RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 ARL17AQ8IVW1 177 aa5.02□□□□□ -1.61
CDH13-214ENST00000569455 PGPEP1Q9NXJ5 209 aa5.02□□□□□ -1.61
CDH13-214ENST00000569455 TRAV13-2A0A0B4J235 113 aa5.01□□□□□ -1.61
CDH13-214ENST00000569455 NDUFC2-KCTD14E9PQ53 114 aa5.01□□□□□ -1.61
CDH13-214ENST00000569455 M0R2N4 97 aa5.01□□□□□ -1.61
CDH13-214ENST00000569455 EIF4EBP3O60516 100 aaPredicted RBP5.01□□□□□ -1.61
CDH13-214ENST00000569455 NDUFC2O95298 119 aa5.01□□□□□ -1.61
CDH13-214ENST00000569455 Q1RN00 199 aa5.01□□□□□ -1.61
CDH13-214ENST00000569455 LYRM7Q5U5X0 104 aa5.01□□□□□ -1.61
CDH13-214ENST00000569455 Q6ZR54 194 aa5.01□□□□□ -1.61
CDH13-214ENST00000569455 DNAH17Q9UFH2 4485 aa5□□□□□ -1.61
CDH13-214ENST00000569455 LECT2O14960 151 aa5□□□□□ -1.61
CDH13-214ENST00000569455 TSPAN13O95857 204 aa5□□□□□ -1.61
CDH13-214ENST00000569455 FABP2P12104 132 aa5□□□□□ -1.61
CDH13-214ENST00000569455 VAMP3Q15836 100 aa5□□□□□ -1.61
CDH13-214ENST00000569455 PKIGQ9Y2B9 76 aa5□□□□□ -1.61
CDH13-214ENST00000569455 A0A1W2PPM0 123 aa4.99□□□□□ -1.61
CDH13-214ENST00000569455 H7C2G1 150 aa4.99□□□□□ -1.61
CDH13-214ENST00000569455 TLX1NBP0CAT3 122 aa4.99□□□□□ -1.61
CDH13-214ENST00000569455 RPL13AP40429 203 aaKnown RBP4.99□□□□□ -1.61
CDH13-214ENST00000569455 PSMB2P49721 201 aa4.99□□□□□ -1.61
CDH13-214ENST00000569455 Q6ZRN7 208 aaPredicted RBP4.99□□□□□ -1.61
CDH13-214ENST00000569455 LINC00336Q6ZUF6 198 aa4.99□□□□□ -1.61
CDH13-214ENST00000569455 NAA38Q9BRA0 125 aaKnown RBP4.99□□□□□ -1.61
CDH13-214ENST00000569455 FAT2Q9NYQ8 4349 aa4.99□□□□□ -1.61
CDH13-214ENST00000569455 LOC107984640A0A0U1RRK4 108 aa4.98□□□□□ -1.61
CDH13-214ENST00000569455 COX6CP09669 75 aa4.98□□□□□ -1.61
CDH13-214ENST00000569455 CNBPP62633 177 aaKnown RBP4.98□□□□□ -1.61
CDH13-214ENST00000569455 WFDC2Q14508 124 aa4.98□□□□□ -1.61
CDH13-214ENST00000569455 GAGE2EQ4V326 116 aa4.98□□□□□ -1.61
CDH13-214ENST00000569455 C1orf134Q5TEV5 83 aa4.98□□□□□ -1.61
CDH13-214ENST00000569455 GTF2H5Q6ZYL4 71 aa4.98□□□□□ -1.61
CDH13-214ENST00000569455 GAGE2DQ9UEU5 116 aa4.98□□□□□ -1.61
CDH13-214ENST00000569455 HERC1Q15751 4861 aa4.97□□□□□ -1.61
CDH13-214ENST00000569455 IGKV2-28A0A075B6P5 120 aa4.97□□□□□ -1.61
CDH13-214ENST00000569455 LRCOL1A6NCL2 159 aa4.97□□□□□ -1.61
CDH13-214ENST00000569455 IGKV2D-28P01615 120 aa4.97□□□□□ -1.61
CDH13-214ENST00000569455 SLPIP03973 132 aa4.97□□□□□ -1.61
CDH13-214ENST00000569455 SCGB1C2P0DMR2 95 aa4.97□□□□□ -1.61
CDH13-214ENST00000569455 RPL18AQ02543 176 aaKnown RBP4.97□□□□□ -1.61
CDH13-214ENST00000569455 LINC00337Q8N6G1 96 aa4.97□□□□□ -1.61
CDH13-214ENST00000569455 OR13C6PQ8NH95 151 aa4.97□□□□□ -1.61
CDH13-214ENST00000569455 XAGE1AQ9HD64 81 aa4.97□□□□□ -1.61
CDH13-214ENST00000569455 SPCS1Q9Y6A9 102 aa4.97□□□□□ -1.61
CDH13-214ENST00000569455 UBR4Q5T4S7 5183 aa4.96□□□□□ -1.61
CDH13-214ENST00000569455 TRBV10-2A0A0K0K1G8 114 aa4.96□□□□□ -1.62
CDH13-214ENST00000569455 GAGE10A6NGK3 116 aa4.96□□□□□ -1.62
CDH13-214ENST00000569455 K7EP34 96 aa4.96□□□□□ -1.62
CDH13-214ENST00000569455 S100A7L2Q5SY68 101 aa4.96□□□□□ -1.62
CDH13-214ENST00000569455 Q6ZRP5 223 aa4.96□□□□□ -1.62
CDH13-214ENST00000569455 TMEM126AQ9H061 195 aa4.96□□□□□ -1.62
CDH13-214ENST00000569455 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.95□□□□□ -1.62
CDH13-214ENST00000569455 TRBV20-1A0A075B6N2 111 aa4.95□□□□□ -1.62
CDH13-214ENST00000569455 A0A087WTM6 91 aa4.95□□□□□ -1.62
CDH13-214ENST00000569455 UBE2V1Q13404 147 aa4.95□□□□□ -1.62
CDH13-214ENST00000569455 Q8N814 137 aa4.95□□□□□ -1.62
CDH13-214ENST00000569455 CBY1Q9Y3M2 126 aa4.95□□□□□ -1.62
CDH13-214ENST00000569455 PKD1P98161 4303 aa4.95□□□□□ -1.62
CDH13-214ENST00000569455 NCR3O14931 201 aa4.94□□□□□ -1.62
CDH13-214ENST00000569455 TRIAP1O43715 76 aa4.94□□□□□ -1.62
CDH13-214ENST00000569455 RPL28P46779 137 aaKnown RBP4.94□□□□□ -1.62
CDH13-214ENST00000569455 GAGE2BQ13066 116 aa4.94□□□□□ -1.62
CDH13-214ENST00000569455 NKAPP1Q8N9T2 125 aa4.94□□□□□ -1.62
CDH13-214ENST00000569455 PLA2G2DQ9UNK4 145 aa4.94□□□□□ -1.62
CDH13-214ENST00000569455 C16orf90A8MZG2 172 aa4.93□□□□□ -1.62
CDH13-214ENST00000569455 M0R378 163 aa4.93□□□□□ -1.62
CDH13-214ENST00000569455 VPREB1P12018 145 aa4.93□□□□□ -1.62
CDH13-214ENST00000569455 PRR3P79522 188 aaKnown RBP4.93□□□□□ -1.62
CDH13-214ENST00000569455 C9orf129Q5T035 196 aaKnown RBP4.93□□□□□ -1.62
CDH13-214ENST00000569455 C9orf163Q8N9P6 203 aa4.93□□□□□ -1.62
CDH13-214ENST00000569455 PKHD1P08F94 4074 aa4.92□□□□□ -1.62
CDH13-214ENST00000569455 H0YGX0 51 aa4.92□□□□□ -1.62
CDH13-214ENST00000569455 RTL8CO15255 209 aa4.92□□□□□ -1.62
CDH13-214ENST00000569455 IGLV6-57P01721 117 aa4.92□□□□□ -1.62
CDH13-214ENST00000569455 ATXN8Q156A1 80 aa4.92□□□□□ -1.62
CDH13-214ENST00000569455 Q8NDZ9 215 aa4.92□□□□□ -1.62
CDH13-214ENST00000569455 SMIM11BQ8TCY0 68 aa4.92□□□□□ -1.62
CDH13-214ENST00000569455 KRTAP4-5Q9BYR2 181 aa4.92□□□□□ -1.62
CDH13-214ENST00000569455 IGLV5-37A0A075B6J1 123 aa4.91□□□□□ -1.62
CDH13-214ENST00000569455 A0A096LNI7 61 aa4.91□□□□□ -1.62
CDH13-214ENST00000569455 TCL1BO95988 128 aa4.91□□□□□ -1.62
CDH13-214ENST00000569455 LINC00474Q9P2X8 69 aa4.91□□□□□ -1.62
CDH13-214ENST00000569455 DNAH11Q96DT5 4516 aa4.91□□□□□ -1.62
CDH13-214ENST00000569455 TRAV23DV6A0A075B6W5 121 aa4.9□□□□□ -1.63
CDH13-214ENST00000569455 IGKV2-24A0A0C4DH68 120 aa4.9□□□□□ -1.63
CDH13-214ENST00000569455 TRBV10-3A0A0K0K1G6 114 aa4.9□□□□□ -1.63
CDH13-214ENST00000569455 H3BMG7 143 aa4.9□□□□□ -1.63
CDH13-214ENST00000569455 LST1O00453 97 aa4.89□□□□□ -1.63
CDH13-214ENST00000569455 SNCGO76070 127 aa4.89□□□□□ -1.63
CDH13-214ENST00000569455 SERTAD4-AS1Q5TG53 156 aa4.89□□□□□ -1.63
CDH13-214ENST00000569455 SDIM1Q6ZPB5 146 aa4.89□□□□□ -1.63
CDH13-214ENST00000569455 FAM19A5Q7Z5A7 132 aaPredicted RBP4.89□□□□□ -1.63
CDH13-214ENST00000569455 C7orf33Q8WU49 177 aa4.89□□□□□ -1.63
CDH13-214ENST00000569455 CLEC2BQ92478 149 aa4.89□□□□□ -1.63
CDH13-214ENST00000569455 DYNC1H1Q14204 4646 aaKnown RBP4.89□□□□□ -1.63
CDH13-214ENST00000569455 IGLV5-52A0A0A0MRZ9 124 aa4.88□□□□□ -1.63
CDH13-214ENST00000569455 FAM168BA1KXE4 195 aa4.88□□□□□ -1.63
CDH13-214ENST00000569455 F8W1H4 67 aa4.88□□□□□ -1.63
CDH13-214ENST00000569455 ZNF73O43830 326 aaPredicted RBP4.88□□□□□ -1.63
CDH13-214ENST00000569455 TNP2Q05952 138 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms