RNA–Protein interactions for RNA: ENST00000636507.1

CACNB4-227, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 4,688 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-227ENST00000636507 PRRC2AP48634 2157 aaKnown RBP3.47□□□□□ -1.85
CACNB4-227ENST00000636507 IGLV7-46A0A075B6I9 117 aa3.47□□□□□ -1.85
CACNB4-227ENST00000636507 SPRR1BP22528 89 aa3.47□□□□□ -1.85
CACNB4-227ENST00000636507 NACAE9PAV3 2078 aa3.47□□□□□ -1.85
CACNB4-227ENST00000636507 A8MWP4 228 aa3.47□□□□□ -1.85
CACNB4-227ENST00000636507 ZGRF1Q86YA3 2104 aa3.47□□□□□ -1.85
CACNB4-227ENST00000636507 H0Y9P7 68 aa3.46□□□□□ -1.85
CACNB4-227ENST00000636507 RETNLBQ9BQ08 111 aa3.46□□□□□ -1.85
CACNB4-227ENST00000636507 SPRR1AP35321 89 aa3.46□□□□□ -1.86
CACNB4-227ENST00000636507 A6NED7 52 aa3.46□□□□□ -1.86
CACNB4-227ENST00000636507 MPLKIPQ8TAP9 179 aa3.46□□□□□ -1.86
CACNB4-227ENST00000636507 OXTP01178 125 aa3.46□□□□□ -1.86
CACNB4-227ENST00000636507 C1orf64Q8NEQ6 169 aa3.45□□□□□ -1.86
CACNB4-227ENST00000636507 REG3GQ6UW15 175 aa3.45□□□□□ -1.86
CACNB4-227ENST00000636507 UBE2DNLQ8IWF7 75 aa3.45□□□□□ -1.86
CACNB4-227ENST00000636507 BAHCC1Q9P281 2608 aa3.45□□□□□ -1.86
CACNB4-227ENST00000636507 IGLV10-54A0A075B6I4 117 aa3.44□□□□□ -1.86
CACNB4-227ENST00000636507 ACYP2P14621 99 aa3.44□□□□□ -1.86
CACNB4-227ENST00000636507 PRB3Q04118 309 aaPredicted RBP3.44□□□□□ -1.86
CACNB4-227ENST00000636507 CDSNQ15517 529 aa3.44□□□□□ -1.86
CACNB4-227ENST00000636507 SMIM29Q86T20 159 aa3.44□□□□□ -1.86
CACNB4-227ENST00000636507 BRCA2P51587 3418 aa3.44□□□□□ -1.86
CACNB4-227ENST00000636507 SPG11Q96JI7 2443 aa3.44□□□□□ -1.86
CACNB4-227ENST00000636507 Q8N9L7 120 aa3.44□□□□□ -1.86
CACNB4-227ENST00000636507 TNP2Q05952 138 aa3.43□□□□□ -1.86
CACNB4-227ENST00000636507 C6orf48Q9UBA6 75 aa3.43□□□□□ -1.86
CACNB4-227ENST00000636507 SORL1Q92673 2214 aa3.43□□□□□ -1.86
CACNB4-227ENST00000636507 BPTFQ12830 3046 aa3.43□□□□□ -1.86
CACNB4-227ENST00000636507 A0A096LNT2 108 aa3.43□□□□□ -1.86
CACNB4-227ENST00000636507 DEFB130BP0DP73 79 aa3.43□□□□□ -1.86
CACNB4-227ENST00000636507 DEFB130AP0DP74 79 aa3.43□□□□□ -1.86
CACNB4-227ENST00000636507 PRUNE2Q8WUY3 3088 aa3.43□□□□□ -1.86
CACNB4-227ENST00000636507 DNAJC9-AS1A6NH13 148 aa3.43□□□□□ -1.86
CACNB4-227ENST00000636507 CCDC168Q8NDH2 2452 aa3.43□□□□□ -1.86
CACNB4-227ENST00000636507 DEFB1P60022 68 aa3.42□□□□□ -1.86
CACNB4-227ENST00000636507 C9orf116Q5BN46 136 aaPredicted RBP3.42□□□□□ -1.86
CACNB4-227ENST00000636507 TLN1Q9Y490 2541 aaKnown RBP3.42□□□□□ -1.86
CACNB4-227ENST00000636507 ABCA12Q86UK0 2595 aa3.42□□□□□ -1.86
CACNB4-227ENST00000636507 CHD6Q8TD26 2715 aa3.42□□□□□ -1.86
CACNB4-227ENST00000636507 SZT2Q5T011 3432 aa3.42□□□□□ -1.86
CACNB4-227ENST00000636507 IGLV1-50A0A075B6I6 118 aa3.42□□□□□ -1.86
CACNB4-227ENST00000636507 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.41□□□□□ -1.86
CACNB4-227ENST00000636507 UNQ6190/PRO20217Q6UXQ8 127 aa3.41□□□□□ -1.86
CACNB4-227ENST00000636507 DEFB104AQ8WTQ1 72 aa3.41□□□□□ -1.86
CACNB4-227ENST00000636507 MUC4Q99102 2169 aa3.41□□□□□ -1.86
CACNB4-227ENST00000636507 GRNP28799 593 aaKnown RBP3.41□□□□□ -1.86
CACNB4-227ENST00000636507 LRRK2Q5S007 2527 aa3.41□□□□□ -1.86
CACNB4-227ENST00000636507 DNAH10OSP0CZ25 163 aa3.41□□□□□ -1.86
CACNB4-227ENST00000636507 COL6A3P12111 3177 aa3.41□□□□□ -1.86
CACNB4-227ENST00000636507 C3orf84H3BNL1 204 aa3.41□□□□□ -1.86
CACNB4-227ENST00000636507 LINC01006Q8NI28 216 aa3.41□□□□□ -1.86
CACNB4-227ENST00000636507 DNAH12Q6ZR08 3092 aa3.41□□□□□ -1.86
CACNB4-227ENST00000636507 IGKV2D-24A0A075B6R9 120 aa3.4□□□□□ -1.86
CACNB4-227ENST00000636507 C19orf73Q9NVV2 129 aa3.4□□□□□ -1.86
CACNB4-227ENST00000636507 X6R8D5 127 aa3.4□□□□□ -1.86
CACNB4-227ENST00000636507 USP9XQ93008 2570 aaPredicted RBP3.4□□□□□ -1.86
CACNB4-227ENST00000636507 PRB4P10163 310 aaPredicted RBP3.4□□□□□ -1.87
CACNB4-227ENST00000636507 Q8N9P0 234 aaPredicted RBP3.4□□□□□ -1.87
CACNB4-227ENST00000636507 CNBPP62633 177 aaKnown RBP3.4□□□□□ -1.87
CACNB4-227ENST00000636507 BBC3Q96PG8 261 aaPredicted RBP3.4□□□□□ -1.87
CACNB4-227ENST00000636507 KLK12Q9UKR0 248 aa3.4□□□□□ -1.87
CACNB4-227ENST00000636507 ZNF292O60281 2723 aa3.4□□□□□ -1.87
CACNB4-227ENST00000636507 A8MUN3 132 aa3.4□□□□□ -1.87
CACNB4-227ENST00000636507 K7ERS5 55 aa3.4□□□□□ -1.87
CACNB4-227ENST00000636507 TRANK1O15050 2925 aa3.39□□□□□ -1.87
CACNB4-227ENST00000636507 COA5Q86WW8 74 aa3.39□□□□□ -1.87
CACNB4-227ENST00000636507 Q6ZR54 194 aa3.39□□□□□ -1.87
CACNB4-227ENST00000636507 C7orf33Q8WU49 177 aa3.39□□□□□ -1.87
CACNB4-227ENST00000636507 C15orf56Q8N910 161 aa3.39□□□□□ -1.87
CACNB4-227ENST00000636507 Q8NAQ8 132 aa3.39□□□□□ -1.87
CACNB4-227ENST00000636507 F8P00451 2351 aa3.39□□□□□ -1.87
CACNB4-227ENST00000636507 PIEZO2Q9H5I5 2752 aa3.39□□□□□ -1.87
CACNB4-227ENST00000636507 Q8N377 158 aa3.38□□□□□ -1.87
CACNB4-227ENST00000636507 POLQO75417 2590 aa3.38□□□□□ -1.87
CACNB4-227ENST00000636507 CHD7Q9P2D1 2997 aa3.38□□□□□ -1.87
CACNB4-227ENST00000636507 HELZ2Q9BYK8 2649 aaKnown RBP3.38□□□□□ -1.87
CACNB4-227ENST00000636507 HECTD1Q9ULT8 2610 aa3.38□□□□□ -1.87
CACNB4-227ENST00000636507 Q5VV11 94 aa3.38□□□□□ -1.87
CACNB4-227ENST00000636507 C9orf163Q8N9P6 203 aa3.38□□□□□ -1.87
CACNB4-227ENST00000636507 CSPG4Q6UVK1 2322 aa3.38□□□□□ -1.87
CACNB4-227ENST00000636507 CHD9Q3L8U1 2897 aa3.38□□□□□ -1.87
CACNB4-227ENST00000636507 USP24Q9UPU5 2620 aa3.38□□□□□ -1.87
CACNB4-227ENST00000636507 CYSTM1Q9H1C7 97 aa3.38□□□□□ -1.87
CACNB4-227ENST00000636507 GIG44P09565 113 aaPredicted RBP3.37□□□□□ -1.87
CACNB4-227ENST00000636507 C9orf129Q5T035 196 aaKnown RBP3.37□□□□□ -1.87
CACNB4-227ENST00000636507 NOTCH2NLQ7Z3S9 236 aa3.37□□□□□ -1.87
CACNB4-227ENST00000636507 C16orf90A8MZG2 172 aa3.37□□□□□ -1.87
CACNB4-227ENST00000636507 LINC00476Q8WZB0 136 aa3.37□□□□□ -1.87
CACNB4-227ENST00000636507 RETNQ9HD89 108 aa3.37□□□□□ -1.87
CACNB4-227ENST00000636507 WDR87Q6ZQQ6 2873 aa3.36□□□□□ -1.87
CACNB4-227ENST00000636507 MAST4O15021 2626 aa3.36□□□□□ -1.87
CACNB4-227ENST00000636507 A0A096LPF7 62 aa3.36□□□□□ -1.87
CACNB4-227ENST00000636507 DSCR10P59022 87 aa3.36□□□□□ -1.87
CACNB4-227ENST00000636507 C2CD3Q4AC94 2353 aa3.36□□□□□ -1.87
CACNB4-227ENST00000636507 A6NN06 94 aa3.36□□□□□ -1.87
CACNB4-227ENST00000636507 KRTAP29-1A8MX34 341 aaPredicted RBP3.36□□□□□ -1.87
CACNB4-227ENST00000636507 FAM229AH3BQW9 127 aa3.36□□□□□ -1.87
CACNB4-227ENST00000636507 PLA2G1BP04054 148 aaKnown RBP3.36□□□□□ -1.87
CACNB4-227ENST00000636507 PRR26Q8N8Z3 221 aa3.36□□□□□ -1.87
CACNB4-227ENST00000636507 LAMA2P24043 3122 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms