RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 SHPRHQ149N8 1683 aa-0.72□□□□□ -2.53
SNORA28-201ENST00000606769 USH2AO75445 5202 aa-0.73□□□□□ -2.53
SNORA28-201ENST00000606769 I3L3M4 83 aa-0.73□□□□□ -2.53
SNORA28-201ENST00000606769 AKAP13Q12802 2813 aa-0.73□□□□□ -2.53
SNORA28-201ENST00000606769 LRRC37AA6NMS7 1700 aa-0.73□□□□□ -2.53
SNORA28-201ENST00000606769 MLH3Q9UHC1 1453 aa-0.73□□□□□ -2.53
SNORA28-201ENST00000606769 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.73□□□□□ -2.53
SNORA28-201ENST00000606769 KNL1Q8NG31 2342 aa-0.73□□□□□ -2.53
SNORA28-201ENST00000606769 ANKRD36A6QL64 1941 aa-0.74□□□□□ -2.53
SNORA28-201ENST00000606769 NBASA2RRP1 2371 aa-0.74□□□□□ -2.53
SNORA28-201ENST00000606769 H3BQF6 201 aa-0.74□□□□□ -2.53
SNORA28-201ENST00000606769 KRTDAPP60985 99 aa-0.74□□□□□ -2.53
SNORA28-201ENST00000606769 SPRR2FQ96RM1 72 aa-0.74□□□□□ -2.53
SNORA28-201ENST00000606769 CCDC141Q6ZP82 1450 aa-0.74□□□□□ -2.53
SNORA28-201ENST00000606769 FAT3Q8TDW7 4589 aa-0.74□□□□□ -2.53
SNORA28-201ENST00000606769 SAMD9Q5K651 1589 aa-0.74□□□□□ -2.53
SNORA28-201ENST00000606769 MT-ATP8P03928 68 aa-0.75□□□□□ -2.53
SNORA28-201ENST00000606769 ARMS2P0C7Q2 107 aa-0.75□□□□□ -2.53
SNORA28-201ENST00000606769 PSMG4Q5JS54 123 aa-0.75□□□□□ -2.53
SNORA28-201ENST00000606769 TMEM203Q969S6 136 aa-0.75□□□□□ -2.53
SNORA28-201ENST00000606769 TRGV9Q99603 122 aa-0.75□□□□□ -2.53
SNORA28-201ENST00000606769 MON2Q7Z3U7 1717 aa-0.75□□□□□ -2.53
SNORA28-201ENST00000606769 HERC2O95714 4834 aa-0.76□□□□□ -2.53
SNORA28-201ENST00000606769 DNAH9Q9NYC9 4486 aa-0.76□□□□□ -2.53
SNORA28-201ENST00000606769 TNRC18O15417 2968 aaPredicted RBP-0.76□□□□□ -2.53
SNORA28-201ENST00000606769 UBR4Q5T4S7 5183 aa-0.76□□□□□ -2.53
SNORA28-201ENST00000606769 GNGT2O14610 69 aa-0.76□□□□□ -2.53
SNORA28-201ENST00000606769 WFDC13Q8IUB5 93 aa-0.76□□□□□ -2.53
SNORA28-201ENST00000606769 ANKRD36BQ8N2N9 1353 aa-0.76□□□□□ -2.53
SNORA28-201ENST00000606769 NBPF19A0A087WUL8 3843 aa-0.77□□□□□ -2.53
SNORA28-201ENST00000606769 C5P01031 1676 aa-0.77□□□□□ -2.53
SNORA28-201ENST00000606769 CICQ96RK0 1608 aaPredicted RBP-0.77□□□□□ -2.53
SNORA28-201ENST00000606769 FAM135AQ9P2D6 1515 aa-0.77□□□□□ -2.53
SNORA28-201ENST00000606769 TROQ12816 1431 aaPredicted RBP-0.77□□□□□ -2.53
SNORA28-201ENST00000606769 MT1AP04731 61 aa-0.77□□□□□ -2.53
SNORA28-201ENST00000606769 GNGT1P63211 74 aa-0.77□□□□□ -2.53
SNORA28-201ENST00000606769 PMCHL1Q16048 86 aa-0.77□□□□□ -2.53
SNORA28-201ENST00000606769 GTF2H5Q6ZYL4 71 aa-0.77□□□□□ -2.53
SNORA28-201ENST00000606769 PSENENQ9NZ42 101 aa-0.77□□□□□ -2.53
SNORA28-201ENST00000606769 EPG5Q9HCE0 2579 aa-0.77□□□□□ -2.53
SNORA28-201ENST00000606769 MUC17Q685J3 4493 aa-0.78□□□□□ -2.53
SNORA28-201ENST00000606769 TRBV7-7A0A0K0K1E9 115 aa-0.78□□□□□ -2.53
SNORA28-201ENST00000606769 NDUFC1O43677 76 aa-0.78□□□□□ -2.53
SNORA28-201ENST00000606769 MRPS10P82664 201 aaKnown RBP-0.78□□□□□ -2.53
SNORA28-201ENST00000606769 VAMP8Q9BV40 100 aa-0.78□□□□□ -2.53
SNORA28-201ENST00000606769 VPS13DQ5THJ4 4388 aa-0.78□□□□□ -2.53
SNORA28-201ENST00000606769 PRRC2CQ9Y520 2896 aaKnown RBP-0.78□□□□□ -2.54
SNORA28-201ENST00000606769 RAPGEF2Q9Y4G8 1499 aa-0.79□□□□□ -2.54
SNORA28-201ENST00000606769 TACC2O95359 2948 aa-0.79□□□□□ -2.54
SNORA28-201ENST00000606769 SPTY2D1-AS1A0A0U1RR47 76 aa-0.79□□□□□ -2.54
SNORA28-201ENST00000606769 C20orf202A1L168 122 aa-0.79□□□□□ -2.54
SNORA28-201ENST00000606769 CCL22O00626 93 aa-0.79□□□□□ -2.54
SNORA28-201ENST00000606769 IGLC2P0DOY2 106 aa-0.79□□□□□ -2.54
SNORA28-201ENST00000606769 IGLC3P0DOY3 106 aa-0.79□□□□□ -2.54
SNORA28-201ENST00000606769 HEPN1Q6WQI6 88 aa-0.79□□□□□ -2.54
SNORA28-201ENST00000606769 SERP2Q8N6R1 65 aa-0.79□□□□□ -2.54
SNORA28-201ENST00000606769 LYSTQ99698 3801 aa-0.79□□□□□ -2.54
SNORA28-201ENST00000606769 PMCHL2Q9BQD1 86 aa-0.79□□□□□ -2.54
SNORA28-201ENST00000606769 HIGD1BQ9P298 99 aa-0.79□□□□□ -2.54
SNORA28-201ENST00000606769 CDKN2A-AS1Q9UH64 79 aa-0.79□□□□□ -2.54
SNORA28-201ENST00000606769 SPG11Q96JI7 2443 aa-0.79□□□□□ -2.54
SNORA28-201ENST00000606769 CUBNO60494 3623 aa-0.79□□□□□ -2.54
SNORA28-201ENST00000606769 CLIP1P30622 1438 aa-0.8□□□□□ -2.54
SNORA28-201ENST00000606769 COL14A1Q05707 1796 aaKnown RBP-0.8□□□□□ -2.54
SNORA28-201ENST00000606769 TRANK1O15050 2925 aa-0.8□□□□□ -2.54
SNORA28-201ENST00000606769 MPC2O95563 127 aa-0.8□□□□□ -2.54
SNORA28-201ENST00000606769 UQCRHP07919 91 aa-0.8□□□□□ -2.54
SNORA28-201ENST00000606769 C14orf144Q96I85 54 aa-0.8□□□□□ -2.54
SNORA28-201ENST00000606769 HECTD1Q9ULT8 2610 aa-0.8□□□□□ -2.54
SNORA28-201ENST00000606769 PKHD1L1Q86WI1 4243 aa-0.8□□□□□ -2.54
SNORA28-201ENST00000606769 MAGI2Q86UL8 1455 aa-0.8□□□□□ -2.54
SNORA28-201ENST00000606769 BCORQ6W2J9 1755 aa-0.81□□□□□ -2.54
SNORA28-201ENST00000606769 FASNP49327 2511 aaKnown RBP-0.81□□□□□ -2.54
SNORA28-201ENST00000606769 DNAH3Q8TD57 4116 aa-0.82□□□□□ -2.54
SNORA28-201ENST00000606769 HIVEP1P15822 2718 aa-0.82□□□□□ -2.54
SNORA28-201ENST00000606769 ABCC2Q92887 1545 aa-0.82□□□□□ -2.54
SNORA28-201ENST00000606769 TRAV30A0A087WSZ9 112 aa-0.82□□□□□ -2.54
SNORA28-201ENST00000606769 F8WEM9 126 aa-0.82□□□□□ -2.54
SNORA28-201ENST00000606769 QSER1Q2KHR3 1735 aa-0.82□□□□□ -2.54
SNORA28-201ENST00000606769 CRYBG1Q9Y4K1 1723 aa-0.82□□□□□ -2.54
SNORA28-201ENST00000606769 TEP1Q99973 2627 aaKnown RBP-0.82□□□□□ -2.54
SNORA28-201ENST00000606769 PREX1Q8TCU6 1659 aa-0.82□□□□□ -2.54
SNORA28-201ENST00000606769 ANK3Q12955 4377 aaKnown RBP-0.83□□□□□ -2.54
SNORA28-201ENST00000606769 HTTP42858 3142 aa-0.83□□□□□ -2.54
SNORA28-201ENST00000606769 TMEM218A2RU14 115 aa-0.83□□□□□ -2.54
SNORA28-201ENST00000606769 ATOX1O00244 68 aa-0.83□□□□□ -2.54
SNORA28-201ENST00000606769 S100A10P60903 97 aa-0.83□□□□□ -2.54
SNORA28-201ENST00000606769 SARNPP82979 210 aaKnown RBP-0.83□□□□□ -2.54
SNORA28-201ENST00000606769 UBE2D4Q9Y2X8 147 aa-0.83□□□□□ -2.54
SNORA28-201ENST00000606769 RGPD2P0DJD1 1756 aa-0.83□□□□□ -2.54
SNORA28-201ENST00000606769 RGPD1P0DJD0 1748 aa-0.84□□□□□ -2.54
SNORA28-201ENST00000606769 TEX14Q8IWB6 1497 aa-0.84□□□□□ -2.54
SNORA28-201ENST00000606769 PDE4DIPQ5VU43 2346 aa-0.84□□□□□ -2.54
SNORA28-201ENST00000606769 D6R8Y8 96 aa-0.84□□□□□ -2.54
SNORA28-201ENST00000606769 ATP6V1G2-DDX39BF2Z307 99 aa-0.84□□□□□ -2.54
SNORA28-201ENST00000606769 NDUFA3O95167 84 aa-0.84□□□□□ -2.54
SNORA28-201ENST00000606769 HMGN3Q15651 99 aa-0.84□□□□□ -2.54
SNORA28-201ENST00000606769 ETDBQ3ZM63 59 aa-0.84□□□□□ -2.54
SNORA28-201ENST00000606769 MUSTN1Q8IVN3 82 aa-0.84□□□□□ -2.54
SNORA28-201ENST00000606769 APOBP04114 4563 aaKnown RBP-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms