RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 CHD6Q8TD26 2715 aa3.57□□□□□ -1.84
CCL16-206ENST00000613642 CHD8Q9HCK8 2581 aa3.57□□□□□ -1.84
CCL16-206ENST00000613642 FAM208BQ5VWN6 2430 aa3.56□□□□□ -1.84
CCL16-206ENST00000613642 IGLV7-46A0A075B6I9 117 aa3.56□□□□□ -1.84
CCL16-206ENST00000613642 IGHV4-30-2A0A087WSY4 118 aa3.56□□□□□ -1.84
CCL16-206ENST00000613642 A6NDX4 124 aa3.56□□□□□ -1.84
CCL16-206ENST00000613642 P0C880 135 aa3.56□□□□□ -1.84
CCL16-206ENST00000613642 CCL18P55774 89 aa3.56□□□□□ -1.84
CCL16-206ENST00000613642 WT1-ASQ06250 92 aa3.56□□□□□ -1.84
CCL16-206ENST00000613642 RPL39P5Q59GN2 51 aa3.56□□□□□ -1.84
CCL16-206ENST00000613642 Q8N9W7 124 aa3.56□□□□□ -1.84
CCL16-206ENST00000613642 LINC01006Q8NI28 216 aa3.56□□□□□ -1.84
CCL16-206ENST00000613642 OTOGLQ3ZCN5 2332 aa3.56□□□□□ -1.84
CCL16-206ENST00000613642 CACNA1IQ9P0X4 2223 aa3.56□□□□□ -1.84
CCL16-206ENST00000613642 USP24Q9UPU5 2620 aa3.55□□□□□ -1.84
CCL16-206ENST00000613642 IGLV11-55A0A075B6I3 123 aa3.55□□□□□ -1.84
CCL16-206ENST00000613642 H0YGG7 62 aa3.55□□□□□ -1.84
CCL16-206ENST00000613642 SUMO4Q6EEV6 95 aa3.55□□□□□ -1.84
CCL16-206ENST00000613642 SPRR4Q96PI1 79 aa3.55□□□□□ -1.84
CCL16-206ENST00000613642 CEP250Q9BV73 2442 aa3.55□□□□□ -1.84
CCL16-206ENST00000613642 SPEGQ15772 3267 aa3.55□□□□□ -1.84
CCL16-206ENST00000613642 IGKV3D-11A0A0A0MRZ8 115 aa3.54□□□□□ -1.84
CCL16-206ENST00000613642 NUPR2A6NF83 97 aa3.54□□□□□ -1.84
CCL16-206ENST00000613642 ODF3BA8MYP8 253 aa3.54□□□□□ -1.84
CCL16-206ENST00000613642 MRPL33O75394 65 aaKnown RBP3.54□□□□□ -1.84
CCL16-206ENST00000613642 PROK1P58294 105 aa3.54□□□□□ -1.84
CCL16-206ENST00000613642 LINC00158P58513 81 aa3.54□□□□□ -1.84
CCL16-206ENST00000613642 LINC00315P59091 139 aa3.54□□□□□ -1.84
CCL16-206ENST00000613642 DEFB113Q30KQ7 82 aa3.54□□□□□ -1.84
CCL16-206ENST00000613642 LINC00575Q6W349 94 aa3.54□□□□□ -1.84
CCL16-206ENST00000613642 KRTAP1-5Q9BYS1 174 aa3.54□□□□□ -1.84
CCL16-206ENST00000613642 DEFB126Q9BYW3 111 aa3.54□□□□□ -1.84
CCL16-206ENST00000613642 WDFY3Q8IZQ1 3526 aa3.53□□□□□ -1.84
CCL16-206ENST00000613642 DEFB108AA8MXU0 73 aa3.53□□□□□ -1.84
CCL16-206ENST00000613642 IGKV3-20P01619 116 aa3.53□□□□□ -1.84
CCL16-206ENST00000613642 C9orf163Q8N9P6 203 aa3.53□□□□□ -1.84
CCL16-206ENST00000613642 LEAP2Q969E1 77 aa3.53□□□□□ -1.84
CCL16-206ENST00000613642 DHRS4-AS1Q9P1J3 65 aa3.53□□□□□ -1.84
CCL16-206ENST00000613642 CDKN2A-AS1Q9UH64 79 aa3.53□□□□□ -1.84
CCL16-206ENST00000613642 FRYQ5TBA9 3013 aa3.52□□□□□ -1.85
CCL16-206ENST00000613642 LINC00959A0A1B0GUT2 108 aa3.52□□□□□ -1.85
CCL16-206ENST00000613642 PRAC2D3DTV9 90 aa3.52□□□□□ -1.85
CCL16-206ENST00000613642 RNASE3P12724 160 aaKnown RBP3.52□□□□□ -1.85
CCL16-206ENST00000613642 C10orf25Q5T742 122 aa3.52□□□□□ -1.85
CCL16-206ENST00000613642 KRTAP26-1Q6PEX3 210 aa3.52□□□□□ -1.85
CCL16-206ENST00000613642 LINC00612Q8N6U2 182 aa3.52□□□□□ -1.85
CCL16-206ENST00000613642 ZGRF1Q86YA3 2104 aa3.52□□□□□ -1.85
CCL16-206ENST00000613642 DNAJC13O75165 2243 aa3.51□□□□□ -1.85
CCL16-206ENST00000613642 SPTBN2O15020 2390 aa3.51□□□□□ -1.85
CCL16-206ENST00000613642 A0A1B0GVX0 72 aa3.51□□□□□ -1.85
CCL16-206ENST00000613642 SMIM1B2RUZ4 78 aa3.51□□□□□ -1.85
CCL16-206ENST00000613642 ZNF861PO60384 105 aa3.51□□□□□ -1.85
CCL16-206ENST00000613642 CCL3L1P16619 93 aa3.51□□□□□ -1.85
CCL16-206ENST00000613642 Q6ZQY7 126 aa3.51□□□□□ -1.85
CCL16-206ENST00000613642 ANKRD11Q6UB99 2663 aaPredicted RBP3.51□□□□□ -1.85
CCL16-206ENST00000613642 ZZEF1O43149 2961 aa3.51□□□□□ -1.85
CCL16-206ENST00000613642 NBEAQ8NFP9 2946 aa3.5□□□□□ -1.85
CCL16-206ENST00000613642 GPR179Q6PRD1 2367 aa3.5□□□□□ -1.85
CCL16-206ENST00000613642 I3L2K1 104 aa3.5□□□□□ -1.85
CCL16-206ENST00000613642 M0QY20 66 aa3.5□□□□□ -1.85
CCL16-206ENST00000613642 M0R2N4 97 aa3.5□□□□□ -1.85
CCL16-206ENST00000613642 ST20-AS1Q8NBB2 130 aa3.5□□□□□ -1.85
CCL16-206ENST00000613642 FASNP49327 2511 aaKnown RBP3.5□□□□□ -1.85
CCL16-206ENST00000613642 LOC400499M0QZD8 3231 aa3.5□□□□□ -1.85
CCL16-206ENST00000613642 KNTC1P50748 2209 aa3.5□□□□□ -1.85
CCL16-206ENST00000613642 CACNA1DQ01668 2161 aa3.49□□□□□ -1.85
CCL16-206ENST00000613642 DOCK10Q96BY6 2186 aa3.49□□□□□ -1.85
CCL16-206ENST00000613642 IGKV3-7A0A075B6H7 116 aa3.49□□□□□ -1.85
CCL16-206ENST00000613642 DEFB131BA0A096LNP1 70 aa3.49□□□□□ -1.85
CCL16-206ENST00000613642 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.49□□□□□ -1.85
CCL16-206ENST00000613642 CIRBP-AS1Q8TBR5 109 aa3.49□□□□□ -1.85
CCL16-206ENST00000613642 CR1P17927 2039 aa3.49□□□□□ -1.85
CCL16-206ENST00000613642 SETXQ7Z333 2677 aaKnown RBP3.48□□□□□ -1.85
CCL16-206ENST00000613642 UNC13CQ8NB66 2214 aa3.48□□□□□ -1.85
CCL16-206ENST00000613642 LAMA1P25391 3075 aa3.48□□□□□ -1.85
CCL16-206ENST00000613642 DMXL2Q8TDJ6 3036 aa3.48□□□□□ -1.85
CCL16-206ENST00000613642 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
CCL16-206ENST00000613642 PRB2P02812 416 aaPredicted RBP3.48□□□□□ -1.85
CCL16-206ENST00000613642 PRB1P04280 392 aa3.48□□□□□ -1.85
CCL16-206ENST00000613642 TLX1NBP0CAT3 122 aa3.48□□□□□ -1.85
CCL16-206ENST00000613642 DEFB124Q8NES8 71 aa3.48□□□□□ -1.85
CCL16-206ENST00000613642 ASH1LQ9NR48 2969 aaKnown RBP3.48□□□□□ -1.85
CCL16-206ENST00000613642 GCN1Q92616 2671 aaKnown RBP3.48□□□□□ -1.85
CCL16-206ENST00000613642 SPAG17Q6Q759 2223 aa3.48□□□□□ -1.85
CCL16-206ENST00000613642 ZNF407Q9C0G0 2248 aa3.48□□□□□ -1.85
CCL16-206ENST00000613642 A0A096LNT2 108 aa3.47□□□□□ -1.85
CCL16-206ENST00000613642 J3QKU1 62 aa3.47□□□□□ -1.85
CCL16-206ENST00000613642 PLA2G2AP14555 144 aa3.47□□□□□ -1.85
CCL16-206ENST00000613642 COX17Q14061 63 aa3.47□□□□□ -1.85
CCL16-206ENST00000613642 SPINK14Q6IE38 97 aa3.47□□□□□ -1.85
CCL16-206ENST00000613642 Q8N9L7 120 aa3.47□□□□□ -1.85
CCL16-206ENST00000613642 TNCP24821 2201 aa3.47□□□□□ -1.85
CCL16-206ENST00000613642 FREM2Q5SZK8 3169 aa3.46□□□□□ -1.86
CCL16-206ENST00000613642 A8MUU9 505 aa3.46□□□□□ -1.86
CCL16-206ENST00000613642 KRTAP10-7P60409 375 aaPredicted RBP3.46□□□□□ -1.86
CCL16-206ENST00000613642 PRB3Q04118 309 aaPredicted RBP3.46□□□□□ -1.86
CCL16-206ENST00000613642 Q5W150 140 aa3.46□□□□□ -1.86
CCL16-206ENST00000613642 CNOT1A5YKK6 2376 aaKnown RBP3.46□□□□□ -1.86
CCL16-206ENST00000613642 SMG1Q96Q15 3661 aaKnown RBP3.46□□□□□ -1.86
CCL16-206ENST00000613642 USF3Q68DE3 2245 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms