RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 PRLHP81277 87 aa12.88□□□□□ -0.35
CDH23-212ENST00000616684 FSHBP01225 129 aa12.88□□□□□ -0.35
CDH23-212ENST00000616684 CIRBP-AS1Q8TBR5 109 aa12.88□□□□□ -0.35
CDH23-212ENST00000616684 C22orf24Q9Y442 160 aa12.87□□□□□ -0.35
CDH23-212ENST00000616684 TRBV7-7A0A0K0K1E9 115 aa12.86□□□□□ -0.35
CDH23-212ENST00000616684 C6orf48Q9UBA6 75 aa12.86□□□□□ -0.35
CDH23-212ENST00000616684 DEFB116Q30KQ4 102 aa12.85□□□□□ -0.35
CDH23-212ENST00000616684 FAM218AQ96MZ4 157 aa12.85□□□□□ -0.35
CDH23-212ENST00000616684 A6NED7 52 aa12.84□□□□□ -0.35
CDH23-212ENST00000616684 IGHV6-1A0A0B4J1U7 121 aa12.83□□□□□ -0.35
CDH23-212ENST00000616684 SERP1Q9Y6X1 66 aa12.83□□□□□ -0.36
CDH23-212ENST00000616684 CENPEQ02224 2701 aa12.83□□□□□ -0.36
CDH23-212ENST00000616684 PRR15LQ9BU68 103 aa12.83□□□□□ -0.36
CDH23-212ENST00000616684 C5orf42Q9H799 3197 aa12.82□□□□□ -0.36
CDH23-212ENST00000616684 ATRQ13535 2644 aa12.81□□□□□ -0.36
CDH23-212ENST00000616684 SMCR5Q8TEV8 140 aa12.81□□□□□ -0.36
CDH23-212ENST00000616684 TMEM254Q8TBM7 123 aa12.8□□□□□ -0.36
CDH23-212ENST00000616684 KIAA0087Q14695 138 aa12.79□□□□□ -0.36
CDH23-212ENST00000616684 SPATA3Q8NHX4 192 aa12.79□□□□□ -0.36
CDH23-212ENST00000616684 C1orf134Q5TEV5 83 aa12.79□□□□□ -0.36
CDH23-212ENST00000616684 MAST4O15021 2626 aa12.78□□□□□ -0.36
CDH23-212ENST00000616684 H3BNG1 76 aa12.78□□□□□ -0.36
CDH23-212ENST00000616684 LINC00167Q96N53 147 aa12.78□□□□□ -0.36
CDH23-212ENST00000616684 CXCL6P80162 114 aa12.77□□□□□ -0.36
CDH23-212ENST00000616684 SBSPONQ8IVN8 264 aa12.76□□□□□ -0.37
CDH23-212ENST00000616684 K7ERS5 55 aa12.76□□□□□ -0.37
CDH23-212ENST00000616684 Q8NAQ8 132 aa12.76□□□□□ -0.37
CDH23-212ENST00000616684 RANBP2P49792 3224 aaKnown RBP12.75□□□□□ -0.37
CDH23-212ENST00000616684 HCG22E2RYF7 251 aa12.74□□□□□ -0.37
CDH23-212ENST00000616684 NHLRC4P0CG21 123 aaPredicted RBP12.74□□□□□ -0.37
CDH23-212ENST00000616684 LITAFQ99732 161 aa12.74□□□□□ -0.37
CDH23-212ENST00000616684 PCOTHQ58A44 107 aa12.73□□□□□ -0.37
CDH23-212ENST00000616684 KRTAP24-1Q3LI83 254 aa12.73□□□□□ -0.37
CDH23-212ENST00000616684 H0Y9P7 68 aa12.72□□□□□ -0.37
CDH23-212ENST00000616684 FLNAP21333 2647 aaKnown RBP12.7□□□□□ -0.38
CDH23-212ENST00000616684 ELOF1P60002 83 aaKnown RBP12.7□□□□□ -0.38
CDH23-212ENST00000616684 TRBV7-6A0A0J9YX20 115 aa12.69□□□□□ -0.38
CDH23-212ENST00000616684 MDFIQ99750 246 aa12.69□□□□□ -0.38
CDH23-212ENST00000616684 CHD9Q3L8U1 2897 aa12.69□□□□□ -0.38
CDH23-212ENST00000616684 SMIM29Q86T20 159 aa12.64□□□□□ -0.39
CDH23-212ENST00000616684 RETNLBQ9BQ08 111 aa12.64□□□□□ -0.39
CDH23-212ENST00000616684 Q6ZQT0 140 aa12.64□□□□□ -0.39
CDH23-212ENST00000616684 ITPR3Q14573 2671 aa12.63□□□□□ -0.39
CDH23-212ENST00000616684 CSNK1G2-AS1Q8NCQ2 148 aa12.63□□□□□ -0.39
CDH23-212ENST00000616684 HTTP42858 3142 aa12.63□□□□□ -0.39
CDH23-212ENST00000616684 Q6ZRX8 168 aa12.62□□□□□ -0.39
CDH23-212ENST00000616684 A0A096LNT2 108 aa12.62□□□□□ -0.39
CDH23-212ENST00000616684 LINC00588Q9Y4M8 146 aa12.61□□□□□ -0.39
CDH23-212ENST00000616684 CRYGAP11844 174 aa12.61□□□□□ -0.39
CDH23-212ENST00000616684 hDV103S1A0JD37 113 aa12.6□□□□□ -0.39
CDH23-212ENST00000616684 EIF4EBP3O60516 100 aaPredicted RBP12.6□□□□□ -0.39
CDH23-212ENST00000616684 PSPHP1O15172 72 aa12.59□□□□□ -0.39
CDH23-212ENST00000616684 Q8NBF4 154 aa12.59□□□□□ -0.39
CDH23-212ENST00000616684 LOC110117498A0A087WWA1 95 aa12.59□□□□□ -0.39
CDH23-212ENST00000616684 GVQW2A0A096LPI5 108 aaPredicted RBP12.59□□□□□ -0.39
CDH23-212ENST00000616684 C1orf64Q8NEQ6 169 aa12.59□□□□□ -0.39
CDH23-212ENST00000616684 C1orf195Q5TG92 126 aa12.58□□□□□ -0.4
CDH23-212ENST00000616684 HELZ2Q9BYK8 2649 aaKnown RBP12.58□□□□□ -0.4
CDH23-212ENST00000616684 A0A1B0GW54 56 aa12.58□□□□□ -0.4
CDH23-212ENST00000616684 Q6ZRP5 223 aa12.57□□□□□ -0.4
CDH23-212ENST00000616684 CFAP46Q8IYW2 2715 aa12.56□□□□□ -0.4
CDH23-212ENST00000616684 BCE1O60756 84 aa12.56□□□□□ -0.4
CDH23-212ENST00000616684 PHF5AQ7RTV0 110 aaKnown RBP12.56□□□□□ -0.4
CDH23-212ENST00000616684 MOBPQ13875 183 aa12.56□□□□□ -0.4
CDH23-212ENST00000616684 LINC00476Q8WZB0 136 aa12.56□□□□□ -0.4
CDH23-212ENST00000616684 VPREB1P12018 145 aa12.55□□□□□ -0.4
CDH23-212ENST00000616684 ST20-AS1Q8NBB2 130 aa12.55□□□□□ -0.4
CDH23-212ENST00000616684 IGLV6-57P01721 117 aa12.53□□□□□ -0.4
CDH23-212ENST00000616684 GIG44P09565 113 aaPredicted RBP12.53□□□□□ -0.4
CDH23-212ENST00000616684 CFAP54Q96N23 3096 aa12.52□□□□□ -0.4
CDH23-212ENST00000616684 LIMD2Q9BT23 127 aa12.52□□□□□ -0.4
CDH23-212ENST00000616684 C16orf90A8MZG2 172 aa12.52□□□□□ -0.41
CDH23-212ENST00000616684 DNAH10OSP0CZ25 163 aa12.52□□□□□ -0.41
CDH23-212ENST00000616684 PMAIP1Q13794 54 aa12.52□□□□□ -0.41
CDH23-212ENST00000616684 NBDYA0A0U1RRE5 68 aa12.51□□□□□ -0.41
CDH23-212ENST00000616684 C19orf73Q9NVV2 129 aa12.51□□□□□ -0.41
CDH23-212ENST00000616684 SPINK1P00995 79 aa12.51□□□□□ -0.41
CDH23-212ENST00000616684 EPM2AB3EWF7 344 aa12.5□□□□□ -0.41
CDH23-212ENST00000616684 A0A0C4DFX4 3053 aa12.5□□□□□ -0.41
CDH23-212ENST00000616684 AKAP13Q12802 2813 aa12.49□□□□□ -0.41
CDH23-212ENST00000616684 CHTF8P0CG12 524 aa12.48□□□□□ -0.41
CDH23-212ENST00000616684 LAMA3Q16787 3333 aa12.47□□□□□ -0.41
CDH23-212ENST00000616684 IGKV2D-30A0A075B6S6 120 aa12.45□□□□□ -0.42
CDH23-212ENST00000616684 IGKV2-30P06310 120 aa12.45□□□□□ -0.42
CDH23-212ENST00000616684 TM2D3Q9BRN9 247 aa12.45□□□□□ -0.42
CDH23-212ENST00000616684 TP53AIP1Q9HCN2 124 aa12.45□□□□□ -0.42
CDH23-212ENST00000616684 PRR34Q9NV39 138 aa12.45□□□□□ -0.42
CDH23-212ENST00000616684 SPACA4Q8TDM5 124 aa12.45□□□□□ -0.42
CDH23-212ENST00000616684 FAM168BA1KXE4 195 aa12.44□□□□□ -0.42
CDH23-212ENST00000616684 RPS28P62857 69 aaKnown RBP12.44□□□□□ -0.42
CDH23-212ENST00000616684 RTL8CO15255 209 aa12.43□□□□□ -0.42
CDH23-212ENST00000616684 SERTAD4-AS1Q5TG53 156 aa12.43□□□□□ -0.42
CDH23-212ENST00000616684 LAMA2P24043 3122 aaKnown RBP12.43□□□□□ -0.42
CDH23-212ENST00000616684 MGAQ8IWI9 3026 aa12.43□□□□□ -0.42
CDH23-212ENST00000616684 TRANK1O15050 2925 aa12.42□□□□□ -0.42
CDH23-212ENST00000616684 MKI67P46013 3256 aaKnown RBP12.41□□□□□ -0.42
CDH23-212ENST00000616684 LINC00612Q8N6U2 182 aa12.4□□□□□ -0.42
CDH23-212ENST00000616684 LINC00528Q8N1L1 170 aa12.4□□□□□ -0.42
CDH23-212ENST00000616684 KRTAP10-3P60369 221 aa12.39□□□□□ -0.43
CDH23-212ENST00000616684 KCNQ1DNQ9H478 68 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms