RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 COPS9Q8WXC6 57 aa8.62□□□□□ -1.03
CDK5RAP3-217ENST00000580287 H3BNG1 76 aa8.62□□□□□ -1.03
CDK5RAP3-217ENST00000580287 C4orf26Q17RF5 130 aa8.62□□□□□ -1.03
CDK5RAP3-217ENST00000580287 MIR7-3HGQ8N6C7 128 aa8.62□□□□□ -1.03
CDK5RAP3-217ENST00000580287 FAM236AA0A1B0GUQ0 79 aa8.61□□□□□ -1.03
CDK5RAP3-217ENST00000580287 FAM236BA0A1B0GV22 79 aa8.61□□□□□ -1.03
CDK5RAP3-217ENST00000580287 A0A0A0MQY5 61 aa8.6□□□□□ -1.03
CDK5RAP3-217ENST00000580287 SMCR5Q8TEV8 140 aa8.6□□□□□ -1.03
CDK5RAP3-217ENST00000580287 KLK12Q9UKR0 248 aa8.59□□□□□ -1.03
CDK5RAP3-217ENST00000580287 COX7A2LO14548 114 aa8.59□□□□□ -1.03
CDK5RAP3-217ENST00000580287 ACYP1P07311 99 aa8.59□□□□□ -1.03
CDK5RAP3-217ENST00000580287 REG3AQ06141 175 aa8.59□□□□□ -1.03
CDK5RAP3-217ENST00000580287 CHCHD10Q8WYQ3 142 aaPredicted RBP8.58□□□□□ -1.04
CDK5RAP3-217ENST00000580287 FAM218AQ96MZ4 157 aa8.58□□□□□ -1.04
CDK5RAP3-217ENST00000580287 IMUPQ9GZP8 106 aa8.58□□□□□ -1.04
CDK5RAP3-217ENST00000580287 TMEM126AQ9H061 195 aa8.58□□□□□ -1.04
CDK5RAP3-217ENST00000580287 DNAH7Q8WXX0 4024 aa8.57□□□□□ -1.04
CDK5RAP3-217ENST00000580287 LINC00588Q9Y4M8 146 aa8.57□□□□□ -1.04
CDK5RAP3-217ENST00000580287 SND1-IT1Q9HBX3 110 aa8.57□□□□□ -1.04
CDK5RAP3-217ENST00000580287 PLECQ15149 4684 aaKnown RBP8.57□□□□□ -1.04
CDK5RAP3-217ENST00000580287 LINC00337Q8N6G1 96 aa8.56□□□□□ -1.04
CDK5RAP3-217ENST00000580287 Q9HAA7 133 aa8.56□□□□□ -1.04
CDK5RAP3-217ENST00000580287 STARD9Q9P2P6 4700 aa8.56□□□□□ -1.04
CDK5RAP3-217ENST00000580287 CD164L2Q6UWJ8 174 aa8.55□□□□□ -1.04
CDK5RAP3-217ENST00000580287 LINC00643Q86TS7 51 aa8.55□□□□□ -1.04
CDK5RAP3-217ENST00000580287 IGKV2-28A0A075B6P5 120 aa8.55□□□□□ -1.04
CDK5RAP3-217ENST00000580287 IBA57-AS1B1ANH7 110 aa8.55□□□□□ -1.04
CDK5RAP3-217ENST00000580287 IGKV2D-28P01615 120 aa8.55□□□□□ -1.04
CDK5RAP3-217ENST00000580287 CRPP02741 224 aa8.55□□□□□ -1.04
CDK5RAP3-217ENST00000580287 C22orf24Q9Y442 160 aa8.55□□□□□ -1.04
CDK5RAP3-217ENST00000580287 FAM19A1Q7Z5A9 133 aa8.54□□□□□ -1.04
CDK5RAP3-217ENST00000580287 CCL18P55774 89 aa8.54□□□□□ -1.04
CDK5RAP3-217ENST00000580287 ENHOQ6UWT2 76 aa8.54□□□□□ -1.04
CDK5RAP3-217ENST00000580287 TRACP01848 142 aa8.53□□□□□ -1.04
CDK5RAP3-217ENST00000580287 BAALC-AS2P0C853 105 aa8.53□□□□□ -1.04
CDK5RAP3-217ENST00000580287 SDIM1Q6ZPB5 146 aa8.53□□□□□ -1.04
CDK5RAP3-217ENST00000580287 Q8IZM0 81 aa8.53□□□□□ -1.04
CDK5RAP3-217ENST00000580287 C9orf153Q5TBE3 101 aa8.53□□□□□ -1.04
CDK5RAP3-217ENST00000580287 C3orf22Q8N5N4 141 aa8.53□□□□□ -1.04
CDK5RAP3-217ENST00000580287 PKIGQ9Y2B9 76 aa8.52□□□□□ -1.04
CDK5RAP3-217ENST00000580287 TRAV13-2A0A0B4J235 113 aa8.52□□□□□ -1.05
CDK5RAP3-217ENST00000580287 PRR3P79522 188 aaKnown RBP8.52□□□□□ -1.05
CDK5RAP3-217ENST00000580287 OR13C6PQ8NH95 151 aa8.52□□□□□ -1.05
CDK5RAP3-217ENST00000580287 APLNQ9ULZ1 77 aa8.51□□□□□ -1.05
CDK5RAP3-217ENST00000580287 LINC00526Q96FQ7 95 aa8.51□□□□□ -1.05
CDK5RAP3-217ENST00000580287 UQCRQO14949 82 aa8.5□□□□□ -1.05
CDK5RAP3-217ENST00000580287 C9orf116Q5BN46 136 aaPredicted RBP8.5□□□□□ -1.05
CDK5RAP3-217ENST00000580287 PRR26Q8N8Z3 221 aa8.5□□□□□ -1.05
CDK5RAP3-217ENST00000580287 PRR34Q9NV39 138 aa8.5□□□□□ -1.05
CDK5RAP3-217ENST00000580287 A0A087WYN8 130 aa8.49□□□□□ -1.05
CDK5RAP3-217ENST00000580287 CXCL5P42830 114 aa8.49□□□□□ -1.05
CDK5RAP3-217ENST00000580287 C9orf129Q5T035 196 aaKnown RBP8.49□□□□□ -1.05
CDK5RAP3-217ENST00000580287 GAGE2AQ6NT46 116 aa8.49□□□□□ -1.05
CDK5RAP3-217ENST00000580287 SMIM11BQ8TCY0 68 aa8.49□□□□□ -1.05
CDK5RAP3-217ENST00000580287 DNAH1Q9P2D7 4330 aa8.49□□□□□ -1.05
CDK5RAP3-217ENST00000580287 KIAA0087Q14695 138 aa8.49□□□□□ -1.05
CDK5RAP3-217ENST00000580287 DYNC2H1Q8NCM8 4307 aaKnown RBP8.48□□□□□ -1.05
CDK5RAP3-217ENST00000580287 C6orf223Q8N319 242 aa8.48□□□□□ -1.05
CDK5RAP3-217ENST00000580287 LINC01556Q5JQF7 62 aa8.48□□□□□ -1.05
CDK5RAP3-217ENST00000580287 KLK5Q9Y337 293 aaPredicted RBP8.48□□□□□ -1.05
CDK5RAP3-217ENST00000580287 INAFM2P0DMQ5 153 aa8.47□□□□□ -1.05
CDK5RAP3-217ENST00000580287 SPAG11BQ08648 103 aa8.47□□□□□ -1.05
CDK5RAP3-217ENST00000580287 SLPIP03973 132 aa8.47□□□□□ -1.05
CDK5RAP3-217ENST00000580287 DNAH10OSP0CZ25 163 aa8.46□□□□□ -1.05
CDK5RAP3-217ENST00000580287 C2orf48Q96LS8 159 aa8.46□□□□□ -1.06
CDK5RAP3-217ENST00000580287 NUPR2A6NF83 97 aa8.45□□□□□ -1.06
CDK5RAP3-217ENST00000580287 COX7CP15954 63 aa8.45□□□□□ -1.06
CDK5RAP3-217ENST00000580287 RPL28P46779 137 aaKnown RBP8.45□□□□□ -1.06
CDK5RAP3-217ENST00000580287 HIST1H4AP62805 103 aaKnown RBP8.45□□□□□ -1.06
CDK5RAP3-217ENST00000580287 TNP2Q05952 138 aa8.45□□□□□ -1.06
CDK5RAP3-217ENST00000580287 UNQ6190/PRO20217Q6UXQ8 127 aa8.45□□□□□ -1.06
CDK5RAP3-217ENST00000580287 UBE2DNLQ8IWF7 75 aa8.45□□□□□ -1.06
CDK5RAP3-217ENST00000580287 DNAH10Q8IVF4 4471 aa8.45□□□□□ -1.06
CDK5RAP3-217ENST00000580287 C10orf25Q5T742 122 aa8.45□□□□□ -1.06
CDK5RAP3-217ENST00000580287 KRTAP1-5Q9BYS1 174 aa8.45□□□□□ -1.06
CDK5RAP3-217ENST00000580287 IGKV2D-24A0A075B6R9 120 aa8.44□□□□□ -1.06
CDK5RAP3-217ENST00000580287 LOC107984640A0A0U1RRK4 108 aa8.44□□□□□ -1.06
CDK5RAP3-217ENST00000580287 CASC10Q5T4H9 136 aa8.43□□□□□ -1.06
CDK5RAP3-217ENST00000580287 Q8NDZ9 215 aa8.43□□□□□ -1.06
CDK5RAP3-217ENST00000580287 LECT2O14960 151 aa8.42□□□□□ -1.06
CDK5RAP3-217ENST00000580287 KRTAP26-1Q6PEX3 210 aa8.42□□□□□ -1.06
CDK5RAP3-217ENST00000580287 DNAL4O96015 105 aa8.42□□□□□ -1.06
CDK5RAP3-217ENST00000580287 COX17Q14061 63 aa8.42□□□□□ -1.06
CDK5RAP3-217ENST00000580287 UPK3BQ9BT76 320 aa8.42□□□□□ -1.06
CDK5RAP3-217ENST00000580287 ATOX1O00244 68 aa8.41□□□□□ -1.06
CDK5RAP3-217ENST00000580287 NCR3O14931 201 aa8.41□□□□□ -1.06
CDK5RAP3-217ENST00000580287 CRYGAP11844 174 aa8.41□□□□□ -1.06
CDK5RAP3-217ENST00000580287 HIGD2BQ4VC39 106 aa8.41□□□□□ -1.06
CDK5RAP3-217ENST00000580287 C14orf132Q9NPU4 83 aa8.41□□□□□ -1.06
CDK5RAP3-217ENST00000580287 MUC7Q8TAX7 377 aa8.4□□□□□ -1.06
CDK5RAP3-217ENST00000580287 PRO0628Q9UI54 55 aa8.4□□□□□ -1.06
CDK5RAP3-217ENST00000580287 C1orf195Q5TG92 126 aa8.4□□□□□ -1.07
CDK5RAP3-217ENST00000580287 CYSTM1Q9H1C7 97 aa8.4□□□□□ -1.07
CDK5RAP3-217ENST00000580287 KMT2AQ03164 3969 aa8.4□□□□□ -1.07
CDK5RAP3-217ENST00000580287 IGKV3D-7A0A0C4DH55 119 aa8.39□□□□□ -1.07
CDK5RAP3-217ENST00000580287 hADV29S1A0JD25 119 aa8.39□□□□□ -1.07
CDK5RAP3-217ENST00000580287 J3KT08 172 aa8.39□□□□□ -1.07
CDK5RAP3-217ENST00000580287 A0A1B0GX51 115 aa8.39□□□□□ -1.07
CDK5RAP3-217ENST00000580287 M0R2N4 97 aa8.38□□□□□ -1.07
CDK5RAP3-217ENST00000580287 RPL18AQ02543 176 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms