RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 PRO0461Q9UI25 63 aa2.21□□□□□ -2.06
ZNF540-207ENST00000589285 A8MTW9 85 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 NDUFC2O95298 119 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 SMIM13P0DJ93 91 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 PFN2P35080 140 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 ZFP2Q6ZN57 461 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 C5orf38Q86SI9 138 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 KRTAP11-1Q8IUC1 163 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 LINC00269Q8N2A0 174 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 LINC00612Q8N6U2 182 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 CHCHD1Q96BP2 118 aaKnown RBP2.2□□□□□ -2.06
ZNF540-207ENST00000589285 DNAH7Q8WXX0 4024 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.2□□□□□ -2.06
ZNF540-207ENST00000589285 LYRM9A8MSI8 78 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 H3BMG7 143 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 H7C1H1 209 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 J3QQQ9 107 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 K7EMI3 77 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 DPM2O94777 84 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 NMUP48645 174 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 NPC2P61916 151 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 LAGE3Q14657 143 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 TMEM170BQ5T4T1 132 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 C3orf22Q8N5N4 141 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 MUC7Q8TAX7 377 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 IGKV2D-24A0A075B6R9 120 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 A0A0J9YXV3 536 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 KRTAP9-6A8MVA2 160 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 E9PLD3 99 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 I3L3M4 83 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 HAMPP81172 84 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 LGALS9BQ3B8N2 356 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 MRPL55Q7Z7F7 128 aaKnown RBP2.2□□□□□ -2.06
ZNF540-207ENST00000589285 LINC01561Q8N1V8 128 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 PPDPFLQ8WWR9 84 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 PLEKHB2Q96CS7 222 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 DPH3Q96FX2 82 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 CNFNQ9BYD5 112 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 ICOSQ9Y6W8 199 aa2.2□□□□□ -2.06
ZNF540-207ENST00000589285 DNAH9Q9NYC9 4486 aa2.19□□□□□ -2.06
ZNF540-207ENST00000589285 STARD9Q9P2P6 4700 aa2.19□□□□□ -2.06
ZNF540-207ENST00000589285 TRBV25-1A0A075B6N4 114 aa2.19□□□□□ -2.06
ZNF540-207ENST00000589285 A0A096LNJ9 63 aa2.19□□□□□ -2.06
ZNF540-207ENST00000589285 TRAV8-3A0A0A6YYJ7 113 aa2.19□□□□□ -2.06
ZNF540-207ENST00000589285 UQCRQO14949 82 aa2.19□□□□□ -2.06
ZNF540-207ENST00000589285 TRAV10A0A0B4J240 114 aa2.19□□□□□ -2.06
ZNF540-207ENST00000589285 HBDP02042 147 aa2.19□□□□□ -2.06
ZNF540-207ENST00000589285 POLR2KP53803 58 aaKnown RBP2.19□□□□□ -2.06
ZNF540-207ENST00000589285 HIGD2BQ4VC39 106 aa2.19□□□□□ -2.06
ZNF540-207ENST00000589285 LYPD5Q6UWN5 251 aa2.19□□□□□ -2.06
ZNF540-207ENST00000589285 BRK1Q8WUW1 75 aa2.19□□□□□ -2.06
ZNF540-207ENST00000589285 IFI27L1Q96BM0 104 aa2.19□□□□□ -2.06
ZNF540-207ENST00000589285 TMEM243Q9BU79 118 aa2.19□□□□□ -2.06
ZNF540-207ENST00000589285 MRPL35Q9NZE8 188 aaKnown RBP2.19□□□□□ -2.06
ZNF540-207ENST00000589285 KMT2CQ8NEZ4 4911 aaKnown RBP2.18□□□□□ -2.06
ZNF540-207ENST00000589285 TRBV6-8A0A0A6YYG3 113 aa2.18□□□□□ -2.06
ZNF540-207ENST00000589285 TRBV6-4A0A1B0GX49 114 aa2.18□□□□□ -2.06
ZNF540-207ENST00000589285 TRACP01848 142 aa2.18□□□□□ -2.06
ZNF540-207ENST00000589285 CCL18P55774 89 aa2.18□□□□□ -2.06
ZNF540-207ENST00000589285 UBE2D3P61077 147 aa2.18□□□□□ -2.06
ZNF540-207ENST00000589285 UBE2D2P62837 147 aa2.18□□□□□ -2.06
ZNF540-207ENST00000589285 CD164L2Q6UWJ8 174 aa2.18□□□□□ -2.06
ZNF540-207ENST00000589285 Q8N8P6 123 aa2.18□□□□□ -2.06
ZNF540-207ENST00000589285 HIGD1BQ9P298 99 aa2.18□□□□□ -2.06
ZNF540-207ENST00000589285 LINC00588Q9Y4M8 146 aa2.18□□□□□ -2.06
ZNF540-207ENST00000589285 DYNC2H1Q8NCM8 4307 aaKnown RBP2.18□□□□□ -2.06
ZNF540-207ENST00000589285 CASC10Q5T4H9 136 aa2.18□□□□□ -2.06
ZNF540-207ENST00000589285 ANKRD29Q8N6D5 301 aa2.18□□□□□ -2.06
ZNF540-207ENST00000589285 DAND5Q8N907 189 aa2.18□□□□□ -2.06
ZNF540-207ENST00000589285 C20orf203Q8NBC4 194 aa2.18□□□□□ -2.06
ZNF540-207ENST00000589285 NXT2Q9NPJ8 142 aaKnown RBP2.18□□□□□ -2.06
ZNF540-207ENST00000589285 LCE6AA0A183 80 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 PSCAO43653 123 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 CRPP02741 224 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 DNAH10OSP0CZ25 163 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 TMEM258P61165 79 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 CHCHD7Q9BUK0 85 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 PLECQ15149 4684 aaKnown RBP2.17□□□□□ -2.06
ZNF540-207ENST00000589285 FXYD2P54710 66 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 COX6A2Q02221 97 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 C2orf82Q6UX34 121 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 DSCR8Q96T75 97 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 CHAC1Q9BUX1 264 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 SPANXDQ9BXN6 97 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 OCR1Q9BZK8 76 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 KMT2AQ03164 3969 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 DNAH6Q9C0G6 4158 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 TRBV27A0A0K0K1C4 114 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 FAM240AA0A1B0GVK7 77 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 K7ERJ3 54 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 REG3AQ06141 175 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 ORMDL2Q53FV1 153 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 C9orf116Q5BN46 136 aaPredicted RBP2.17□□□□□ -2.06
ZNF540-207ENST00000589285 LGALS9CQ6DKI2 356 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 SFTA2Q6UW10 78 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 TEN1Q86WV5 123 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 CDKN2A-AS1Q9UH64 79 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 FLG2Q5D862 2391 aaPredicted RBP2.17□□□□□ -2.06
ZNF540-207ENST00000589285 DNAH10Q8IVF4 4471 aa2.17□□□□□ -2.06
ZNF540-207ENST00000589285 C11orf86A6NJI1 115 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms