RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 SMIM29Q86T20 159 aa5.7□□□□□ -1.5
ALMS1-208ENST00000620466 C1orf64Q8NEQ6 169 aa5.7□□□□□ -1.5
ALMS1-208ENST00000620466 CHD9Q3L8U1 2897 aa5.7□□□□□ -1.5
ALMS1-208ENST00000620466 Q6ZQT0 140 aa5.7□□□□□ -1.5
ALMS1-208ENST00000620466 PHF5AQ7RTV0 110 aaKnown RBP5.69□□□□□ -1.5
ALMS1-208ENST00000620466 ELOF1P60002 83 aaKnown RBP5.69□□□□□ -1.5
ALMS1-208ENST00000620466 MKI67P46013 3256 aaKnown RBP5.68□□□□□ -1.5
ALMS1-208ENST00000620466 hDV103S1A0JD37 113 aa5.68□□□□□ -1.5
ALMS1-208ENST00000620466 WNK1Q9H4A3 2382 aa5.68□□□□□ -1.5
ALMS1-208ENST00000620466 SPG11Q96JI7 2443 aa5.68□□□□□ -1.5
ALMS1-208ENST00000620466 LOC110117498A0A087WWA1 95 aa5.68□□□□□ -1.5
ALMS1-208ENST00000620466 CSPG4Q6UVK1 2322 aa5.68□□□□□ -1.5
ALMS1-208ENST00000620466 HIVEP2P31629 2446 aa5.67□□□□□ -1.5
ALMS1-208ENST00000620466 SORL1Q92673 2214 aa5.67□□□□□ -1.5
ALMS1-208ENST00000620466 LINC00167Q96N53 147 aa5.67□□□□□ -1.5
ALMS1-208ENST00000620466 CSNK1G2-AS1Q8NCQ2 148 aa5.67□□□□□ -1.5
ALMS1-208ENST00000620466 IGF2RP11717 2491 aa5.67□□□□□ -1.5
ALMS1-208ENST00000620466 A0A096LNT2 108 aa5.67□□□□□ -1.5
ALMS1-208ENST00000620466 C16orf90A8MZG2 172 aa5.66□□□□□ -1.5
ALMS1-208ENST00000620466 TYMSOSQ8TAI1 123 aa5.66□□□□□ -1.5
ALMS1-208ENST00000620466 CUL9Q8IWT3 2517 aa5.66□□□□□ -1.5
ALMS1-208ENST00000620466 BDP1A6H8Y1 2624 aa5.66□□□□□ -1.5
ALMS1-208ENST00000620466 A0A1B0GU69 56 aa5.65□□□□□ -1.5
ALMS1-208ENST00000620466 Q8NAQ8 132 aa5.65□□□□□ -1.5
ALMS1-208ENST00000620466 LINC00313P59037 77 aa5.65□□□□□ -1.51
ALMS1-208ENST00000620466 Q8NBF4 154 aa5.64□□□□□ -1.51
ALMS1-208ENST00000620466 ACYP2P14621 99 aa5.64□□□□□ -1.51
ALMS1-208ENST00000620466 KRTAP24-1Q3LI83 254 aa5.64□□□□□ -1.51
ALMS1-208ENST00000620466 BCE1O60756 84 aa5.63□□□□□ -1.51
ALMS1-208ENST00000620466 SPAG11AQ6PDA7 123 aa5.63□□□□□ -1.51
ALMS1-208ENST00000620466 MUC4Q99102 2169 aa5.63□□□□□ -1.51
ALMS1-208ENST00000620466 GIG44P09565 113 aaPredicted RBP5.63□□□□□ -1.51
ALMS1-208ENST00000620466 NBDYA0A0U1RRE5 68 aa5.63□□□□□ -1.51
ALMS1-208ENST00000620466 TP53AIP1Q9HCN2 124 aa5.63□□□□□ -1.51
ALMS1-208ENST00000620466 H3BNG1 76 aa5.63□□□□□ -1.51
ALMS1-208ENST00000620466 IGLV6-57P01721 117 aa5.63□□□□□ -1.51
ALMS1-208ENST00000620466 Q6ZRP5 223 aa5.63□□□□□ -1.51
ALMS1-208ENST00000620466 J3QL48 77 aa5.62□□□□□ -1.51
ALMS1-208ENST00000620466 RPL37AP61513 92 aaKnown RBP5.62□□□□□ -1.51
ALMS1-208ENST00000620466 EPM2AB3EWF7 344 aa5.62□□□□□ -1.51
ALMS1-208ENST00000620466 Q96NJ1 140 aa5.62□□□□□ -1.51
ALMS1-208ENST00000620466 GVQW2A0A096LPI5 108 aaPredicted RBP5.62□□□□□ -1.51
ALMS1-208ENST00000620466 ATRXP46100 2492 aa5.61□□□□□ -1.51
ALMS1-208ENST00000620466 RPS28P62857 69 aaKnown RBP5.61□□□□□ -1.51
ALMS1-208ENST00000620466 LINC00476Q8WZB0 136 aa5.6□□□□□ -1.51
ALMS1-208ENST00000620466 LINC00588Q9Y4M8 146 aa5.6□□□□□ -1.51
ALMS1-208ENST00000620466 TLN1Q9Y490 2541 aaKnown RBP5.6□□□□□ -1.51
ALMS1-208ENST00000620466 TM2D3Q9BRN9 247 aa5.6□□□□□ -1.51
ALMS1-208ENST00000620466 C19orf73Q9NVV2 129 aa5.6□□□□□ -1.51
ALMS1-208ENST00000620466 Q6ZRX8 168 aa5.59□□□□□ -1.51
ALMS1-208ENST00000620466 ST20-AS1Q8NBB2 130 aa5.59□□□□□ -1.51
ALMS1-208ENST00000620466 ATP11AUNQ6ZP68 121 aa5.59□□□□□ -1.52
ALMS1-208ENST00000620466 KRTAP10-3P60369 221 aa5.58□□□□□ -1.52
ALMS1-208ENST00000620466 C9orf129Q5T035 196 aaKnown RBP5.58□□□□□ -1.52
ALMS1-208ENST00000620466 FAM104AQ969W3 186 aa5.58□□□□□ -1.52
ALMS1-208ENST00000620466 ACACBO00763 2458 aa5.58□□□□□ -1.52
ALMS1-208ENST00000620466 NAV2Q8IVL1 2488 aa5.58□□□□□ -1.52
ALMS1-208ENST00000620466 TRANK1O15050 2925 aa5.58□□□□□ -1.52
ALMS1-208ENST00000620466 WWC2-AS2Q96NR7 200 aa5.57□□□□□ -1.52
ALMS1-208ENST00000620466 PRO0628Q9UI54 55 aa5.57□□□□□ -1.52
ALMS1-208ENST00000620466 C8orf87E5RJ46 101 aa5.57□□□□□ -1.52
ALMS1-208ENST00000620466 FAM168BA1KXE4 195 aa5.56□□□□□ -1.52
ALMS1-208ENST00000620466 LINC00612Q8N6U2 182 aa5.56□□□□□ -1.52
ALMS1-208ENST00000620466 NCOR2Q9Y618 2525 aa5.56□□□□□ -1.52
ALMS1-208ENST00000620466 TRAV22A0A0B4J277 110 aa5.56□□□□□ -1.52
ALMS1-208ENST00000620466 A0A1B0GW54 56 aa5.56□□□□□ -1.52
ALMS1-208ENST00000620466 LINC01554Q52M75 96 aa5.56□□□□□ -1.52
ALMS1-208ENST00000620466 A0A0C4DFX4 3053 aa5.55□□□□□ -1.52
ALMS1-208ENST00000620466 IGLV8-61A0A075B6I0 122 aa5.55□□□□□ -1.52
ALMS1-208ENST00000620466 HIVEP3Q5T1R4 2406 aa5.54□□□□□ -1.52
ALMS1-208ENST00000620466 LINC01600Q96MT4 127 aa5.54□□□□□ -1.52
ALMS1-208ENST00000620466 PRR34Q9NV39 138 aa5.54□□□□□ -1.52
ALMS1-208ENST00000620466 KRTAP1-3Q8IUG1 177 aa5.53□□□□□ -1.52
ALMS1-208ENST00000620466 C15orf56Q8N910 161 aa5.53□□□□□ -1.52
ALMS1-208ENST00000620466 CDH23Q9H251 3354 aa5.53□□□□□ -1.52
ALMS1-208ENST00000620466 COX6B2Q6YFQ2 88 aa5.52□□□□□ -1.53
ALMS1-208ENST00000620466 LINC00528Q8N1L1 170 aa5.52□□□□□ -1.53
ALMS1-208ENST00000620466 IGLV1-50A0A075B6I6 118 aa5.52□□□□□ -1.53
ALMS1-208ENST00000620466 H3BPC8 53 aa5.52□□□□□ -1.53
ALMS1-208ENST00000620466 DNAH10OSP0CZ25 163 aa5.52□□□□□ -1.53
ALMS1-208ENST00000620466 KRTAP10-11P60412 298 aa5.52□□□□□ -1.53
ALMS1-208ENST00000620466 KCNQ1DNQ9H478 68 aa5.51□□□□□ -1.53
ALMS1-208ENST00000620466 LAMA3Q16787 3333 aa5.51□□□□□ -1.53
ALMS1-208ENST00000620466 PTPN13Q12923 2485 aa5.51□□□□□ -1.53
ALMS1-208ENST00000620466 C9orf92A6NGG3 77 aa5.5□□□□□ -1.53
ALMS1-208ENST00000620466 DNAH14Q0VDD8 3507 aa5.5□□□□□ -1.53
ALMS1-208ENST00000620466 OBSCN-AS1Q96MR7 158 aa5.5□□□□□ -1.53
ALMS1-208ENST00000620466 K7EQZ3 153 aa5.5□□□□□ -1.53
ALMS1-208ENST00000620466 DSCR10P59022 87 aa5.49□□□□□ -1.53
ALMS1-208ENST00000620466 TRBV7-4A0A0J9YYF1 115 aa5.49□□□□□ -1.53
ALMS1-208ENST00000620466 A8MWP4 228 aa5.49□□□□□ -1.53
ALMS1-208ENST00000620466 UNC80Q8N2C7 3258 aa5.49□□□□□ -1.53
ALMS1-208ENST00000620466 ERC2-IT1O76042 136 aa5.49□□□□□ -1.53
ALMS1-208ENST00000620466 C2CD3Q4AC94 2353 aa5.48□□□□□ -1.53
ALMS1-208ENST00000620466 RANBP2P49792 3224 aaKnown RBP5.48□□□□□ -1.53
ALMS1-208ENST00000620466 LINC00304Q8N9R0 145 aa5.47□□□□□ -1.53
ALMS1-208ENST00000620466 MRPL34Q9BQ48 92 aaKnown RBP5.47□□□□□ -1.53
ALMS1-208ENST00000620466 ANKRD11Q6UB99 2663 aaPredicted RBP5.47□□□□□ -1.53
ALMS1-208ENST00000620466 LOC101927531A0A1B0GV80 90 aa5.47□□□□□ -1.53
ALMS1-208ENST00000620466 Q8N377 158 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms