RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 Q6ZRP5 223 aa6.92□□□□□ -1.3
SCNM1-207ENST00000602841 MIR7-3HGQ8N6C7 128 aa6.92□□□□□ -1.3
SCNM1-207ENST00000602841 SNHG12Q9BXW3 62 aa6.92□□□□□ -1.3
SCNM1-207ENST00000602841 PPDPFQ9H3Y8 114 aa6.92□□□□□ -1.3
SCNM1-207ENST00000602841 DNAH8Q96JB1 4490 aa6.92□□□□□ -1.3
SCNM1-207ENST00000602841 SRRM2Q9UQ35 2752 aaKnown RBP6.91□□□□□ -1.3
SCNM1-207ENST00000602841 EREGO14944 169 aa6.91□□□□□ -1.3
SCNM1-207ENST00000602841 PFN2P35080 140 aa6.91□□□□□ -1.3
SCNM1-207ENST00000602841 KRTAP7-1Q8IUC3 87 aa6.91□□□□□ -1.3
SCNM1-207ENST00000602841 CEND1Q8N111 149 aa6.91□□□□□ -1.3
SCNM1-207ENST00000602841 HMCN2Q8NDA2 5059 aa6.91□□□□□ -1.3
SCNM1-207ENST00000602841 FUSP35637 526 aaKnown RBP eCLIP6.9□□□□□ -1.3
SCNM1-207ENST00000602841 HINT1P49773 126 aaPredicted RBP6.9□□□□□ -1.3
SCNM1-207ENST00000602841 SDIM1Q6ZPB5 146 aa6.9□□□□□ -1.3
SCNM1-207ENST00000602841 Q6ZVH6 145 aa6.9□□□□□ -1.3
SCNM1-207ENST00000602841 C9orf163Q8N9P6 203 aa6.9□□□□□ -1.3
SCNM1-207ENST00000602841 A0A1B0GWB2 263 aa6.89□□□□□ -1.31
SCNM1-207ENST00000602841 TMEM238C9JI98 176 aa6.89□□□□□ -1.31
SCNM1-207ENST00000602841 LINC00158P58513 81 aa6.89□□□□□ -1.31
SCNM1-207ENST00000602841 MEIG1Q5JSS6 88 aa6.89□□□□□ -1.31
SCNM1-207ENST00000602841 C9orf129Q5T035 196 aaKnown RBP6.89□□□□□ -1.31
SCNM1-207ENST00000602841 CARD19Q96LW7 228 aa6.89□□□□□ -1.31
SCNM1-207ENST00000602841 HIST1H4GQ99525 98 aa6.89□□□□□ -1.31
SCNM1-207ENST00000602841 SND1-IT1Q9HBX3 110 aa6.89□□□□□ -1.31
SCNM1-207ENST00000602841 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.88□□□□□ -1.31
SCNM1-207ENST00000602841 NDUFC2-KCTD14E9PQ53 114 aa6.88□□□□□ -1.31
SCNM1-207ENST00000602841 IFITM1P13164 125 aa6.88□□□□□ -1.31
SCNM1-207ENST00000602841 KRTAP10-2P60368 255 aa6.88□□□□□ -1.31
SCNM1-207ENST00000602841 NPC2P61916 151 aa6.88□□□□□ -1.31
SCNM1-207ENST00000602841 C14orf177Q52M58 125 aa6.88□□□□□ -1.31
SCNM1-207ENST00000602841 IGKV2-28A0A075B6P5 120 aa6.87□□□□□ -1.31
SCNM1-207ENST00000602841 A4D1N5 150 aa6.87□□□□□ -1.31
SCNM1-207ENST00000602841 PANO1I0J062 215 aa6.87□□□□□ -1.31
SCNM1-207ENST00000602841 IGKV2D-28P01615 120 aa6.87□□□□□ -1.31
SCNM1-207ENST00000602841 CFC1BP0CG36 223 aa6.87□□□□□ -1.31
SCNM1-207ENST00000602841 CFC1P0CG37 223 aa6.87□□□□□ -1.31
SCNM1-207ENST00000602841 SRSF9Q13242 221 aaKnown RBP eCLIP6.87□□□□□ -1.31
SCNM1-207ENST00000602841 CIRBPQ14011 172 aaKnown RBP6.87□□□□□ -1.31
SCNM1-207ENST00000602841 LINC00528Q8N1L1 170 aa6.87□□□□□ -1.31
SCNM1-207ENST00000602841 EPM2AB3EWF7 344 aa6.86□□□□□ -1.31
SCNM1-207ENST00000602841 GCSHP23434 173 aa6.86□□□□□ -1.31
SCNM1-207ENST00000602841 LINC01620Q4KN68 170 aa6.86□□□□□ -1.31
SCNM1-207ENST00000602841 A0A096LNI7 61 aa6.85□□□□□ -1.31
SCNM1-207ENST00000602841 M0R143 59 aa6.85□□□□□ -1.31
SCNM1-207ENST00000602841 PRR3P79522 188 aaKnown RBP6.85□□□□□ -1.31
SCNM1-207ENST00000602841 XAGE1AQ9HD64 81 aa6.85□□□□□ -1.31
SCNM1-207ENST00000602841 INAFM2P0DMQ5 153 aa6.84□□□□□ -1.31
SCNM1-207ENST00000602841 VPREB1P12018 145 aa6.84□□□□□ -1.31
SCNM1-207ENST00000602841 LOC107984640A0A0U1RRK4 108 aa6.83□□□□□ -1.32
SCNM1-207ENST00000602841 K7ERJ3 54 aa6.83□□□□□ -1.32
SCNM1-207ENST00000602841 NDUFC2O95298 119 aa6.83□□□□□ -1.32
SCNM1-207ENST00000602841 SERTAD4-AS1Q5TG53 156 aa6.83□□□□□ -1.32
SCNM1-207ENST00000602841 LINC00337Q8N6G1 96 aa6.83□□□□□ -1.32
SCNM1-207ENST00000602841 PLA2G2DQ9UNK4 145 aa6.83□□□□□ -1.32
SCNM1-207ENST00000602841 FAT1Q14517 4588 aa6.83□□□□□ -1.32
SCNM1-207ENST00000602841 A0A1W2PNN7 141 aa6.82□□□□□ -1.32
SCNM1-207ENST00000602841 FAM168BA1KXE4 195 aa6.82□□□□□ -1.32
SCNM1-207ENST00000602841 C16orf90A8MZG2 172 aa6.82□□□□□ -1.32
SCNM1-207ENST00000602841 TAX1BP3O14907 124 aa6.82□□□□□ -1.32
SCNM1-207ENST00000602841 GAGE2EQ4V326 116 aa6.82□□□□□ -1.32
SCNM1-207ENST00000602841 GAGE2DQ9UEU5 116 aa6.82□□□□□ -1.32
SCNM1-207ENST00000602841 IGLV5-37A0A075B6J1 123 aa6.81□□□□□ -1.32
SCNM1-207ENST00000602841 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.81□□□□□ -1.32
SCNM1-207ENST00000602841 A0A0B4J2C4 111 aa6.81□□□□□ -1.32
SCNM1-207ENST00000602841 CHTF8P0CG12 524 aa6.81□□□□□ -1.32
SCNM1-207ENST00000602841 RPL24P83731 157 aaKnown RBP6.81□□□□□ -1.32
SCNM1-207ENST00000602841 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.81□□□□□ -1.32
SCNM1-207ENST00000602841 NHP2Q9NX24 153 aaKnown RBP6.8□□□□□ -1.32
SCNM1-207ENST00000602841 KRTAP10-1P60331 282 aa6.79□□□□□ -1.32
SCNM1-207ENST00000602841 RPL18AQ02543 176 aaKnown RBP6.79□□□□□ -1.32
SCNM1-207ENST00000602841 GAGE2BQ13066 116 aa6.79□□□□□ -1.32
SCNM1-207ENST00000602841 BATFQ16520 125 aa6.79□□□□□ -1.32
SCNM1-207ENST00000602841 FAM30AQ9NZY2 134 aa6.79□□□□□ -1.32
SCNM1-207ENST00000602841 RNF213Q63HN8 5207 aa6.79□□□□□ -1.32
SCNM1-207ENST00000602841 IGLV5-52A0A0A0MRZ9 124 aa6.78□□□□□ -1.32
SCNM1-207ENST00000602841 KRTAP11-1Q8IUC1 163 aa6.78□□□□□ -1.32
SCNM1-207ENST00000602841 SPACA4Q8TDM5 124 aa6.78□□□□□ -1.32
SCNM1-207ENST00000602841 FLG2Q5D862 2391 aaPredicted RBP6.77□□□□□ -1.32
SCNM1-207ENST00000602841 TRBV10-2A0A0K0K1G8 114 aa6.77□□□□□ -1.33
SCNM1-207ENST00000602841 IGLV6-57P01721 117 aa6.77□□□□□ -1.33
SCNM1-207ENST00000602841 Q6ZSA8 131 aa6.77□□□□□ -1.33
SCNM1-207ENST00000602841 TSPAN13O95857 204 aa6.76□□□□□ -1.33
SCNM1-207ENST00000602841 C7orf33Q8WU49 177 aa6.76□□□□□ -1.33
SCNM1-207ENST00000602841 COPS9Q8WXC6 57 aa6.76□□□□□ -1.33
SCNM1-207ENST00000602841 PRO1854Q9UHT4 67 aa6.76□□□□□ -1.33
SCNM1-207ENST00000602841 C22orf24Q9Y442 160 aa6.76□□□□□ -1.33
SCNM1-207ENST00000602841 VPS13BQ7Z7G8 4022 aa6.76□□□□□ -1.33
SCNM1-207ENST00000602841 IGKV2-24A0A0C4DH68 120 aa6.75□□□□□ -1.33
SCNM1-207ENST00000602841 TMEM238LA0A1B0GVL6 79 aa6.75□□□□□ -1.33
SCNM1-207ENST00000602841 A6NDN8 102 aa6.75□□□□□ -1.33
SCNM1-207ENST00000602841 A6NJY4 79 aa6.75□□□□□ -1.33
SCNM1-207ENST00000602841 NCR3O14931 201 aa6.75□□□□□ -1.33
SCNM1-207ENST00000602841 COL5A1-AS1Q5SY13 56 aa6.75□□□□□ -1.33
SCNM1-207ENST00000602841 M0R378 163 aa6.74□□□□□ -1.33
SCNM1-207ENST00000602841 RAB37Q96AX2 223 aa6.74□□□□□ -1.33
SCNM1-207ENST00000602841 NAA38Q9BRA0 125 aaKnown RBP6.74□□□□□ -1.33
SCNM1-207ENST00000602841 PLAC8Q9NZF1 115 aa6.74□□□□□ -1.33
SCNM1-207ENST00000602841 IGLV1-50A0A075B6I6 118 aa6.73□□□□□ -1.33
SCNM1-207ENST00000602841 A0A087WYN8 130 aa6.73□□□□□ -1.33
SCNM1-207ENST00000602841 TRAV13-2A0A0B4J235 113 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms