RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 FREM1Q5H8C1 2179 aa2.15□□□□□ -2.07
CHD9-220ENST00000569794 SPG11Q96JI7 2443 aa2.15□□□□□ -2.07
CHD9-220ENST00000569794 A0A1W2PPM0 123 aa2.15□□□□□ -2.07
CHD9-220ENST00000569794 DEFB103AP81534 67 aa2.15□□□□□ -2.07
CHD9-220ENST00000569794 Q86TA4 180 aa2.15□□□□□ -2.07
CHD9-220ENST00000569794 OBSCN-AS1Q96MR7 158 aa2.15□□□□□ -2.07
CHD9-220ENST00000569794 ARL2-SNX15V9GYD0 113 aa2.15□□□□□ -2.07
CHD9-220ENST00000569794 LAMB1P07942 1786 aa2.15□□□□□ -2.07
CHD9-220ENST00000569794 COL12A1Q99715 3063 aa2.14□□□□□ -2.07
CHD9-220ENST00000569794 SPAG17Q6Q759 2223 aa2.14□□□□□ -2.07
CHD9-220ENST00000569794 FREM2Q5SZK8 3169 aa2.14□□□□□ -2.07
CHD9-220ENST00000569794 ZNF815PA8K554 130 aa2.14□□□□□ -2.07
CHD9-220ENST00000569794 WFDC2Q14508 124 aa2.14□□□□□ -2.07
CHD9-220ENST00000569794 KRTAP13-4Q3LI77 160 aa2.14□□□□□ -2.07
CHD9-220ENST00000569794 NMSQ5H8A3 153 aa2.14□□□□□ -2.07
CHD9-220ENST00000569794 FAM223AQ8IWN6 122 aa2.14□□□□□ -2.07
CHD9-220ENST00000569794 PTPRFP10586 1907 aa2.14□□□□□ -2.07
CHD9-220ENST00000569794 PLXNA4Q9HCM2 1894 aa2.14□□□□□ -2.07
CHD9-220ENST00000569794 FLNCQ14315 2725 aa2.13□□□□□ -2.07
CHD9-220ENST00000569794 CEP192Q8TEP8 1941 aa2.13□□□□□ -2.07
CHD9-220ENST00000569794 TRBV25-1A0A075B6N4 114 aa2.13□□□□□ -2.07
CHD9-220ENST00000569794 KANTRA0A1W2PQU2 76 aa2.13□□□□□ -2.07
CHD9-220ENST00000569794 CAV3P56539 151 aa2.13□□□□□ -2.07
CHD9-220ENST00000569794 DEFA5Q01523 94 aa2.13□□□□□ -2.07
CHD9-220ENST00000569794 PSMG4Q5JS54 123 aa2.13□□□□□ -2.07
CHD9-220ENST00000569794 Q6ZQY7 126 aa2.13□□□□□ -2.07
CHD9-220ENST00000569794 SMCO4Q9NRQ5 59 aa2.13□□□□□ -2.07
CHD9-220ENST00000569794 ITPR2Q14571 2701 aa2.12□□□□□ -2.07
CHD9-220ENST00000569794 RP1L1Q8IWN7 2480 aaPredicted RBP2.12□□□□□ -2.07
CHD9-220ENST00000569794 CSMD1Q96PZ7 3565 aa2.12□□□□□ -2.07
CHD9-220ENST00000569794 LRRC37AA6NMS7 1700 aa2.12□□□□□ -2.07
CHD9-220ENST00000569794 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.12□□□□□ -2.07
CHD9-220ENST00000569794 CTXND1A0A1B0GTU2 59 aa2.12□□□□□ -2.07
CHD9-220ENST00000569794 SMIM31A0A1B0GVY4 71 aa2.12□□□□□ -2.07
CHD9-220ENST00000569794 F8VRH5 84 aa2.12□□□□□ -2.07
CHD9-220ENST00000569794 DEFB124Q8NES8 71 aa2.12□□□□□ -2.07
CHD9-220ENST00000569794 ZNF563Q8TA94 476 aa2.12□□□□□ -2.07
CHD9-220ENST00000569794 CCL19Q99731 98 aa2.12□□□□□ -2.07
CHD9-220ENST00000569794 NBEAL2Q6ZNJ1 2754 aa2.12□□□□□ -2.07
CHD9-220ENST00000569794 PCNX2A6NKB5 2137 aa2.12□□□□□ -2.07
CHD9-220ENST00000569794 MTORP42345 2549 aa2.12□□□□□ -2.07
CHD9-220ENST00000569794 LRBAP50851 2863 aa2.11□□□□□ -2.07
CHD9-220ENST00000569794 M0R135 149 aa2.11□□□□□ -2.07
CHD9-220ENST00000569794 BCE1O60756 84 aa2.11□□□□□ -2.07
CHD9-220ENST00000569794 CCL18P55774 89 aa2.11□□□□□ -2.07
CHD9-220ENST00000569794 SNRPFP62306 86 aaKnown RBP2.11□□□□□ -2.07
CHD9-220ENST00000569794 KLKP1Q107X0 134 aa2.11□□□□□ -2.07
CHD9-220ENST00000569794 UNQ6190/PRO20217Q6UXQ8 127 aa2.11□□□□□ -2.07
CHD9-220ENST00000569794 TMEM14BQ9NUH8 114 aa2.11□□□□□ -2.07
CHD9-220ENST00000569794 USP9YO00507 2555 aaPredicted RBP2.11□□□□□ -2.07
CHD9-220ENST00000569794 UTP20O75691 2785 aaKnown RBP2.11□□□□□ -2.07
CHD9-220ENST00000569794 ATRQ13535 2644 aa2.11□□□□□ -2.07
CHD9-220ENST00000569794 OTOGQ6ZRI0 2925 aa2.11□□□□□ -2.07
CHD9-220ENST00000569794 ICE1Q9Y2F5 2266 aa2.1□□□□□ -2.07
CHD9-220ENST00000569794 A0A087WTM6 91 aa2.1□□□□□ -2.07
CHD9-220ENST00000569794 SAA2P0DJI9 122 aaPredicted RBP2.1□□□□□ -2.07
CHD9-220ENST00000569794 BAGE3Q86Y29 109 aa2.1□□□□□ -2.07
CHD9-220ENST00000569794 NOTCH1P46531 2555 aa2.1□□□□□ -2.07
CHD9-220ENST00000569794 SIP14410 1827 aa2.1□□□□□ -2.07
CHD9-220ENST00000569794 MDC1Q14676 2089 aaKnown RBP2.1□□□□□ -2.07
CHD9-220ENST00000569794 DOCK1Q14185 1865 aa2.09□□□□□ -2.07
CHD9-220ENST00000569794 NIPBLQ6KC79 2804 aaeCLIP2.09□□□□□ -2.07
CHD9-220ENST00000569794 ARFGEF3Q5TH69 2177 aa2.09□□□□□ -2.07
CHD9-220ENST00000569794 HIVEP1P15822 2718 aa2.09□□□□□ -2.07
CHD9-220ENST00000569794 FAM223BA6NKX1 122 aa2.09□□□□□ -2.07
CHD9-220ENST00000569794 F2Z2F3 143 aa2.09□□□□□ -2.07
CHD9-220ENST00000569794 H3BUT2 72 aa2.09□□□□□ -2.07
CHD9-220ENST00000569794 EFNA4P52798 201 aa2.09□□□□□ -2.07
CHD9-220ENST00000569794 KRTAP12-3P60328 96 aa2.09□□□□□ -2.07
CHD9-220ENST00000569794 BVES-AS1Q5T3Y7 98 aa2.09□□□□□ -2.07
CHD9-220ENST00000569794 BAGE2Q86Y30 109 aa2.09□□□□□ -2.07
CHD9-220ENST00000569794 STAB1Q9NY15 2570 aa2.09□□□□□ -2.07
CHD9-220ENST00000569794 MYO18AQ92614 2054 aaKnown RBP2.09□□□□□ -2.07
CHD9-220ENST00000569794 F8P00451 2351 aa2.09□□□□□ -2.08
CHD9-220ENST00000569794 COL4A1P02462 1669 aa2.09□□□□□ -2.08
CHD9-220ENST00000569794 SPENQ96T58 3664 aaKnown RBP2.09□□□□□ -2.08
CHD9-220ENST00000569794 DOPEY2Q9Y3R5 2298 aa2.08□□□□□ -2.08
CHD9-220ENST00000569794 PLXNB2O15031 1838 aa2.08□□□□□ -2.08
CHD9-220ENST00000569794 ANKHD1Q8IWZ3 2542 aaKnown RBP2.08□□□□□ -2.08
CHD9-220ENST00000569794 M0R3E3 92 aa2.08□□□□□ -2.08
CHD9-220ENST00000569794 PDCD5O14737 125 aa2.08□□□□□ -2.08
CHD9-220ENST00000569794 WFDC6Q9BQY6 131 aa2.08□□□□□ -2.08
CHD9-220ENST00000569794 URB1O60287 2271 aaKnown RBP2.08□□□□□ -2.08
CHD9-220ENST00000569794 CR1P17927 2039 aa2.08□□□□□ -2.08
CHD9-220ENST00000569794 PDZD2O15018 2839 aa2.08□□□□□ -2.08
CHD9-220ENST00000569794 LOC285556D6RIA3 1793 aa2.08□□□□□ -2.08
CHD9-220ENST00000569794 JMJD1CQ15652 2540 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 TRGV1A0A0A0MS02 117 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 A0A1B0GWA3 101 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 C7orf77A4D0Y5 90 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 C10orf142B7Z368 130 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 F8WEM9 126 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 UQCR11O14957 56 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 ACYP1P07311 99 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 IGLC2P0DOY2 106 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 IGLC3P0DOY3 106 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 CFAP126Q5VTH2 177 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 LINC00643Q86TS7 51 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 ZGRF1Q86YA3 2104 aa2.07□□□□□ -2.08
CHD9-220ENST00000569794 AMELXQ99217 191 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms