RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 H3BRM9 83 aa9.92□□□□□ -0.82
CCDC57-219ENST00000584717 S100A12P80511 92 aa9.92□□□□□ -0.82
CCDC57-219ENST00000584717 C9orf129Q5T035 196 aaKnown RBP9.92□□□□□ -0.82
CCDC57-219ENST00000584717 TMEM170BQ5T4T1 132 aa9.91□□□□□ -0.82
CCDC57-219ENST00000584717 TRBV30A0A0K0K1B3 111 aa9.9□□□□□ -0.82
CCDC57-219ENST00000584717 NDUFC2-KCTD14E9PQ53 114 aa9.9□□□□□ -0.82
CCDC57-219ENST00000584717 RPL13AP40429 203 aaKnown RBP9.9□□□□□ -0.82
CCDC57-219ENST00000584717 HERVK_113P61574 105 aa9.9□□□□□ -0.82
CCDC57-219ENST00000584717 ATOH7Q8N100 152 aa9.9□□□□□ -0.82
CCDC57-219ENST00000584717 LINC00469Q8N7U9 141 aa9.9□□□□□ -0.82
CCDC57-219ENST00000584717 IGLV5-45A0A087WSX0 123 aa9.89□□□□□ -0.83
CCDC57-219ENST00000584717 ZNF22P17026 224 aaPredicted RBP9.89□□□□□ -0.83
CCDC57-219ENST00000584717 VAMP8Q9BV40 100 aa9.89□□□□□ -0.83
CCDC57-219ENST00000584717 LINC01561Q8N1V8 128 aa9.88□□□□□ -0.83
CCDC57-219ENST00000584717 CDKN2A-AS1Q9UH64 79 aa9.87□□□□□ -0.83
CCDC57-219ENST00000584717 TMEM223A0PJW6 202 aa9.86□□□□□ -0.83
CCDC57-219ENST00000584717 ZNF861PO60384 105 aa9.85□□□□□ -0.83
CCDC57-219ENST00000584717 TSPAN13O95857 204 aa9.85□□□□□ -0.83
CCDC57-219ENST00000584717 LINC00518Q8N0U6 118 aa9.85□□□□□ -0.83
CCDC57-219ENST00000584717 C12orf57Q99622 126 aa9.85□□□□□ -0.83
CCDC57-219ENST00000584717 TOMM7Q9P0U1 55 aa9.84□□□□□ -0.83
CCDC57-219ENST00000584717 E9PLD3 99 aa9.83□□□□□ -0.84
CCDC57-219ENST00000584717 PRSS2P07478 247 aa9.83□□□□□ -0.84
CCDC57-219ENST00000584717 SPATA45Q537H7 98 aa9.83□□□□□ -0.84
CCDC57-219ENST00000584717 PLEKHB2Q96CS7 222 aa9.83□□□□□ -0.84
CCDC57-219ENST00000584717 PAM16Q9Y3D7 125 aa9.83□□□□□ -0.84
CCDC57-219ENST00000584717 C22orf24Q9Y442 160 aa9.83□□□□□ -0.84
CCDC57-219ENST00000584717 LEPROTO15243 131 aa9.82□□□□□ -0.84
CCDC57-219ENST00000584717 XAGE1AQ9HD64 81 aa9.82□□□□□ -0.84
CCDC57-219ENST00000584717 A0A0U1RQV1 116 aa9.81□□□□□ -0.84
CCDC57-219ENST00000584717 SPINK8P0C7L1 97 aa9.81□□□□□ -0.84
CCDC57-219ENST00000584717 CKS1BP61024 79 aa9.81□□□□□ -0.84
CCDC57-219ENST00000584717 ANKRD39Q53RE8 183 aa9.81□□□□□ -0.84
CCDC57-219ENST00000584717 IGLV5-39A0A0G2JS06 123 aa9.8□□□□□ -0.84
CCDC57-219ENST00000584717 SMIM1B2RUZ4 78 aa9.8□□□□□ -0.84
CCDC57-219ENST00000584717 C6orf226Q5I0X4 101 aa9.8□□□□□ -0.84
CCDC57-219ENST00000584717 A0A087X002 238 aa9.79□□□□□ -0.84
CCDC57-219ENST00000584717 LGALS3P17931 250 aaKnown RBP9.79□□□□□ -0.84
CCDC57-219ENST00000584717 NMUP48645 174 aa9.79□□□□□ -0.84
CCDC57-219ENST00000584717 LBHQ53QV2 105 aaPredicted RBP9.79□□□□□ -0.84
CCDC57-219ENST00000584717 J3QQQ9 107 aa9.78□□□□□ -0.84
CCDC57-219ENST00000584717 Q8IZM0 81 aa9.78□□□□□ -0.84
CCDC57-219ENST00000584717 KRTAP9-2Q9BYQ4 174 aa9.78□□□□□ -0.84
CCDC57-219ENST00000584717 COX7B2Q8TF08 81 aa9.77□□□□□ -0.85
CCDC57-219ENST00000584717 IGKV2D-26A0A0A0MRZ7 120 aa9.76□□□□□ -0.85
CCDC57-219ENST00000584717 COX8AP10176 69 aa9.76□□□□□ -0.85
CCDC57-219ENST00000584717 RPL28P46779 137 aaKnown RBP9.76□□□□□ -0.85
CCDC57-219ENST00000584717 SFTA2Q6UW10 78 aa9.76□□□□□ -0.85
CCDC57-219ENST00000584717 MRPL55Q7Z7F7 128 aaKnown RBP9.76□□□□□ -0.85
CCDC57-219ENST00000584717 BCE1O60756 84 aa9.75□□□□□ -0.85
CCDC57-219ENST00000584717 TYMSOSQ8TAI1 123 aa9.75□□□□□ -0.85
CCDC57-219ENST00000584717 MYMXA0A1B0GTQ4 84 aa9.74□□□□□ -0.85
CCDC57-219ENST00000584717 TSTD3H0UI37 97 aa9.74□□□□□ -0.85
CCDC57-219ENST00000584717 DLEU1O43261 78 aa9.74□□□□□ -0.85
CCDC57-219ENST00000584717 CRYGAP11844 174 aa9.74□□□□□ -0.85
CCDC57-219ENST00000584717 CXCL5P42830 114 aa9.74□□□□□ -0.85
CCDC57-219ENST00000584717 SLC25A34Q6PIV7 304 aa9.74□□□□□ -0.85
CCDC57-219ENST00000584717 C14orf144Q96I85 54 aa9.74□□□□□ -0.85
CCDC57-219ENST00000584717 TP73-AS1Q9UF72 201 aa9.74□□□□□ -0.85
CCDC57-219ENST00000584717 NDUFA12Q9UI09 145 aa9.74□□□□□ -0.85
CCDC57-219ENST00000584717 RPL37AP8A6NKH3 93 aa9.73□□□□□ -0.85
CCDC57-219ENST00000584717 BOD1L2Q8IYS8 172 aa9.73□□□□□ -0.85
CCDC57-219ENST00000584717 ANAPC11Q9NYG5 84 aa9.73□□□□□ -0.85
CCDC57-219ENST00000584717 UQCR10Q9UDW1 63 aa9.73□□□□□ -0.85
CCDC57-219ENST00000584717 ZNF815PA8K554 130 aa9.72□□□□□ -0.85
CCDC57-219ENST00000584717 HERV-K104P63124 156 aa9.72□□□□□ -0.85
CCDC57-219ENST00000584717 PCP2Q8IVA1 136 aa9.72□□□□□ -0.85
CCDC57-219ENST00000584717 GAGE10A6NGK3 116 aa9.71□□□□□ -0.86
CCDC57-219ENST00000584717 LINC00587B1AMM8 73 aa9.71□□□□□ -0.86
CCDC57-219ENST00000584717 TSPEAR-AS2P59090 65 aa9.71□□□□□ -0.86
CCDC57-219ENST00000584717 LINC00167Q96N53 147 aa9.71□□□□□ -0.86
CCDC57-219ENST00000584717 MIEN1Q9BRT3 115 aa9.71□□□□□ -0.86
CCDC57-219ENST00000584717 PRO1933Q9H354 126 aa9.71□□□□□ -0.86
CCDC57-219ENST00000584717 RETNLBQ9BQ08 111 aa9.7□□□□□ -0.86
CCDC57-219ENST00000584717 FAT4Q6V0I7 4981 aa9.7□□□□□ -0.86
CCDC57-219ENST00000584717 KRTAP13-2Q52LG2 175 aa9.69□□□□□ -0.86
CCDC57-219ENST00000584717 LCE2AQ5TA79 106 aaPredicted RBP9.69□□□□□ -0.86
CCDC57-219ENST00000584717 SCGB1D4Q6XE38 83 aa9.69□□□□□ -0.86
CCDC57-219ENST00000584717 ZNF625Q96I27 306 aaPredicted RBP9.69□□□□□ -0.86
CCDC57-219ENST00000584717 TTTY13Q9BZ97 58 aa9.68□□□□□ -0.86
CCDC57-219ENST00000584717 UBE2AP49459 152 aa9.66□□□□□ -0.86
CCDC57-219ENST00000584717 HIGD1BQ9P298 99 aa9.66□□□□□ -0.86
CCDC57-219ENST00000584717 A0A0J9YXY3 114 aa9.65□□□□□ -0.86
CCDC57-219ENST00000584717 KRTAP13-1Q8IUC0 172 aa9.65□□□□□ -0.86
CCDC57-219ENST00000584717 TIMM17BO60830 172 aa9.64□□□□□ -0.87
CCDC57-219ENST00000584717 MEIG1Q5JSS6 88 aa9.64□□□□□ -0.87
CCDC57-219ENST00000584717 LINC00304Q8N9R0 145 aa9.64□□□□□ -0.87
CCDC57-219ENST00000584717 NKAPP1Q8N9T2 125 aa9.64□□□□□ -0.87
CCDC57-219ENST00000584717 MUC17Q685J3 4493 aa9.64□□□□□ -0.87
CCDC57-219ENST00000584717 IGLV5-37A0A075B6J1 123 aa9.63□□□□□ -0.87
CCDC57-219ENST00000584717 TMEM238C9JI98 176 aa9.63□□□□□ -0.87
CCDC57-219ENST00000584717 COX17Q14061 63 aa9.63□□□□□ -0.87
CCDC57-219ENST00000584717 IGKV2-28A0A075B6P5 120 aa9.62□□□□□ -0.87
CCDC57-219ENST00000584717 IGKV2D-28P01615 120 aa9.62□□□□□ -0.87
CCDC57-219ENST00000584717 FAM229BQ4G0N7 80 aa9.62□□□□□ -0.87
CCDC57-219ENST00000584717 Q6ZVH6 145 aa9.62□□□□□ -0.87
CCDC57-219ENST00000584717 LINC00158P58513 81 aa9.61□□□□□ -0.87
CCDC57-219ENST00000584717 CDIP1Q9H305 208 aa9.61□□□□□ -0.87
CCDC57-219ENST00000584717 ERG28Q9UKR5 140 aa9.61□□□□□ -0.87
CCDC57-219ENST00000584717 DDTP30046 118 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms