RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 LITAFQ99732 161 aa5.85□□□□□ -1.47
PTPDC1-204ENST00000620992 CELA1Q9UNI1 258 aa5.85□□□□□ -1.47
PTPDC1-204ENST00000620992 TRBV30A0A0K0K1B3 111 aa5.84□□□□□ -1.47
PTPDC1-204ENST00000620992 CHKB-CPT1BH3BT56 60 aa5.84□□□□□ -1.47
PTPDC1-204ENST00000620992 PRR4Q16378 134 aa5.84□□□□□ -1.47
PTPDC1-204ENST00000620992 C11orf72Q8NBR9 251 aa5.84□□□□□ -1.47
PTPDC1-204ENST00000620992 CDC42SE2Q9NRR3 84 aa5.84□□□□□ -1.47
PTPDC1-204ENST00000620992 A0A096LNT2 108 aa5.84□□□□□ -1.47
PTPDC1-204ENST00000620992 USP17L23D6RBM5 183 aa5.84□□□□□ -1.47
PTPDC1-204ENST00000620992 LINC00242Q5T6M2 205 aa5.84□□□□□ -1.47
PTPDC1-204ENST00000620992 PKIGQ9Y2B9 76 aa5.84□□□□□ -1.47
PTPDC1-204ENST00000620992 IBA57-AS1B1ANH7 110 aa5.83□□□□□ -1.48
PTPDC1-204ENST00000620992 TMEM256-PLSCR3K7ERE1 68 aa5.83□□□□□ -1.48
PTPDC1-204ENST00000620992 SDIM1Q6ZPB5 146 aa5.83□□□□□ -1.48
PTPDC1-204ENST00000620992 WFDC13Q8IUB5 93 aa5.83□□□□□ -1.48
PTPDC1-204ENST00000620992 SPANXDQ9BXN6 97 aa5.83□□□□□ -1.48
PTPDC1-204ENST00000620992 C16orf95Q9H693 158 aa5.83□□□□□ -1.48
PTPDC1-204ENST00000620992 FHL2Q14192 279 aa5.83□□□□□ -1.48
PTPDC1-204ENST00000620992 ACYP1P07311 99 aa5.83□□□□□ -1.48
PTPDC1-204ENST00000620992 PLAC8L1A1L4L8 177 aa5.82□□□□□ -1.48
PTPDC1-204ENST00000620992 H7C423 109 aa5.82□□□□□ -1.48
PTPDC1-204ENST00000620992 MP68P56378 58 aa5.82□□□□□ -1.48
PTPDC1-204ENST00000620992 CIRBP-AS1Q8TBR5 109 aa5.82□□□□□ -1.48
PTPDC1-204ENST00000620992 NUPR2A6NF83 97 aa5.81□□□□□ -1.48
PTPDC1-204ENST00000620992 JMJD7-PLA2G4BH0Y9G9 81 aa5.81□□□□□ -1.48
PTPDC1-204ENST00000620992 IGLV5-52A0A0A0MRZ9 124 aa5.81□□□□□ -1.48
PTPDC1-204ENST00000620992 M0QXV9 152 aa5.81□□□□□ -1.48
PTPDC1-204ENST00000620992 Q8N3U1 123 aa5.81□□□□□ -1.48
PTPDC1-204ENST00000620992 FSHBP01225 129 aa5.81□□□□□ -1.48
PTPDC1-204ENST00000620992 BEAN1Q3B7T3 259 aa5.81□□□□□ -1.48
PTPDC1-204ENST00000620992 LINC01556Q5JQF7 62 aa5.8□□□□□ -1.48
PTPDC1-204ENST00000620992 CR1P17927 2039 aa5.8□□□□□ -1.48
PTPDC1-204ENST00000620992 SMIM11BQ8TCY0 68 aa5.8□□□□□ -1.48
PTPDC1-204ENST00000620992 LST1O00453 97 aa5.79□□□□□ -1.48
PTPDC1-204ENST00000620992 DEFB116Q30KQ4 102 aa5.79□□□□□ -1.48
PTPDC1-204ENST00000620992 RETNLBQ9BQ08 111 aa5.79□□□□□ -1.48
PTPDC1-204ENST00000620992 NIPBLQ6KC79 2804 aaeCLIP5.79□□□□□ -1.48
PTPDC1-204ENST00000620992 TRBV10-3A0A0K0K1G6 114 aa5.79□□□□□ -1.48
PTPDC1-204ENST00000620992 SMIM1B2RUZ4 78 aa5.79□□□□□ -1.48
PTPDC1-204ENST00000620992 H3BT86 120 aa5.79□□□□□ -1.48
PTPDC1-204ENST00000620992 ENHOQ6UWT2 76 aa5.79□□□□□ -1.48
PTPDC1-204ENST00000620992 LYPD5Q6UWN5 251 aa5.79□□□□□ -1.48
PTPDC1-204ENST00000620992 NTM-AS1Q6ZSK4 140 aa5.79□□□□□ -1.48
PTPDC1-204ENST00000620992 TIMM17BO60830 172 aa5.78□□□□□ -1.48
PTPDC1-204ENST00000620992 C1orf134Q5TEV5 83 aa5.78□□□□□ -1.48
PTPDC1-204ENST00000620992 C20orf197Q8N268 126 aa5.78□□□□□ -1.48
PTPDC1-204ENST00000620992 Q8N2B8 174 aa5.78□□□□□ -1.48
PTPDC1-204ENST00000620992 LOC107984640A0A0U1RRK4 108 aa5.78□□□□□ -1.48
PTPDC1-204ENST00000620992 ZNF73O43830 326 aaPredicted RBP5.78□□□□□ -1.48
PTPDC1-204ENST00000620992 PRLHP81277 87 aa5.77□□□□□ -1.49
PTPDC1-204ENST00000620992 C1orf137Q5JT78 98 aa5.77□□□□□ -1.49
PTPDC1-204ENST00000620992 MDFIQ99750 246 aa5.77□□□□□ -1.49
PTPDC1-204ENST00000620992 IGLV5-45A0A087WSX0 123 aa5.77□□□□□ -1.49
PTPDC1-204ENST00000620992 SOSTDC1Q6X4U4 206 aa5.77□□□□□ -1.49
PTPDC1-204ENST00000620992 M0R378 163 aa5.76□□□□□ -1.49
PTPDC1-204ENST00000620992 CASC2Q6XLA1 102 aa5.76□□□□□ -1.49
PTPDC1-204ENST00000620992 UPK3BQ9BT76 320 aa5.76□□□□□ -1.49
PTPDC1-204ENST00000620992 FAM30AQ9NZY2 134 aa5.76□□□□□ -1.49
PTPDC1-204ENST00000620992 IGLV5-39A0A0G2JS06 123 aa5.76□□□□□ -1.49
PTPDC1-204ENST00000620992 NDUFV3P56181 108 aaKnown RBP5.76□□□□□ -1.49
PTPDC1-204ENST00000620992 ESRGQ1W209 222 aa5.76□□□□□ -1.49
PTPDC1-204ENST00000620992 APCP25054 2843 aa5.76□□□□□ -1.49
PTPDC1-204ENST00000620992 TENM3Q9P273 2699 aa5.76□□□□□ -1.49
PTPDC1-204ENST00000620992 CCDC179H3BU77 68 aa5.75□□□□□ -1.49
PTPDC1-204ENST00000620992 Q6ZRU5 148 aa5.75□□□□□ -1.49
PTPDC1-204ENST00000620992 X6R8D5 127 aa5.74□□□□□ -1.49
PTPDC1-204ENST00000620992 CSDC2Q9Y534 153 aaKnown RBP5.73□□□□□ -1.49
PTPDC1-204ENST00000620992 Q8IZM0 81 aa5.73□□□□□ -1.49
PTPDC1-204ENST00000620992 ZNF469Q96JG9 3925 aaPredicted RBP5.73□□□□□ -1.49
PTPDC1-204ENST00000620992 NHLRC4P0CG21 123 aaPredicted RBP5.71□□□□□ -1.49
PTPDC1-204ENST00000620992 EGFEM1PQ0D2K5 195 aa5.71□□□□□ -1.49
PTPDC1-204ENST00000620992 C3orf22Q8N5N4 141 aa5.71□□□□□ -1.49
PTPDC1-204ENST00000620992 FAM218AQ96MZ4 157 aa5.71□□□□□ -1.49
PTPDC1-204ENST00000620992 GIG44P09565 113 aaPredicted RBP5.71□□□□□ -1.5
PTPDC1-204ENST00000620992 SNURFQ9Y675 71 aa5.71□□□□□ -1.5
PTPDC1-204ENST00000620992 PKD1L1Q8TDX9 2849 aa5.71□□□□□ -1.5
PTPDC1-204ENST00000620992 LINC00337Q8N6G1 96 aa5.7□□□□□ -1.5
PTPDC1-204ENST00000620992 CHTF8P0CG12 524 aa5.7□□□□□ -1.5
PTPDC1-204ENST00000620992 MPLKIPQ8TAP9 179 aa5.7□□□□□ -1.5
PTPDC1-204ENST00000620992 KRTAP1-3Q8IUG1 177 aa5.69□□□□□ -1.5
PTPDC1-204ENST00000620992 A0A087WSZ3 146 aa5.69□□□□□ -1.5
PTPDC1-204ENST00000620992 FAM240AA0A1B0GVK7 77 aa5.69□□□□□ -1.5
PTPDC1-204ENST00000620992 ATOX1O00244 68 aa5.69□□□□□ -1.5
PTPDC1-204ENST00000620992 RPL28P46779 137 aaKnown RBP5.69□□□□□ -1.5
PTPDC1-204ENST00000620992 NDUFC2-KCTD14E9PQ53 114 aa5.69□□□□□ -1.5
PTPDC1-204ENST00000620992 Q6Q795 121 aa5.69□□□□□ -1.5
PTPDC1-204ENST00000620992 LINC00643Q86TS7 51 aa5.69□□□□□ -1.5
PTPDC1-204ENST00000620992 PDE6GP18545 87 aa5.68□□□□□ -1.5
PTPDC1-204ENST00000620992 LINC01600Q96MT4 127 aa5.68□□□□□ -1.5
PTPDC1-204ENST00000620992 IGHV6-1A0A0B4J1U7 121 aa5.68□□□□□ -1.5
PTPDC1-204ENST00000620992 C10orf25Q5T742 122 aa5.68□□□□□ -1.5
PTPDC1-204ENST00000620992 FAM19A3Q7Z5A8 133 aa5.68□□□□□ -1.5
PTPDC1-204ENST00000620992 A0A087WYN8 130 aa5.68□□□□□ -1.5
PTPDC1-204ENST00000620992 REG3GQ6UW15 175 aa5.67□□□□□ -1.5
PTPDC1-204ENST00000620992 SVIPQ8NHG7 77 aa5.67□□□□□ -1.5
PTPDC1-204ENST00000620992 DHRS4-AS1Q9P1J3 65 aa5.67□□□□□ -1.5
PTPDC1-204ENST00000620992 A0A087WVE0 104 aa5.67□□□□□ -1.5
PTPDC1-204ENST00000620992 IGHV3OR16-9A0A0B4J2B5 98 aa5.67□□□□□ -1.5
PTPDC1-204ENST00000620992 SRRM2Q9UQ35 2752 aaKnown RBP5.67□□□□□ -1.5
PTPDC1-204ENST00000620992 NBPF19A0A087WUL8 3843 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms