ENST00000639394	IGHV4-59	P01825	116 aa		7.26	□□□□□ -1.25
PAX6-256	ENST00000639394	PRR4	Q16378	134 aa		7.26	□□□□□ -1.25
PAX6-256	ENST00000639394	CENPE	Q02224	2701 aa		7.26	□□□□□ -1.25
PAX6-256	ENST00000639394	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	7.25	□□□□□ -1.25
PAX6-256	ENST00000639394	CR1	P17927	2039 aa		7.25	□□□□□ -1.25
PAX6-256	ENST00000639394	IGHV3-66	A0A0C4DH42	116 aa		7.24	□□□□□ -1.25
PAX6-256	ENST00000639394	LINC00612	Q8N6U2	182 aa		7.24	□□□□□ -1.25
PAX6-256	ENST00000639394	NPB	Q8NG41	125 aa		7.24	□□□□□ -1.25
PAX6-256	ENST00000639394	WNK2	Q9Y3S1	2297 aa		7.24	□□□□□ -1.25
PAX6-256	ENST00000639394	PDZD2	O15018	2839 aa		7.23	□□□□□ -1.25
PAX6-256	ENST00000639394	HIGD2B	Q4VC39	106 aa		7.23	□□□□□ -1.25
PAX6-256	ENST00000639394	IGHV3OR16-8	A0A075B7F1	116 aa		7.22	□□□□□ -1.25
PAX6-256	ENST00000639394	IGHV3-35	A0A0C4DH35	117 aa		7.22	□□□□□ -1.25
PAX6-256	ENST00000639394		A0A1W2PNM2	257 aa		7.22	□□□□□ -1.25
PAX6-256	ENST00000639394	ROMO1	P60602	79 aa		7.22	□□□□□ -1.25
PAX6-256	ENST00000639394	BRD3OS	Q6XYD6	125 aa		7.22	□□□□□ -1.25
PAX6-256	ENST00000639394	COA5	Q86WW8	74 aa		7.22	□□□□□ -1.25
PAX6-256	ENST00000639394	FASN	P49327	2511 aa	Known RBP	7.22	□□□□□ -1.25
PAX6-256	ENST00000639394	IGHV3-23	P01764	117 aa		7.22	□□□□□ -1.25
PAX6-256	ENST00000639394	ADM2	Q7Z4H4	148 aa		7.22	□□□□□ -1.25
PAX6-256	ENST00000639394		Q8N9L7	120 aa		7.22	□□□□□ -1.25
PAX6-256	ENST00000639394	MUC4	Q99102	2169 aa		7.22	□□□□□ -1.25
PAX6-256	ENST00000639394	UNC79	Q9P2D8	2635 aa		7.21	□□□□□ -1.25
PAX6-256	ENST00000639394	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	7.21	□□□□□ -1.26
PAX6-256	ENST00000639394	SPINK7	P58062	85 aa		7.21	□□□□□ -1.26
PAX6-256	ENST00000639394	SPAG11A	Q6PDA7	123 aa		7.21	□□□□□ -1.26
PAX6-256	ENST00000639394	IGHV3OR16-13	A0A075B7E8	117 aa		7.2	□□□□□ -1.26
PAX6-256	ENST00000639394	LCE2D	Q5TA82	110 aa	Predicted RBP	7.2	□□□□□ -1.26
PAX6-256	ENST00000639394	CSMD1	Q96PZ7	3565 aa		7.19	□□□□□ -1.26
PAX6-256	ENST00000639394		H0Y9P7	68 aa		7.19	□□□□□ -1.26
PAX6-256	ENST00000639394	KRTAP1-1	Q07627	177 aa		7.19	□□□□□ -1.26
PAX6-256	ENST00000639394	ODF3L2	Q3SX64	289 aa		7.18	□□□□□ -1.26
PAX6-256	ENST00000639394	HECTD1	Q9ULT8	2610 aa		7.17	□□□□□ -1.26
PAX6-256	ENST00000639394	AKAP9	Q99996	3911 aa		7.17	□□□□□ -1.26
PAX6-256	ENST00000639394	C10orf25	Q5T742	122 aa		7.17	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms