RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 IGLV5-45A0A087WSX0 123 aa8.66□□□□□ -1.02
CCL4-201ENST00000613947 FAM236AA0A1B0GUQ0 79 aa8.66□□□□□ -1.02
CCL4-201ENST00000613947 FAM236BA0A1B0GV22 79 aa8.66□□□□□ -1.02
CCL4-201ENST00000613947 CIRBPQ14011 172 aaKnown RBP8.66□□□□□ -1.02
CCL4-201ENST00000613947 RPS28P62857 69 aaKnown RBP8.65□□□□□ -1.02
CCL4-201ENST00000613947 PKHD1P08F94 4074 aa8.64□□□□□ -1.03
CCL4-201ENST00000613947 C9orf153Q5TBE3 101 aa8.64□□□□□ -1.03
CCL4-201ENST00000613947 TRAV8-3A0A0A6YYJ7 113 aa8.63□□□□□ -1.03
CCL4-201ENST00000613947 IBA57-AS1B1ANH7 110 aa8.63□□□□□ -1.03
CCL4-201ENST00000613947 INAFM2P0DMQ5 153 aa8.63□□□□□ -1.03
CCL4-201ENST00000613947 CRYGAP11844 174 aa8.62□□□□□ -1.03
CCL4-201ENST00000613947 COX7CP15954 63 aa8.62□□□□□ -1.03
CCL4-201ENST00000613947 HIST1H4AP62805 103 aaKnown RBP8.62□□□□□ -1.03
CCL4-201ENST00000613947 LINC00336Q6ZUF6 198 aa8.62□□□□□ -1.03
CCL4-201ENST00000613947 UBE2D4Q9Y2X8 147 aa8.62□□□□□ -1.03
CCL4-201ENST00000613947 Q6ZRN7 208 aaPredicted RBP8.61□□□□□ -1.03
CCL4-201ENST00000613947 FAM19A3Q7Z5A8 133 aa8.61□□□□□ -1.03
CCL4-201ENST00000613947 LINC00308Q8TCZ7 52 aa8.61□□□□□ -1.03
CCL4-201ENST00000613947 TMEM243Q9BU79 118 aa8.61□□□□□ -1.03
CCL4-201ENST00000613947 CHCHD7Q9BUK0 85 aa8.61□□□□□ -1.03
CCL4-201ENST00000613947 KLK12Q9UKR0 248 aa8.61□□□□□ -1.03
CCL4-201ENST00000613947 J3KT08 172 aa8.61□□□□□ -1.03
CCL4-201ENST00000613947 Q9HAA7 133 aa8.61□□□□□ -1.03
CCL4-201ENST00000613947 IGLV5-39A0A0G2JS06 123 aa8.6□□□□□ -1.03
CCL4-201ENST00000613947 ATOX1O00244 68 aa8.6□□□□□ -1.03
CCL4-201ENST00000613947 TNP2Q05952 138 aa8.6□□□□□ -1.03
CCL4-201ENST00000613947 SMCR5Q8TEV8 140 aa8.6□□□□□ -1.03
CCL4-201ENST00000613947 C5orf47Q569G3 176 aa8.59□□□□□ -1.03
CCL4-201ENST00000613947 UBE2L6O14933 153 aa8.58□□□□□ -1.04
CCL4-201ENST00000613947 HERVK_113P63121 156 aa8.58□□□□□ -1.04
CCL4-201ENST00000613947 C2orf48Q96LS8 159 aa8.58□□□□□ -1.04
CCL4-201ENST00000613947 DNAH5Q8TE73 4624 aa8.58□□□□□ -1.04
CCL4-201ENST00000613947 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.58□□□□□ -1.04
CCL4-201ENST00000613947 IGKV2-29A2NJV5 120 aaPredicted RBP8.58□□□□□ -1.04
CCL4-201ENST00000613947 ANGP03950 147 aaKnown RBP8.58□□□□□ -1.04
CCL4-201ENST00000613947 CSDC2Q9Y534 153 aaKnown RBP8.58□□□□□ -1.04
CCL4-201ENST00000613947 A0A1B0GUV1 79 aa8.57□□□□□ -1.04
CCL4-201ENST00000613947 BAALC-AS2P0C853 105 aa8.57□□□□□ -1.04
CCL4-201ENST00000613947 IGLV4-60A0A075B6I1 120 aa8.56□□□□□ -1.04
CCL4-201ENST00000613947 ENHOQ6UWT2 76 aa8.56□□□□□ -1.04
CCL4-201ENST00000613947 A0A1B0GVY2 172 aa8.56□□□□□ -1.04
CCL4-201ENST00000613947 LINC00269Q8N2A0 174 aa8.56□□□□□ -1.04
CCL4-201ENST00000613947 C22orf24Q9Y442 160 aa8.56□□□□□ -1.04
CCL4-201ENST00000613947 GAGE2AQ6NT46 116 aa8.55□□□□□ -1.04
CCL4-201ENST00000613947 CDKN2A-AS1Q9UH64 79 aa8.55□□□□□ -1.04
CCL4-201ENST00000613947 RPL28P46779 137 aaKnown RBP8.54□□□□□ -1.04
CCL4-201ENST00000613947 NPC2P61916 151 aa8.54□□□□□ -1.04
CCL4-201ENST00000613947 CLPSL2Q6UWE3 100 aa8.54□□□□□ -1.04
CCL4-201ENST00000613947 PRR34Q9NV39 138 aa8.54□□□□□ -1.04
CCL4-201ENST00000613947 DYNC1H1Q14204 4646 aaKnown RBP8.54□□□□□ -1.04
CCL4-201ENST00000613947 TRAV13-2A0A0B4J235 113 aa8.53□□□□□ -1.04
CCL4-201ENST00000613947 PSCAO43653 123 aa8.53□□□□□ -1.04
CCL4-201ENST00000613947 CRPP02741 224 aa8.53□□□□□ -1.04
CCL4-201ENST00000613947 OR13C6PQ8NH95 151 aa8.53□□□□□ -1.04
CCL4-201ENST00000613947 LRP1BQ9NZR2 4599 aa8.53□□□□□ -1.04
CCL4-201ENST00000613947 IGKV2D-24A0A075B6R9 120 aa8.53□□□□□ -1.04
CCL4-201ENST00000613947 TMEM258P61165 79 aa8.53□□□□□ -1.04
CCL4-201ENST00000613947 REG3AQ06141 175 aa8.53□□□□□ -1.04
CCL4-201ENST00000613947 Q6JHZ5 121 aa8.53□□□□□ -1.04
CCL4-201ENST00000613947 ZNF625Q96I27 306 aaPredicted RBP8.53□□□□□ -1.04
CCL4-201ENST00000613947 BIRC6Q9NR09 4857 aa8.52□□□□□ -1.05
CCL4-201ENST00000613947 MALP21145 153 aa8.52□□□□□ -1.05
CCL4-201ENST00000613947 RPL18AQ02543 176 aaKnown RBP8.52□□□□□ -1.05
CCL4-201ENST00000613947 OBSCN-AS1Q96MR7 158 aa8.52□□□□□ -1.05
CCL4-201ENST00000613947 A0A087WTM6 91 aa8.51□□□□□ -1.05
CCL4-201ENST00000613947 SOSTDC1Q6X4U4 206 aa8.51□□□□□ -1.05
CCL4-201ENST00000613947 RMI2Q96E14 147 aa8.51□□□□□ -1.05
CCL4-201ENST00000613947 LRCOL1A6NCL2 159 aa8.5□□□□□ -1.05
CCL4-201ENST00000613947 RNASE13Q5GAN3 156 aaKnown RBP8.5□□□□□ -1.05
CCL4-201ENST00000613947 C1orf43Q9BWL3 253 aa8.5□□□□□ -1.05
CCL4-201ENST00000613947 SMIM1B2RUZ4 78 aa8.5□□□□□ -1.05
CCL4-201ENST00000613947 H0YGX0 51 aa8.5□□□□□ -1.05
CCL4-201ENST00000613947 LINC00242Q5T6M2 205 aa8.5□□□□□ -1.05
CCL4-201ENST00000613947 FAM19A5Q7Z5A7 132 aaPredicted RBP8.5□□□□□ -1.05
CCL4-201ENST00000613947 IGLV10-54A0A075B6I4 117 aa8.49□□□□□ -1.05
CCL4-201ENST00000613947 IGKV3OR2-268A0A0C4DH90 116 aa8.49□□□□□ -1.05
CCL4-201ENST00000613947 DGAT2L7PQ6IED9 249 aa8.49□□□□□ -1.05
CCL4-201ENST00000613947 SERP2Q8N6R1 65 aa8.49□□□□□ -1.05
CCL4-201ENST00000613947 CDC42SE2Q9NRR3 84 aa8.49□□□□□ -1.05
CCL4-201ENST00000613947 LECT2O14960 151 aa8.48□□□□□ -1.05
CCL4-201ENST00000613947 KRTAP10-2P60368 255 aa8.48□□□□□ -1.05
CCL4-201ENST00000613947 COX6A2Q02221 97 aa8.48□□□□□ -1.05
CCL4-201ENST00000613947 KRTAP26-1Q6PEX3 210 aa8.48□□□□□ -1.05
CCL4-201ENST00000613947 FAM218AQ96MZ4 157 aa8.48□□□□□ -1.05
CCL4-201ENST00000613947 LOC107984640A0A0U1RRK4 108 aa8.46□□□□□ -1.05
CCL4-201ENST00000613947 DNAL4O96015 105 aa8.46□□□□□ -1.05
CCL4-201ENST00000613947 FUSP35637 526 aaKnown RBP eCLIP8.46□□□□□ -1.05
CCL4-201ENST00000613947 NDUFC2-KCTD14E9PQ53 114 aa8.45□□□□□ -1.06
CCL4-201ENST00000613947 Q8N814 137 aa8.45□□□□□ -1.06
CCL4-201ENST00000613947 hADV29S1A0JD25 119 aa8.44□□□□□ -1.06
CCL4-201ENST00000613947 S100A7L2Q5SY68 101 aa8.44□□□□□ -1.06
CCL4-201ENST00000613947 DPH3Q96FX2 82 aa8.44□□□□□ -1.06
CCL4-201ENST00000613947 LINC00959A0A1B0GUT2 108 aa8.43□□□□□ -1.06
CCL4-201ENST00000613947 ATP5EP2Q5VTU8 51 aa8.43□□□□□ -1.06
CCL4-201ENST00000613947 CHCHD10Q8WYQ3 142 aaPredicted RBP8.43□□□□□ -1.06
CCL4-201ENST00000613947 KIAA1109Q2LD37 5005 aa8.42□□□□□ -1.06
CCL4-201ENST00000613947 C16orf90A8MZG2 172 aa8.42□□□□□ -1.06
CCL4-201ENST00000613947 XCL1P47992 114 aa8.42□□□□□ -1.06
CCL4-201ENST00000613947 APOBP04114 4563 aaKnown RBP8.41□□□□□ -1.06
CCL4-201ENST00000613947 TRAV13-1A0A0B4J241 112 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms