RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 NAV3Q8IVL0 2385 aa9.99□□□□□ -0.81
PTPN9-206ENST00000618819 IGHV3OR16-9A0A0B4J2B5 98 aa9.99□□□□□ -0.81
PTPN9-206ENST00000618819 TET2Q6N021 2002 aaPredicted RBP9.99□□□□□ -0.81
PTPN9-206ENST00000618819 LOC101927531A0A1B0GV80 90 aa9.98□□□□□ -0.81
PTPN9-206ENST00000618819 LCA10Q71F78 164 aa9.98□□□□□ -0.81
PTPN9-206ENST00000618819 KIF25-AS1Q9Y6Z4 181 aa9.98□□□□□ -0.81
PTPN9-206ENST00000618819 DOPEY1Q5JWR5 2465 aa9.97□□□□□ -0.81
PTPN9-206ENST00000618819 LINC01546A6NGU7 62 aa9.97□□□□□ -0.81
PTPN9-206ENST00000618819 CDSNQ15517 529 aa9.97□□□□□ -0.81
PTPN9-206ENST00000618819 C9orf129Q5T035 196 aaKnown RBP9.97□□□□□ -0.81
PTPN9-206ENST00000618819 Q6ZRX8 168 aa9.96□□□□□ -0.82
PTPN9-206ENST00000618819 EPM2AB3EWF7 344 aa9.95□□□□□ -0.82
PTPN9-206ENST00000618819 ZFHX2Q9C0A1 2572 aaPredicted RBP9.94□□□□□ -0.82
PTPN9-206ENST00000618819 HIVEP3Q5T1R4 2406 aa9.94□□□□□ -0.82
PTPN9-206ENST00000618819 A0A1B0GW54 56 aa9.92□□□□□ -0.82
PTPN9-206ENST00000618819 ANKHD1Q8IWZ3 2542 aaKnown RBP9.92□□□□□ -0.82
PTPN9-206ENST00000618819 IGLV6-57P01721 117 aa9.91□□□□□ -0.82
PTPN9-206ENST00000618819 LRP4O75096 1905 aa9.91□□□□□ -0.82
PTPN9-206ENST00000618819 TYMSOSQ8TAI1 123 aa9.91□□□□□ -0.82
PTPN9-206ENST00000618819 A8MWP4 228 aa9.91□□□□□ -0.82
PTPN9-206ENST00000618819 PTPRSQ13332 1948 aa9.9□□□□□ -0.83
PTPN9-206ENST00000618819 MRPL34Q9BQ48 92 aaKnown RBP9.89□□□□□ -0.83
PTPN9-206ENST00000618819 LINC01554Q52M75 96 aa9.88□□□□□ -0.83
PTPN9-206ENST00000618819 A0A0D9SG42 100 aa9.87□□□□□ -0.83
PTPN9-206ENST00000618819 LINC00315P59091 139 aa9.87□□□□□ -0.83
PTPN9-206ENST00000618819 KRTAP10-9P60411 292 aa9.87□□□□□ -0.83
PTPN9-206ENST00000618819 FHL3Q13643 280 aa9.87□□□□□ -0.83
PTPN9-206ENST00000618819 ERC2-IT1O76042 136 aa9.86□□□□□ -0.83
PTPN9-206ENST00000618819 IGLV5-45A0A087WSX0 123 aa9.86□□□□□ -0.83
PTPN9-206ENST00000618819 DSCR10P59022 87 aa9.85□□□□□ -0.83
PTPN9-206ENST00000618819 FAM229AH3BQW9 127 aa9.84□□□□□ -0.83
PTPN9-206ENST00000618819 FAM168BA1KXE4 195 aa9.84□□□□□ -0.84
PTPN9-206ENST00000618819 NOTCH2Q04721 2471 aa9.82□□□□□ -0.84
PTPN9-206ENST00000618819 CDC42SE1Q9NRR8 79 aa9.82□□□□□ -0.84
PTPN9-206ENST00000618819 LUZP6Q538Z0 58 aa9.81□□□□□ -0.84
PTPN9-206ENST00000618819 C16orf95Q9H693 158 aa9.81□□□□□ -0.84
PTPN9-206ENST00000618819 ABCA2Q9BZC7 2435 aa9.8□□□□□ -0.84
PTPN9-206ENST00000618819 RTL8CO15255 209 aa9.79□□□□□ -0.84
PTPN9-206ENST00000618819 H7BZZ5 65 aa9.79□□□□□ -0.84
PTPN9-206ENST00000618819 KLKP1Q107X0 134 aa9.78□□□□□ -0.84
PTPN9-206ENST00000618819 Q6ZRP5 223 aa9.78□□□□□ -0.84
PTPN9-206ENST00000618819 CPAMD8Q8IZJ3 1885 aa9.78□□□□□ -0.84
PTPN9-206ENST00000618819 H3BS24 57 aa9.78□□□□□ -0.84
PTPN9-206ENST00000618819 C16orf90A8MZG2 172 aa9.77□□□□□ -0.85
PTPN9-206ENST00000618819 LITAFQ99732 161 aa9.77□□□□□ -0.85
PTPN9-206ENST00000618819 A0A0G2JQZ4 141 aa9.76□□□□□ -0.85
PTPN9-206ENST00000618819 A0A1W2PNN7 141 aa9.76□□□□□ -0.85
PTPN9-206ENST00000618819 ACACBO00763 2458 aa9.76□□□□□ -0.85
PTPN9-206ENST00000618819 C9orf92A6NGG3 77 aa9.76□□□□□ -0.85
PTPN9-206ENST00000618819 WIPF1O43516 503 aa9.75□□□□□ -0.85
PTPN9-206ENST00000618819 ADAMTS20P59510 1910 aa9.75□□□□□ -0.85
PTPN9-206ENST00000618819 C8orf17Q9NRJ1 99 aa9.75□□□□□ -0.85
PTPN9-206ENST00000618819 COX6B2Q6YFQ2 88 aa9.74□□□□□ -0.85
PTPN9-206ENST00000618819 OBSCN-AS1Q96MR7 158 aa9.74□□□□□ -0.85
PTPN9-206ENST00000618819 CACNA1AO00555 2505 aa9.74□□□□□ -0.85
PTPN9-206ENST00000618819 CUL9Q8IWT3 2517 aa9.74□□□□□ -0.85
PTPN9-206ENST00000618819 PRR15Q8IV56 129 aa9.73□□□□□ -0.85
PTPN9-206ENST00000618819 MUC6Q6W4X9 2439 aa9.73□□□□□ -0.85
PTPN9-206ENST00000618819 IGFL1Q6UW32 110 aa9.73□□□□□ -0.85
PTPN9-206ENST00000618819 PTPRBP23467 1997 aa9.72□□□□□ -0.85
PTPN9-206ENST00000618819 MYO18BQ8IUG5 2567 aa9.72□□□□□ -0.85
PTPN9-206ENST00000618819 A0A1W2PPR1 153 aa9.71□□□□□ -0.85
PTPN9-206ENST00000618819 BDP1A6H8Y1 2624 aa9.71□□□□□ -0.86
PTPN9-206ENST00000618819 PRO3102Q9H379 93 aa9.7□□□□□ -0.86
PTPN9-206ENST00000618819 RBM12B-AS1Q9P1G2 102 aa9.67□□□□□ -0.86
PTPN9-206ENST00000618819 GVQW2A0A096LPI5 108 aaPredicted RBP9.67□□□□□ -0.86
PTPN9-206ENST00000618819 A0A1B0GVX0 72 aa9.67□□□□□ -0.86
PTPN9-206ENST00000618819 Q8N1X5 172 aa9.66□□□□□ -0.86
PTPN9-206ENST00000618819 IGLV5-48A0A075B6I7 105 aa9.66□□□□□ -0.86
PTPN9-206ENST00000618819 EIF4EBP3O60516 100 aaPredicted RBP9.66□□□□□ -0.86
PTPN9-206ENST00000618819 ZNF575Q86XF7 245 aa9.65□□□□□ -0.86
PTPN9-206ENST00000618819 CCDC168Q8NDH2 2452 aa9.65□□□□□ -0.87
PTPN9-206ENST00000618819 FAM104AQ969W3 186 aa9.65□□□□□ -0.87
PTPN9-206ENST00000618819 LINC00588Q9Y4M8 146 aa9.65□□□□□ -0.87
PTPN9-206ENST00000618819 IGLV1-50A0A075B6I6 118 aa9.64□□□□□ -0.87
PTPN9-206ENST00000618819 ZNF462Q96JM2 2506 aa9.63□□□□□ -0.87
PTPN9-206ENST00000618819 NBDYA0A0U1RRE5 68 aa9.62□□□□□ -0.87
PTPN9-206ENST00000618819 IGLV5-37A0A075B6J1 123 aa9.61□□□□□ -0.87
PTPN9-206ENST00000618819 LINC00528Q8N1L1 170 aa9.61□□□□□ -0.87
PTPN9-206ENST00000618819 Q1T7F1 81 aa9.6□□□□□ -0.87
PTPN9-206ENST00000618819 Q8N377 158 aa9.6□□□□□ -0.87
PTPN9-206ENST00000618819 TTC28Q96AY4 2481 aa9.6□□□□□ -0.87
PTPN9-206ENST00000618819 H3BNG1 76 aa9.59□□□□□ -0.87
PTPN9-206ENST00000618819 KCNQ1DNQ9H478 68 aa9.59□□□□□ -0.87
PTPN9-206ENST00000618819 ANAPC11Q9NYG5 84 aa9.59□□□□□ -0.87
PTPN9-206ENST00000618819 EP400Q96L91 3159 aa9.57□□□□□ -0.88
PTPN9-206ENST00000618819 NAV2Q8IVL1 2488 aa9.57□□□□□ -0.88
PTPN9-206ENST00000618819 PRAC1Q96KF2 57 aa9.57□□□□□ -0.88
PTPN9-206ENST00000618819 C9orf163Q8N9P6 203 aa9.56□□□□□ -0.88
PTPN9-206ENST00000618819 LTBP2Q14767 1821 aa9.56□□□□□ -0.88
PTPN9-206ENST00000618819 CSNK1G2-AS1Q8NCQ2 148 aa9.55□□□□□ -0.88
PTPN9-206ENST00000618819 J3QL48 77 aa9.54□□□□□ -0.88
PTPN9-206ENST00000618819 COL4A4P53420 1690 aaPredicted RBP9.54□□□□□ -0.88
PTPN9-206ENST00000618819 PRR26Q8N8Z3 221 aa9.54□□□□□ -0.88
PTPN9-206ENST00000618819 LINC00304Q8N9R0 145 aa9.54□□□□□ -0.88
PTPN9-206ENST00000618819 Q8NAQ8 132 aa9.53□□□□□ -0.88
PTPN9-206ENST00000618819 SPANXA2-OT1Q8N9U9 137 aa9.52□□□□□ -0.88
PTPN9-206ENST00000618819 DNAH10OSP0CZ25 163 aa9.52□□□□□ -0.89
PTPN9-206ENST00000618819 FN1P02751 2386 aaKnown RBP9.52□□□□□ -0.89
PTPN9-206ENST00000618819 MYO9AB2RTY4 2548 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms