RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 ESM1Q9NQ30 184 aa7.53□□□□□ -1.2
PCDHGC3-202ENST00000611950 TRGV2A0A075B6R0 118 aa7.53□□□□□ -1.2
PCDHGC3-202ENST00000611950 LINC00308Q8TCZ7 52 aa7.52□□□□□ -1.21
PCDHGC3-202ENST00000611950 F8WEM9 126 aa7.52□□□□□ -1.21
PCDHGC3-202ENST00000611950 ZNF73O43830 326 aaPredicted RBP7.52□□□□□ -1.21
PCDHGC3-202ENST00000611950 RPL36AP83881 106 aaKnown RBP7.52□□□□□ -1.21
PCDHGC3-202ENST00000611950 RPL36ALQ969Q0 106 aaKnown RBP7.52□□□□□ -1.21
PCDHGC3-202ENST00000611950 SMIM1B2RUZ4 78 aa7.51□□□□□ -1.21
PCDHGC3-202ENST00000611950 TRAV13-2A0A0B4J235 113 aa7.51□□□□□ -1.21
PCDHGC3-202ENST00000611950 K7EQD1 137 aa7.51□□□□□ -1.21
PCDHGC3-202ENST00000611950 TMEM256-PLSCR3K7ERE1 68 aa7.51□□□□□ -1.21
PCDHGC3-202ENST00000611950 UBE2L6O14933 153 aa7.51□□□□□ -1.21
PCDHGC3-202ENST00000611950 NDUFA1O15239 70 aa7.51□□□□□ -1.21
PCDHGC3-202ENST00000611950 NDUFS5O43920 106 aa7.5□□□□□ -1.21
PCDHGC3-202ENST00000611950 A0A096LPF7 62 aa7.5□□□□□ -1.21
PCDHGC3-202ENST00000611950 CLPSL2Q6UWE3 100 aa7.49□□□□□ -1.21
PCDHGC3-202ENST00000611950 Q9HAA7 133 aa7.49□□□□□ -1.21
PCDHGC3-202ENST00000611950 A0A0A0MQY5 61 aa7.48□□□□□ -1.21
PCDHGC3-202ENST00000611950 A0A087WZ39 114 aa7.48□□□□□ -1.21
PCDHGC3-202ENST00000611950 DEFB130BP0DP73 79 aa7.48□□□□□ -1.21
PCDHGC3-202ENST00000611950 DEFB130AP0DP74 79 aa7.48□□□□□ -1.21
PCDHGC3-202ENST00000611950 FAM222AQ5U5X8 452 aa7.48□□□□□ -1.21
PCDHGC3-202ENST00000611950 TRGV4A0A0C4DH28 118 aa7.47□□□□□ -1.21
PCDHGC3-202ENST00000611950 CDC42SE2Q9NRR3 84 aa7.47□□□□□ -1.21
PCDHGC3-202ENST00000611950 IGLV4-60A0A075B6I1 120 aa7.47□□□□□ -1.21
PCDHGC3-202ENST00000611950 NDUFC1O43677 76 aa7.47□□□□□ -1.21
PCDHGC3-202ENST00000611950 Q6ZVQ6 151 aa7.47□□□□□ -1.21
PCDHGC3-202ENST00000611950 RMI2Q96E14 147 aa7.47□□□□□ -1.21
PCDHGC3-202ENST00000611950 FAM218AQ96MZ4 157 aa7.47□□□□□ -1.21
PCDHGC3-202ENST00000611950 RPL28P46779 137 aaKnown RBP7.46□□□□□ -1.21
PCDHGC3-202ENST00000611950 ESRGQ1W209 222 aa7.46□□□□□ -1.21
PCDHGC3-202ENST00000611950 NOTCH1P46531 2555 aa7.46□□□□□ -1.21
PCDHGC3-202ENST00000611950 TRAV7A0A075B6U4 112 aa7.46□□□□□ -1.22
PCDHGC3-202ENST00000611950 IGLV5-45A0A087WSX0 123 aa7.46□□□□□ -1.22
PCDHGC3-202ENST00000611950 IGLV5-39A0A0G2JS06 123 aa7.46□□□□□ -1.22
PCDHGC3-202ENST00000611950 A8MUN3 132 aa7.46□□□□□ -1.22
PCDHGC3-202ENST00000611950 GIG44P09565 113 aaPredicted RBP7.46□□□□□ -1.22
PCDHGC3-202ENST00000611950 MIR7-3HGQ8N6C7 128 aa7.46□□□□□ -1.22
PCDHGC3-202ENST00000611950 PHF5AQ7RTV0 110 aaKnown RBP7.46□□□□□ -1.22
PCDHGC3-202ENST00000611950 TRRAPQ9Y4A5 3859 aa7.45□□□□□ -1.22
PCDHGC3-202ENST00000611950 LINC00158P58513 81 aa7.45□□□□□ -1.22
PCDHGC3-202ENST00000611950 FAM19A3Q7Z5A8 133 aa7.45□□□□□ -1.22
PCDHGC3-202ENST00000611950 LINC01006Q8NI28 216 aa7.45□□□□□ -1.22
PCDHGC3-202ENST00000611950 TRAV23DV6A0A075B6W5 121 aa7.45□□□□□ -1.22
PCDHGC3-202ENST00000611950 BCE1O60756 84 aa7.44□□□□□ -1.22
PCDHGC3-202ENST00000611950 SNURFQ9Y675 71 aa7.44□□□□□ -1.22
PCDHGC3-202ENST00000611950 LYRM9A8MSI8 78 aa7.43□□□□□ -1.22
PCDHGC3-202ENST00000611950 OVOL2Q9BRP0 275 aa7.43□□□□□ -1.22
PCDHGC3-202ENST00000611950 COX7A2LO14548 114 aa7.43□□□□□ -1.22
PCDHGC3-202ENST00000611950 DEFB4AO15263 64 aa7.43□□□□□ -1.22
PCDHGC3-202ENST00000611950 C22orf24Q9Y442 160 aa7.43□□□□□ -1.22
PCDHGC3-202ENST00000611950 Q1T7F1 81 aa7.42□□□□□ -1.22
PCDHGC3-202ENST00000611950 LINC00337Q8N6G1 96 aa7.42□□□□□ -1.22
PCDHGC3-202ENST00000611950 LINC00846Q9NV44 126 aa7.42□□□□□ -1.22
PCDHGC3-202ENST00000611950 BAALC-AS2P0C853 105 aa7.42□□□□□ -1.22
PCDHGC3-202ENST00000611950 C19orf73Q9NVV2 129 aa7.42□□□□□ -1.22
PCDHGC3-202ENST00000611950 TRBV10-1A0A0K0K1A3 114 aa7.41□□□□□ -1.22
PCDHGC3-202ENST00000611950 LCA10Q71F78 164 aa7.41□□□□□ -1.22
PCDHGC3-202ENST00000611950 COX7B2Q8TF08 81 aa7.41□□□□□ -1.22
PCDHGC3-202ENST00000611950 SND1-IT1Q9HBX3 110 aa7.41□□□□□ -1.22
PCDHGC3-202ENST00000611950 CRPP02741 224 aa7.41□□□□□ -1.22
PCDHGC3-202ENST00000611950 RNASE1P07998 156 aaKnown RBP7.41□□□□□ -1.22
PCDHGC3-202ENST00000611950 C9orf129Q5T035 196 aaKnown RBP7.41□□□□□ -1.22
PCDHGC3-202ENST00000611950 IGLV1-51P01701 117 aa7.4□□□□□ -1.22
PCDHGC3-202ENST00000611950 SLPIP03973 132 aa7.4□□□□□ -1.22
PCDHGC3-202ENST00000611950 Q8N3U1 123 aa7.4□□□□□ -1.22
PCDHGC3-202ENST00000611950 UBE2BP63146 152 aa7.4□□□□□ -1.23
PCDHGC3-202ENST00000611950 IGLV10-54A0A075B6I4 117 aa7.39□□□□□ -1.23
PCDHGC3-202ENST00000611950 IGKV2-28A0A075B6P5 120 aa7.39□□□□□ -1.23
PCDHGC3-202ENST00000611950 A0A087WYN8 130 aa7.39□□□□□ -1.23
PCDHGC3-202ENST00000611950 IGKV2D-28P01615 120 aa7.39□□□□□ -1.23
PCDHGC3-202ENST00000611950 MIFP14174 115 aa7.39□□□□□ -1.23
PCDHGC3-202ENST00000611950 DNAL4O96015 105 aa7.39□□□□□ -1.23
PCDHGC3-202ENST00000611950 PRR3P79522 188 aaKnown RBP7.39□□□□□ -1.23
PCDHGC3-202ENST00000611950 CSNK1G2-AS1Q8NCQ2 148 aa7.39□□□□□ -1.23
PCDHGC3-202ENST00000611950 C16orf74Q96GX8 76 aa7.39□□□□□ -1.23
PCDHGC3-202ENST00000611950 TRBV6-8A0A0A6YYG3 113 aa7.38□□□□□ -1.23
PCDHGC3-202ENST00000611950 A8MU10 97 aa7.38□□□□□ -1.23
PCDHGC3-202ENST00000611950 FUSP35637 526 aaKnown RBP eCLIP7.38□□□□□ -1.23
PCDHGC3-202ENST00000611950 CCL18P55774 89 aa7.38□□□□□ -1.23
PCDHGC3-202ENST00000611950 SMIM11BQ8TCY0 68 aa7.37□□□□□ -1.23
PCDHGC3-202ENST00000611950 GYPEP15421 78 aa7.37□□□□□ -1.23
PCDHGC3-202ENST00000611950 Q6ZRP5 223 aa7.37□□□□□ -1.23
PCDHGC3-202ENST00000611950 C14orf132Q9NPU4 83 aa7.37□□□□□ -1.23
PCDHGC3-202ENST00000611950 LECT2O14960 151 aa7.36□□□□□ -1.23
PCDHGC3-202ENST00000611950 IGHV3OR16-9A0A0B4J2B5 98 aa7.35□□□□□ -1.23
PCDHGC3-202ENST00000611950 CMC4P56277 68 aaPredicted RBP7.35□□□□□ -1.23
PCDHGC3-202ENST00000611950 DIRC1Q969H9 104 aa7.35□□□□□ -1.23
PCDHGC3-202ENST00000611950 TRBV6-4A0A1B0GX49 114 aa7.35□□□□□ -1.23
PCDHGC3-202ENST00000611950 A6NN06 94 aa7.35□□□□□ -1.23
PCDHGC3-202ENST00000611950 SYCNQ0VAF6 134 aa7.35□□□□□ -1.23
PCDHGC3-202ENST00000611950 ATP5EP2Q5VTU8 51 aa7.35□□□□□ -1.23
PCDHGC3-202ENST00000611950 C9orf116Q5BN46 136 aaPredicted RBP7.34□□□□□ -1.23
PCDHGC3-202ENST00000611950 KRTAP10-3P60369 221 aa7.34□□□□□ -1.23
PCDHGC3-202ENST00000611950 C7orf65Q6ZTY9 151 aa7.34□□□□□ -1.23
PCDHGC3-202ENST00000611950 WFDC9Q8NEX5 89 aa7.34□□□□□ -1.23
PCDHGC3-202ENST00000611950 LINC00959A0A1B0GUT2 108 aa7.33□□□□□ -1.24
PCDHGC3-202ENST00000611950 NCR3O14931 201 aa7.33□□□□□ -1.24
PCDHGC3-202ENST00000611950 TRBV10-3A0A0K0K1G6 114 aa7.33□□□□□ -1.24
PCDHGC3-202ENST00000611950 PSPHP1O15172 72 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms