RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 ATXN8Q156A1 80 aa4.88□□□□□ -1.63
BRCA1-230ENST00000634433 KPRPQ5T749 579 aaPredicted RBP4.88□□□□□ -1.63
BRCA1-230ENST00000634433 LINC00337Q8N6G1 96 aa4.88□□□□□ -1.63
BRCA1-230ENST00000634433 DNAH3Q8TD57 4116 aa4.88□□□□□ -1.63
BRCA1-230ENST00000634433 MEGF8Q7Z7M0 2845 aa4.88□□□□□ -1.63
BRCA1-230ENST00000634433 TCL1BO95988 128 aa4.88□□□□□ -1.63
BRCA1-230ENST00000634433 PFN2P35080 140 aa4.88□□□□□ -1.63
BRCA1-230ENST00000634433 CLPSL2Q6UWE3 100 aa4.88□□□□□ -1.63
BRCA1-230ENST00000634433 Q6ZRU5 148 aa4.88□□□□□ -1.63
BRCA1-230ENST00000634433 TRAV13-2A0A0B4J235 113 aa4.87□□□□□ -1.63
BRCA1-230ENST00000634433 A0A0J9YWU9 116 aa4.87□□□□□ -1.63
BRCA1-230ENST00000634433 WFDC2Q14508 124 aa4.87□□□□□ -1.63
BRCA1-230ENST00000634433 Q6ZTC4 211 aa4.87□□□□□ -1.63
BRCA1-230ENST00000634433 PRO0461Q9UI25 63 aa4.87□□□□□ -1.63
BRCA1-230ENST00000634433 MGAM2Q2M2H8 2515 aa4.87□□□□□ -1.63
BRCA1-230ENST00000634433 NDUFC2O95298 119 aa4.87□□□□□ -1.63
BRCA1-230ENST00000634433 MIR7-3HGQ8N6C7 128 aa4.87□□□□□ -1.63
BRCA1-230ENST00000634433 BRK1Q8WUW1 75 aa4.87□□□□□ -1.63
BRCA1-230ENST00000634433 PRR34Q9NV39 138 aa4.87□□□□□ -1.63
BRCA1-230ENST00000634433 DEFB131BA0A096LNP1 70 aa4.86□□□□□ -1.63
BRCA1-230ENST00000634433 CRPP02741 224 aa4.86□□□□□ -1.63
BRCA1-230ENST00000634433 COX17Q14061 63 aa4.86□□□□□ -1.63
BRCA1-230ENST00000634433 KLK5Q9Y337 293 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-230ENST00000634433 NDUFS5O43920 106 aa4.86□□□□□ -1.63
BRCA1-230ENST00000634433 FOXI1Q12951 378 aa4.86□□□□□ -1.63
BRCA1-230ENST00000634433 SOSTDC1Q6X4U4 206 aa4.86□□□□□ -1.63
BRCA1-230ENST00000634433 KLK12Q9UKR0 248 aa4.86□□□□□ -1.63
BRCA1-230ENST00000634433 MUC7Q8TAX7 377 aa4.85□□□□□ -1.63
BRCA1-230ENST00000634433 IGLV10-54A0A075B6I4 117 aa4.85□□□□□ -1.63
BRCA1-230ENST00000634433 NANOS2P60321 138 aaKnown RBP4.85□□□□□ -1.63
BRCA1-230ENST00000634433 TM2D3Q9BRN9 247 aa4.85□□□□□ -1.63
BRCA1-230ENST00000634433 SND1-IT1Q9HBX3 110 aa4.85□□□□□ -1.63
BRCA1-230ENST00000634433 TRAV10A0A0B4J240 114 aa4.84□□□□□ -1.63
BRCA1-230ENST00000634433 CDK2AP2O75956 126 aa4.84□□□□□ -1.63
BRCA1-230ENST00000634433 KIAA0087Q14695 138 aa4.84□□□□□ -1.63
BRCA1-230ENST00000634433 ETDBQ3ZM63 59 aa4.84□□□□□ -1.63
BRCA1-230ENST00000634433 DEFB121Q5J5C9 76 aa4.84□□□□□ -1.63
BRCA1-230ENST00000634433 C15orf53Q8NAA6 179 aa4.84□□□□□ -1.63
BRCA1-230ENST00000634433 CCL18P55774 89 aa4.84□□□□□ -1.64
BRCA1-230ENST00000634433 ENHOQ6UWT2 76 aa4.84□□□□□ -1.64
BRCA1-230ENST00000634433 Q8N3U1 123 aa4.84□□□□□ -1.64
BRCA1-230ENST00000634433 C3orf22Q8N5N4 141 aa4.84□□□□□ -1.64
BRCA1-230ENST00000634433 ZNF706Q9Y5V0 76 aaPredicted RBP4.84□□□□□ -1.64
BRCA1-230ENST00000634433 SLC25A20O43772 301 aa4.83□□□□□ -1.64
BRCA1-230ENST00000634433 UBE2WQ96B02 151 aa4.83□□□□□ -1.64
BRCA1-230ENST00000634433 PKD1L1Q8TDX9 2849 aa4.83□□□□□ -1.64
BRCA1-230ENST00000634433 TRBV10-2A0A0K0K1G8 114 aa4.83□□□□□ -1.64
BRCA1-230ENST00000634433 H0Y9J4 135 aa4.83□□□□□ -1.64
BRCA1-230ENST00000634433 K7EIL1 84 aa4.83□□□□□ -1.64
BRCA1-230ENST00000634433 LST1O00453 97 aa4.83□□□□□ -1.64
BRCA1-230ENST00000634433 SPAG11BQ08648 103 aa4.83□□□□□ -1.64
BRCA1-230ENST00000634433 ESRGQ1W209 222 aa4.83□□□□□ -1.64
BRCA1-230ENST00000634433 LINC01600Q96MT4 127 aa4.83□□□□□ -1.64
BRCA1-230ENST00000634433 SMCPP49901 116 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-230ENST00000634433 C6orf99Q4VX62 202 aa4.82□□□□□ -1.64
BRCA1-230ENST00000634433 LINC01556Q5JQF7 62 aa4.82□□□□□ -1.64
BRCA1-230ENST00000634433 TEN1Q86WV5 123 aa4.82□□□□□ -1.64
BRCA1-230ENST00000634433 RPL28P46779 137 aaKnown RBP4.82□□□□□ -1.64
BRCA1-230ENST00000634433 C2orf82Q6UX34 121 aa4.82□□□□□ -1.64
BRCA1-230ENST00000634433 WFDC10BQ8IUB3 73 aa4.82□□□□□ -1.64
BRCA1-230ENST00000634433 PPDPFLQ8WWR9 84 aa4.82□□□□□ -1.64
BRCA1-230ENST00000634433 H3BT86 120 aa4.81□□□□□ -1.64
BRCA1-230ENST00000634433 GVQW2A0A096LPI5 108 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-230ENST00000634433 PRKDCP78527 4128 aaKnown RBP4.81□□□□□ -1.64
BRCA1-230ENST00000634433 TGP01266 2768 aa4.8□□□□□ -1.64
BRCA1-230ENST00000634433 IGKV2-28A0A075B6P5 120 aa4.8□□□□□ -1.64
BRCA1-230ENST00000634433 H0YGX0 51 aa4.8□□□□□ -1.64
BRCA1-230ENST00000634433 IGKV2D-28P01615 120 aa4.8□□□□□ -1.64
BRCA1-230ENST00000634433 PRB2P02812 416 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-230ENST00000634433 NDUFV3P56181 108 aaKnown RBP4.8□□□□□ -1.64
BRCA1-230ENST00000634433 TRACP01848 142 aa4.8□□□□□ -1.64
BRCA1-230ENST00000634433 MT-ATP8P03928 68 aa4.8□□□□□ -1.64
BRCA1-230ENST00000634433 CLEC2BQ92478 149 aa4.8□□□□□ -1.64
BRCA1-230ENST00000634433 DNAH10OSP0CZ25 163 aa4.79□□□□□ -1.64
BRCA1-230ENST00000634433 UNQ6190/PRO20217Q6UXQ8 127 aa4.79□□□□□ -1.64
BRCA1-230ENST00000634433 NTN5Q8WTR8 489 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-230ENST00000634433 LINC00313P59037 77 aa4.78□□□□□ -1.64
BRCA1-230ENST00000634433 SMIM11BQ8TCY0 68 aa4.78□□□□□ -1.64
BRCA1-230ENST00000634433 WWC2-AS2Q96NR7 200 aa4.78□□□□□ -1.64
BRCA1-230ENST00000634433 NOTCH1P46531 2555 aa4.78□□□□□ -1.64
BRCA1-230ENST00000634433 A8MUN3 132 aa4.78□□□□□ -1.64
BRCA1-230ENST00000634433 PRR3P79522 188 aaKnown RBP4.77□□□□□ -1.65
BRCA1-230ENST00000634433 KRTAP26-1Q6PEX3 210 aa4.77□□□□□ -1.65
BRCA1-230ENST00000634433 RMI2Q96E14 147 aa4.77□□□□□ -1.65
BRCA1-230ENST00000634433 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
BRCA1-230ENST00000634433 IGKV2D-24A0A075B6R9 120 aa4.77□□□□□ -1.65
BRCA1-230ENST00000634433 SNCGO76070 127 aa4.77□□□□□ -1.65
BRCA1-230ENST00000634433 C9orf116Q5BN46 136 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-230ENST00000634433 C10orf25Q5T742 122 aa4.77□□□□□ -1.65
BRCA1-230ENST00000634433 CAMK2N2Q96S95 79 aa4.77□□□□□ -1.65
BRCA1-230ENST00000634433 C3orf84H3BNL1 204 aa4.76□□□□□ -1.65
BRCA1-230ENST00000634433 DNAL4O96015 105 aa4.76□□□□□ -1.65
BRCA1-230ENST00000634433 DPH3Q96FX2 82 aa4.76□□□□□ -1.65
BRCA1-230ENST00000634433 LINC00588Q9Y4M8 146 aa4.76□□□□□ -1.65
BRCA1-230ENST00000634433 BAALC-AS2P0C853 105 aa4.75□□□□□ -1.65
BRCA1-230ENST00000634433 S100A7L2Q5SY68 101 aa4.75□□□□□ -1.65
BRCA1-230ENST00000634433 B9D2Q9BPU9 175 aa4.75□□□□□ -1.65
BRCA1-230ENST00000634433 UPK3BQ9BT76 320 aa4.75□□□□□ -1.65
BRCA1-230ENST00000634433 C6orf48Q9UBA6 75 aa4.75□□□□□ -1.65
BRCA1-230ENST00000634433 TENM3Q9P273 2699 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms