RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 WHAMMP3Q1A5X7 153 aa-0.22□□□□□ -2.44
SMCHD1-207ENST00000581711 C9orf153Q5TBE3 101 aa-0.22□□□□□ -2.44
SMCHD1-207ENST00000581711 C10orf113Q5VZT2 155 aa-0.22□□□□□ -2.44
SMCHD1-207ENST00000581711 SPRR4Q96PI1 79 aa-0.22□□□□□ -2.44
SMCHD1-207ENST00000581711 CDC42SE2Q9NRR3 84 aa-0.22□□□□□ -2.44
SMCHD1-207ENST00000581711 TET3O43151 1660 aa-0.22□□□□□ -2.44
SMCHD1-207ENST00000581711 ROCK2O75116 1388 aaKnown RBP-0.22□□□□□ -2.45
SMCHD1-207ENST00000581711 DNAJC13O75165 2243 aa-0.22□□□□□ -2.45
SMCHD1-207ENST00000581711 NSD3Q9BZ95 1437 aa-0.22□□□□□ -2.45
SMCHD1-207ENST00000581711 GAPVD1Q14C86 1478 aa-0.22□□□□□ -2.45
SMCHD1-207ENST00000581711 TRBV7-4A0A0J9YYF1 115 aa-0.23□□□□□ -2.45
SMCHD1-207ENST00000581711 SNAPC5O75971 98 aa-0.23□□□□□ -2.45
SMCHD1-207ENST00000581711 GNG11P61952 73 aa-0.23□□□□□ -2.45
SMCHD1-207ENST00000581711 FAM223AQ8IWN6 122 aa-0.23□□□□□ -2.45
SMCHD1-207ENST00000581711 FDCSPQ8NFU4 85 aa-0.23□□□□□ -2.45
SMCHD1-207ENST00000581711 FXYD6Q9H0Q3 95 aa-0.23□□□□□ -2.45
SMCHD1-207ENST00000581711 ARL2-SNX15V9GYD0 113 aa-0.23□□□□□ -2.45
SMCHD1-207ENST00000581711 MAGI1Q96QZ7 1491 aaPredicted RBP-0.23□□□□□ -2.45
SMCHD1-207ENST00000581711 FAM24AA6NFZ4 105 aa-0.24□□□□□ -2.45
SMCHD1-207ENST00000581711 F6UZH7 168 aa-0.24□□□□□ -2.45
SMCHD1-207ENST00000581711 RPL13AP3Q6NVV1 102 aa-0.24□□□□□ -2.45
SMCHD1-207ENST00000581711 FAM167A-AS1Q96KT0 104 aa-0.24□□□□□ -2.45
SMCHD1-207ENST00000581711 LINC01600Q96MT4 127 aa-0.24□□□□□ -2.45
SMCHD1-207ENST00000581711 SPRR2FQ96RM1 72 aa-0.24□□□□□ -2.45
SMCHD1-207ENST00000581711 PRO1933Q9H354 126 aa-0.24□□□□□ -2.45
SMCHD1-207ENST00000581711 DPH3P1Q9H4G8 78 aa-0.24□□□□□ -2.45
SMCHD1-207ENST00000581711 MYOM2P54296 1465 aa-0.24□□□□□ -2.45
SMCHD1-207ENST00000581711 EHBP1L1Q8N3D4 1523 aa-0.24□□□□□ -2.45
SMCHD1-207ENST00000581711 TULP4Q9NRJ4 1543 aa-0.24□□□□□ -2.45
SMCHD1-207ENST00000581711 SCN7AQ01118 1682 aa-0.24□□□□□ -2.45
SMCHD1-207ENST00000581711 NUP188Q5SRE5 1749 aa-0.24□□□□□ -2.45
SMCHD1-207ENST00000581711 ZZEF1O43149 2961 aa-0.24□□□□□ -2.45
SMCHD1-207ENST00000581711 PDCD11Q14690 1871 aaKnown RBP-0.24□□□□□ -2.45
SMCHD1-207ENST00000581711 DNAH5Q8TE73 4624 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 LINC00959A0A1B0GUT2 108 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 A0A1B0GWA3 101 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 EFCAB10A6NFE3 127 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 SYS1-DBNDD2H3BUS1 97 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 COX6CP09669 75 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 TRAPPC2P0DI81 140 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 TRAPPC2BP0DI82 140 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 Q0VG73 95 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 SVBPQ8N300 66 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 DEFB105AQ8NG35 78 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 USMG5Q96IX5 58 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 C12orf57Q99622 126 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 MANBALQ9NQG1 85 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 LINC00846Q9NV44 126 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 IER3IP1Q9Y5U9 82 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 SCAPERQ9BY12 1400 aa-0.25□□□□□ -2.45
SMCHD1-207ENST00000581711 XIRP2A4UGR9 3374 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 A0A0G2JMZ2 1700 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 XRN1Q8IZH2 1706 aaKnown RBP-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 FMN2Q9NZ56 1722 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 KIAA0556O60303 1618 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 TOP2BQ02880 1626 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 DIP2CQ9Y2E4 1556 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 C1orf167Q5SNV9 1468 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 NAP1L6A6NFF2 107 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 COX8AP10176 69 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 GNG4P50150 75 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 UBE2D3P61077 147 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 UBE2D2P62837 147 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 KLK9Q2XQG4 91 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 SFTA2Q6UW10 78 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 PRO1854Q9UHT4 67 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 ANKRD36A6QL64 1941 aa-0.26□□□□□ -2.45
SMCHD1-207ENST00000581711 EIF4G3O43432 1585 aaKnown RBP-0.27□□□□□ -2.45
SMCHD1-207ENST00000581711 NRKQ7Z2Y5 1582 aa-0.27□□□□□ -2.45
SMCHD1-207ENST00000581711 ADGRL2O95490 1459 aa-0.27□□□□□ -2.45
SMCHD1-207ENST00000581711 A0A1B0GV90 55 aa-0.27□□□□□ -2.45
SMCHD1-207ENST00000581711 FAM223BA6NKX1 122 aa-0.27□□□□□ -2.45
SMCHD1-207ENST00000581711 M0R2T5 61 aa-0.27□□□□□ -2.45
SMCHD1-207ENST00000581711 DLEU1O43261 78 aa-0.27□□□□□ -2.45
SMCHD1-207ENST00000581711 PPP3R1P63098 170 aa-0.27□□□□□ -2.45
SMCHD1-207ENST00000581711 KRTAP19-7Q3SYF9 63 aa-0.27□□□□□ -2.45
SMCHD1-207ENST00000581711 PLECQ15149 4684 aaKnown RBP-0.27□□□□□ -2.45
SMCHD1-207ENST00000581711 MAPKBP1O60336 1514 aa-0.28□□□□□ -2.45
SMCHD1-207ENST00000581711 IQSEC2Q5JU85 1478 aa-0.28□□□□□ -2.45
SMCHD1-207ENST00000581711 MRC2Q9UBG0 1479 aa-0.28□□□□□ -2.45
SMCHD1-207ENST00000581711 SMG1Q96Q15 3661 aaKnown RBP-0.28□□□□□ -2.45
SMCHD1-207ENST00000581711 APOBP04114 4563 aaKnown RBP-0.28□□□□□ -2.45
SMCHD1-207ENST00000581711 H3BQ15 152 aa-0.28□□□□□ -2.45
SMCHD1-207ENST00000581711 CORTO00230 105 aa-0.28□□□□□ -2.45
SMCHD1-207ENST00000581711 SAA2P0DJI9 122 aaPredicted RBP-0.28□□□□□ -2.45
SMCHD1-207ENST00000581711 S100A1P23297 94 aa-0.28□□□□□ -2.45
SMCHD1-207ENST00000581711 SEC11AP67812 179 aa-0.28□□□□□ -2.45
SMCHD1-207ENST00000581711 LCN9Q8WX39 176 aa-0.28□□□□□ -2.45
SMCHD1-207ENST00000581711 ARHGAP5Q13017 1502 aa-0.28□□□□□ -2.45
SMCHD1-207ENST00000581711 PAPPA2Q9BXP8 1791 aa-0.29□□□□□ -2.46
SMCHD1-207ENST00000581711 CHD1O14646 1710 aa-0.29□□□□□ -2.46
SMCHD1-207ENST00000581711 SPHKAPQ2M3C7 1700 aa-0.29□□□□□ -2.46
SMCHD1-207ENST00000581711 MARF1Q9Y4F3 1742 aaKnown RBP-0.29□□□□□ -2.46
SMCHD1-207ENST00000581711 CRYM-AS1A6NIL9 109 aa-0.29□□□□□ -2.46
SMCHD1-207ENST00000581711 CPSF4LA6NMK7 179 aaKnown RBP-0.29□□□□□ -2.46
SMCHD1-207ENST00000581711 SNCAP37840 140 aa-0.29□□□□□ -2.46
SMCHD1-207ENST00000581711 KRTDAPP60985 99 aa-0.29□□□□□ -2.46
SMCHD1-207ENST00000581711 GNG8Q9UK08 70 aa-0.29□□□□□ -2.46
SMCHD1-207ENST00000581711 APLNQ9ULZ1 77 aa-0.29□□□□□ -2.46
SMCHD1-207ENST00000581711 SLIT1O75093 1534 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms