RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 MRPL54Q6P161 138 aaKnown RBP6.01□□□□□ -1.45
CASC3-208ENST00000583649 SLC51BQ86UW2 128 aa6.01□□□□□ -1.45
CASC3-208ENST00000583649 Q8N8P6 123 aa6.01□□□□□ -1.45
CASC3-208ENST00000583649 TIMM17AQ99595 171 aa6.01□□□□□ -1.45
CASC3-208ENST00000583649 LIMD2Q9BT23 127 aa6.01□□□□□ -1.45
CASC3-208ENST00000583649 MRPL18Q9H0U6 180 aaKnown RBP6.01□□□□□ -1.45
CASC3-208ENST00000583649 PRYO14603 147 aa6□□□□□ -1.45
CASC3-208ENST00000583649 SFTA2Q6UW10 78 aa6□□□□□ -1.45
CASC3-208ENST00000583649 LINC00846Q9NV44 126 aa6□□□□□ -1.45
CASC3-208ENST00000583649 ERG28Q9UKR5 140 aa6□□□□□ -1.45
CASC3-208ENST00000583649 C9orf92A6NGG3 77 aa5.99□□□□□ -1.45
CASC3-208ENST00000583649 C9orf153Q5TBE3 101 aa5.99□□□□□ -1.45
CASC3-208ENST00000583649 SPINK8P0C7L1 97 aa5.98□□□□□ -1.45
CASC3-208ENST00000583649 ADIRFQ15847 76 aa5.98□□□□□ -1.45
CASC3-208ENST00000583649 RGS21Q2M5E4 152 aa5.98□□□□□ -1.45
CASC3-208ENST00000583649 ATP5L2Q7Z4Y8 100 aa5.98□□□□□ -1.45
CASC3-208ENST00000583649 SYNE2Q8WXH0 6885 aaKnown RBP5.98□□□□□ -1.45
CASC3-208ENST00000583649 MACF1Q9UPN3 7388 aaKnown RBP5.98□□□□□ -1.45
CASC3-208ENST00000583649 IGLV5-45A0A087WSX0 123 aa5.97□□□□□ -1.45
CASC3-208ENST00000583649 LINC01549A6NIU2 74 aa5.97□□□□□ -1.45
CASC3-208ENST00000583649 IGLV6-57P01721 117 aa5.97□□□□□ -1.45
CASC3-208ENST00000583649 NXT2Q9NPJ8 142 aaKnown RBP5.97□□□□□ -1.45
CASC3-208ENST00000583649 ERASQ7Z444 233 aa5.96□□□□□ -1.46
CASC3-208ENST00000583649 SCGB3A1Q96QR1 104 aa5.96□□□□□ -1.46
CASC3-208ENST00000583649 USH2AO75445 5202 aa5.96□□□□□ -1.46
CASC3-208ENST00000583649 TRAV9-1A0A075B6T8 112 aa5.95□□□□□ -1.46
CASC3-208ENST00000583649 A0A1B0GXF2 115 aa5.95□□□□□ -1.46
CASC3-208ENST00000583649 Q6Q795 121 aa5.95□□□□□ -1.46
CASC3-208ENST00000583649 SSPOA2VEC9 5147 aa5.94□□□□□ -1.46
CASC3-208ENST00000583649 KRTAP4-16G5E9R7 235 aaPredicted RBP5.94□□□□□ -1.46
CASC3-208ENST00000583649 ATP6V1G1O75348 118 aa5.94□□□□□ -1.46
CASC3-208ENST00000583649 RPL23P62829 140 aaKnown RBP5.94□□□□□ -1.46
CASC3-208ENST00000583649 ALKAL2Q6UX46 152 aa5.94□□□□□ -1.46
CASC3-208ENST00000583649 TOMM6Q96B49 74 aa5.94□□□□□ -1.46
CASC3-208ENST00000583649 NAT8Q9UHE5 227 aa5.94□□□□□ -1.46
CASC3-208ENST00000583649 KCNQ1DNQ9H478 68 aa5.93□□□□□ -1.46
CASC3-208ENST00000583649 SRP19P09132 144 aaKnown RBP5.92□□□□□ -1.46
CASC3-208ENST00000583649 SPRR1AP35321 89 aa5.92□□□□□ -1.46
CASC3-208ENST00000583649 LINC00158P58513 81 aa5.92□□□□□ -1.46
CASC3-208ENST00000583649 FCGBPQ9Y6R7 5405 aaPredicted RBP5.92□□□□□ -1.46
CASC3-208ENST00000583649 RPL37P61927 97 aaKnown RBP5.91□□□□□ -1.46
CASC3-208ENST00000583649 ZNF625Q96I27 306 aaPredicted RBP5.91□□□□□ -1.46
CASC3-208ENST00000583649 CST9LQ9H4G1 147 aa5.91□□□□□ -1.46
CASC3-208ENST00000583649 PMVKQ15126 192 aa5.9□□□□□ -1.46
CASC3-208ENST00000583649 SLC25A34Q6PIV7 304 aa5.9□□□□□ -1.46
CASC3-208ENST00000583649 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.46
CASC3-208ENST00000583649 BATF3Q9NR55 127 aa5.9□□□□□ -1.46
CASC3-208ENST00000583649 FLGP20930 4061 aaPredicted RBP5.9□□□□□ -1.47
CASC3-208ENST00000583649 JOSD1Q15040 202 aaPredicted RBP5.89□□□□□ -1.47
CASC3-208ENST00000583649 IGLV5-39A0A0G2JS06 123 aa5.88□□□□□ -1.47
CASC3-208ENST00000583649 BOD1L2Q8IYS8 172 aa5.88□□□□□ -1.47
CASC3-208ENST00000583649 Q8NDZ9 215 aa5.88□□□□□ -1.47
CASC3-208ENST00000583649 B5MCH6 92 aa5.87□□□□□ -1.47
CASC3-208ENST00000583649 NCR3O14931 201 aa5.87□□□□□ -1.47
CASC3-208ENST00000583649 TMEM238LA0A1B0GVL6 79 aa5.86□□□□□ -1.47
CASC3-208ENST00000583649 HRCT1Q6UXD1 115 aa5.86□□□□□ -1.47
CASC3-208ENST00000583649 FA2HQ7L5A8 372 aa5.86□□□□□ -1.47
CASC3-208ENST00000583649 C5orf52A6NGY3 159 aa5.85□□□□□ -1.47
CASC3-208ENST00000583649 LINC00587B1AMM8 73 aa5.85□□□□□ -1.47
CASC3-208ENST00000583649 ERC2-IT1O76042 136 aa5.85□□□□□ -1.47
CASC3-208ENST00000583649 Q6ZRX8 168 aa5.85□□□□□ -1.47
CASC3-208ENST00000583649 TRBV10-3A0A0K0K1G6 114 aa5.84□□□□□ -1.47
CASC3-208ENST00000583649 ADCYAP1P18509 176 aa5.84□□□□□ -1.47
CASC3-208ENST00000583649 ANAPC16Q96DE5 110 aa5.84□□□□□ -1.47
CASC3-208ENST00000583649 KRTAP9-8Q9BYQ0 159 aa5.84□□□□□ -1.47
CASC3-208ENST00000583649 hCG_2014768A0A024R1R8 64 aa5.83□□□□□ -1.48
CASC3-208ENST00000583649 A0A0U1RRA0 63 aa5.83□□□□□ -1.48
CASC3-208ENST00000583649 C20orf202A1L168 122 aa5.83□□□□□ -1.48
CASC3-208ENST00000583649 IGLC3P0DOY3 106 aa5.83□□□□□ -1.48
CASC3-208ENST00000583649 NDUFA6P56556 154 aa5.83□□□□□ -1.48
CASC3-208ENST00000583649 PEA15Q15121 130 aa5.83□□□□□ -1.48
CASC3-208ENST00000583649 HINT1P49773 126 aaPredicted RBP5.82□□□□□ -1.48
CASC3-208ENST00000583649 CD164Q04900 197 aa5.82□□□□□ -1.48
CASC3-208ENST00000583649 MEIG1Q5JSS6 88 aa5.82□□□□□ -1.48
CASC3-208ENST00000583649 ATP11AUNQ6ZP68 121 aa5.82□□□□□ -1.48
CASC3-208ENST00000583649 TCTE3Q8IZS6 198 aa5.82□□□□□ -1.48
CASC3-208ENST00000583649 DDTP30046 118 aa5.81□□□□□ -1.48
CASC3-208ENST00000583649 KIAA1644Q3SXP7 199 aa5.81□□□□□ -1.48
CASC3-208ENST00000583649 TMEM170BQ5T4T1 132 aa5.81□□□□□ -1.48
CASC3-208ENST00000583649 Q9BRP9 147 aa5.81□□□□□ -1.48
CASC3-208ENST00000583649 MAP1LC3CQ9BXW4 147 aa5.81□□□□□ -1.48
CASC3-208ENST00000583649 LAMTOR3Q9UHA4 124 aa5.81□□□□□ -1.48
CASC3-208ENST00000583649 ZNF22P17026 224 aaPredicted RBP5.8□□□□□ -1.48
CASC3-208ENST00000583649 SMCO4Q9NRQ5 59 aa5.8□□□□□ -1.48
CASC3-208ENST00000583649 CBY1Q9Y3M2 126 aa5.8□□□□□ -1.48
CASC3-208ENST00000583649 TRBV20-1A0A075B6N2 111 aa5.79□□□□□ -1.48
CASC3-208ENST00000583649 S100A7L2Q5SY68 101 aa5.79□□□□□ -1.48
CASC3-208ENST00000583649 TRBV10-2A0A0K0K1G8 114 aa5.78□□□□□ -1.48
CASC3-208ENST00000583649 H7C2G1 150 aa5.78□□□□□ -1.48
CASC3-208ENST00000583649 SMIM13P0DJ93 91 aa5.78□□□□□ -1.48
CASC3-208ENST00000583649 HERV-K104P63124 156 aa5.78□□□□□ -1.48
CASC3-208ENST00000583649 MIR7-3HGQ8N6C7 128 aa5.78□□□□□ -1.48
CASC3-208ENST00000583649 MT-ND4LP03901 98 aa5.77□□□□□ -1.49
CASC3-208ENST00000583649 KRTAP6-3Q3LI67 103 aa5.77□□□□□ -1.49
CASC3-208ENST00000583649 Q5XG85 94 aa5.77□□□□□ -1.49
CASC3-208ENST00000583649 PRO1933Q9H354 126 aa5.77□□□□□ -1.49
CASC3-208ENST00000583649 C10orf91Q5T1B1 145 aa5.76□□□□□ -1.49
CASC3-208ENST00000583649 MIEN1Q9BRT3 115 aa5.76□□□□□ -1.49
CASC3-208ENST00000583649 COMMD7Q86VX2 200 aa5.75□□□□□ -1.49
CASC3-208ENST00000583649 TRAV23DV6A0A075B6W5 121 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms