RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 KRTAP10-8P60410 259 aa6.06□□□□□ -1.44
SKA2-208ENST00000583927 C1orf137Q5JT78 98 aa6.06□□□□□ -1.44
SKA2-208ENST00000583927 FAM19A5Q7Z5A7 132 aaPredicted RBP6.06□□□□□ -1.44
SKA2-208ENST00000583927 TP73-AS1Q9UF72 201 aa6.06□□□□□ -1.44
SKA2-208ENST00000583927 IGLV7-43P04211 117 aa6.05□□□□□ -1.44
SKA2-208ENST00000583927 CHCHD1Q96BP2 118 aaKnown RBP6.05□□□□□ -1.44
SKA2-208ENST00000583927 PLA2G2DQ9UNK4 145 aa6.05□□□□□ -1.44
SKA2-208ENST00000583927 SPINK8P0C7L1 97 aa6.04□□□□□ -1.44
SKA2-208ENST00000583927 KRTAP11-1Q8IUC1 163 aa6.04□□□□□ -1.44
SKA2-208ENST00000583927 ZNF22P17026 224 aaPredicted RBP6.03□□□□□ -1.44
SKA2-208ENST00000583927 SFTA2Q6UW10 78 aa6.03□□□□□ -1.44
SKA2-208ENST00000583927 DIRC1Q969H9 104 aa6.03□□□□□ -1.44
SKA2-208ENST00000583927 C22orf24Q9Y442 160 aa6.03□□□□□ -1.44
SKA2-208ENST00000583927 IGLV5-37A0A075B6J1 123 aa6.02□□□□□ -1.45
SKA2-208ENST00000583927 TRAV12-1A0A0B4J245 112 aa6.02□□□□□ -1.45
SKA2-208ENST00000583927 NUPR1O60356 82 aa6.02□□□□□ -1.45
SKA2-208ENST00000583927 UBE2BP63146 152 aa6.02□□□□□ -1.45
SKA2-208ENST00000583927 COX17Q14061 63 aa6.02□□□□□ -1.45
SKA2-208ENST00000583927 PMCHL1Q16048 86 aa6.02□□□□□ -1.45
SKA2-208ENST00000583927 XAGE1AQ9HD64 81 aa6.02□□□□□ -1.45
SKA2-208ENST00000583927 H0Y9J4 135 aa6.01□□□□□ -1.45
SKA2-208ENST00000583927 BAGE3Q86Y29 109 aa6.01□□□□□ -1.45
SKA2-208ENST00000583927 C11orf86A6NJI1 115 aa6□□□□□ -1.45
SKA2-208ENST00000583927 MRPL55Q7Z7F7 128 aaKnown RBP6□□□□□ -1.45
SKA2-208ENST00000583927 IFI27L1Q96BM0 104 aa6□□□□□ -1.45
SKA2-208ENST00000583927 MIEN1Q9BRT3 115 aa6□□□□□ -1.45
SKA2-208ENST00000583927 C21orf62-AS1Q17RA5 79 aa5.99□□□□□ -1.45
SKA2-208ENST00000583927 CHTOPQ9Y3Y2 248 aaKnown RBP5.99□□□□□ -1.45
SKA2-208ENST00000583927 ZNF861PO60384 105 aa5.98□□□□□ -1.45
SKA2-208ENST00000583927 HSBP1O75506 76 aa5.98□□□□□ -1.45
SKA2-208ENST00000583927 TMEM170BQ5T4T1 132 aa5.98□□□□□ -1.45
SKA2-208ENST00000583927 ZNF625Q96I27 306 aaPredicted RBP5.98□□□□□ -1.45
SKA2-208ENST00000583927 ERG28Q9UKR5 140 aa5.98□□□□□ -1.45
SKA2-208ENST00000583927 UBR4Q5T4S7 5183 aa5.98□□□□□ -1.45
SKA2-208ENST00000583927 IGLV1-50A0A075B6I6 118 aa5.97□□□□□ -1.45
SKA2-208ENST00000583927 TMEM223A0PJW6 202 aa5.97□□□□□ -1.45
SKA2-208ENST00000583927 KRTAP1-4P0C5Y4 121 aa5.97□□□□□ -1.45
SKA2-208ENST00000583927 COL5A1-AS1Q5SY13 56 aa5.97□□□□□ -1.45
SKA2-208ENST00000583927 LINC00167Q96N53 147 aa5.97□□□□□ -1.45
SKA2-208ENST00000583927 LRP2P98164 4655 aa5.97□□□□□ -1.45
SKA2-208ENST00000583927 BCE1O60756 84 aa5.96□□□□□ -1.46
SKA2-208ENST00000583927 PFN2P35080 140 aa5.95□□□□□ -1.46
SKA2-208ENST00000583927 LINC00310P59036 64 aa5.95□□□□□ -1.46
SKA2-208ENST00000583927 FAM19A2Q8N3H0 131 aa5.95□□□□□ -1.46
SKA2-208ENST00000583927 NKAPP1Q8N9T2 125 aa5.95□□□□□ -1.46
SKA2-208ENST00000583927 SVIPQ8NHG7 77 aa5.95□□□□□ -1.46
SKA2-208ENST00000583927 SND1-IT1Q9HBX3 110 aa5.95□□□□□ -1.46
SKA2-208ENST00000583927 LEPROTL1O95214 131 aa5.94□□□□□ -1.46
SKA2-208ENST00000583927 VPREB1P12018 145 aa5.94□□□□□ -1.46
SKA2-208ENST00000583927 RPL13AP40429 203 aaKnown RBP5.94□□□□□ -1.46
SKA2-208ENST00000583927 RPL28P46779 137 aaKnown RBP5.94□□□□□ -1.46
SKA2-208ENST00000583927 RPL24P83731 157 aaKnown RBP5.94□□□□□ -1.46
SKA2-208ENST00000583927 SERF1AO75920 110 aa5.93□□□□□ -1.46
SKA2-208ENST00000583927 SCGB1D1O95968 90 aa5.93□□□□□ -1.46
SKA2-208ENST00000583927 HERV-K104P63124 156 aa5.93□□□□□ -1.46
SKA2-208ENST00000583927 KRTAP13-1Q8IUC0 172 aa5.93□□□□□ -1.46
SKA2-208ENST00000583927 PRR26Q8N8Z3 221 aa5.93□□□□□ -1.46
SKA2-208ENST00000583927 RPL37AP8A6NKH3 93 aa5.92□□□□□ -1.46
SKA2-208ENST00000583927 PLNP26678 52 aa5.92□□□□□ -1.46
SKA2-208ENST00000583927 UBE2V1Q13404 147 aa5.92□□□□□ -1.46
SKA2-208ENST00000583927 HSPB8Q9UJY1 196 aa5.92□□□□□ -1.46
SKA2-208ENST00000583927 C20orf202A1L168 122 aa5.91□□□□□ -1.46
SKA2-208ENST00000583927 VAMP8Q9BV40 100 aa5.91□□□□□ -1.46
SKA2-208ENST00000583927 UQCR10Q9UDW1 63 aa5.91□□□□□ -1.46
SKA2-208ENST00000583927 GAGE10A6NGK3 116 aa5.9□□□□□ -1.46
SKA2-208ENST00000583927 LINC00158P58513 81 aa5.9□□□□□ -1.46
SKA2-208ENST00000583927 IGKV2-28A0A075B6P5 120 aa5.89□□□□□ -1.47
SKA2-208ENST00000583927 LOC107984156A0A0G2JMH3 177 aa5.89□□□□□ -1.47
SKA2-208ENST00000583927 MYMXA0A1B0GTQ4 84 aa5.89□□□□□ -1.47
SKA2-208ENST00000583927 TMEM238LA0A1B0GVL6 79 aa5.89□□□□□ -1.47
SKA2-208ENST00000583927 IGKV2D-28P01615 120 aa5.89□□□□□ -1.47
SKA2-208ENST00000583927 ARL17AQ8IVW1 177 aa5.89□□□□□ -1.47
SKA2-208ENST00000583927 Q8NDZ9 215 aa5.89□□□□□ -1.47
SKA2-208ENST00000583927 NDUFA12Q9UI09 145 aa5.89□□□□□ -1.47
SKA2-208ENST00000583927 IGKV2D-26A0A0A0MRZ7 120 aa5.88□□□□□ -1.47
SKA2-208ENST00000583927 M0R378 163 aa5.88□□□□□ -1.47
SKA2-208ENST00000583927 LEPROTO15243 131 aa5.88□□□□□ -1.47
SKA2-208ENST00000583927 DPM2O94777 84 aa5.88□□□□□ -1.47
SKA2-208ENST00000583927 SMIM13P0DJ93 91 aa5.88□□□□□ -1.47
SKA2-208ENST00000583927 NMUP48645 174 aa5.88□□□□□ -1.47
SKA2-208ENST00000583927 XP32Q5T750 250 aa5.88□□□□□ -1.47
SKA2-208ENST00000583927 PLEKHB2Q96CS7 222 aa5.88□□□□□ -1.47
SKA2-208ENST00000583927 MAP1LC3CQ9BXW4 147 aa5.88□□□□□ -1.47
SKA2-208ENST00000583927 TMEM126AQ9H061 195 aa5.88□□□□□ -1.47
SKA2-208ENST00000583927 HSBP1L1C9JCN9 74 aa5.87□□□□□ -1.47
SKA2-208ENST00000583927 IGKCP01834 107 aa5.87□□□□□ -1.47
SKA2-208ENST00000583927 UBE2AP49459 152 aa5.87□□□□□ -1.47
SKA2-208ENST00000583927 FAM229BQ4G0N7 80 aa5.87□□□□□ -1.47
SKA2-208ENST00000583927 LPAP08519 4548 aa5.87□□□□□ -1.47
SKA2-208ENST00000583927 H0Y8G0 127 aa5.86□□□□□ -1.47
SKA2-208ENST00000583927 J3QQQ9 107 aa5.86□□□□□ -1.47
SKA2-208ENST00000583927 CRYGAP11844 174 aa5.86□□□□□ -1.47
SKA2-208ENST00000583927 TSPEAR-AS2P59090 65 aa5.86□□□□□ -1.47
SKA2-208ENST00000583927 HERVK_113P61574 105 aa5.86□□□□□ -1.47
SKA2-208ENST00000583927 MEIG1Q5JSS6 88 aa5.86□□□□□ -1.47
SKA2-208ENST00000583927 MIR7-3HGQ8N6C7 128 aa5.86□□□□□ -1.47
SKA2-208ENST00000583927 PAM16Q9Y3D7 125 aa5.86□□□□□ -1.47
SKA2-208ENST00000583927 A0A087X002 238 aa5.85□□□□□ -1.47
SKA2-208ENST00000583927 TMEM238C9JI98 176 aa5.85□□□□□ -1.47
SKA2-208ENST00000583927 SPATA45Q537H7 98 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms