RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 DSCR8Q96T75 97 aa6.04□□□□□ -1.44
LINC00558-201ENST00000569422 TRAV13-2A0A0B4J235 113 aa6.03□□□□□ -1.44
LINC00558-201ENST00000569422 IGHV4-30-4P0DP06 118 aa6.03□□□□□ -1.44
LINC00558-201ENST00000569422 C15orf53Q8NAA6 179 aa6.03□□□□□ -1.44
LINC00558-201ENST00000569422 SMIM11BQ8TCY0 68 aa6.03□□□□□ -1.44
LINC00558-201ENST00000569422 PRR15Q8IV56 129 aa6.03□□□□□ -1.44
LINC00558-201ENST00000569422 LINC00612Q8N6U2 182 aa6.03□□□□□ -1.44
LINC00558-201ENST00000569422 CHCHD10Q8WYQ3 142 aaPredicted RBP6.03□□□□□ -1.44
LINC00558-201ENST00000569422 LYRM9A8MSI8 78 aa6.02□□□□□ -1.45
LINC00558-201ENST00000569422 TRACP01848 142 aa6.02□□□□□ -1.45
LINC00558-201ENST00000569422 REG3AQ06141 175 aa6.02□□□□□ -1.45
LINC00558-201ENST00000569422 A0A087WYN8 130 aa6.02□□□□□ -1.45
LINC00558-201ENST00000569422 SLPIP03973 132 aa6.02□□□□□ -1.45
LINC00558-201ENST00000569422 IBA57-AS1B1ANH7 110 aa6.02□□□□□ -1.45
LINC00558-201ENST00000569422 KLK12Q9UKR0 248 aa6.02□□□□□ -1.45
LINC00558-201ENST00000569422 DNAL4O96015 105 aa6.01□□□□□ -1.45
LINC00558-201ENST00000569422 STAB1Q9NY15 2570 aa6.01□□□□□ -1.45
LINC00558-201ENST00000569422 A0A1B0GUV1 79 aa6.01□□□□□ -1.45
LINC00558-201ENST00000569422 SPART-AS1P0CW21 52 aa6.01□□□□□ -1.45
LINC00558-201ENST00000569422 C6orf223Q8N319 242 aa6.01□□□□□ -1.45
LINC00558-201ENST00000569422 Q8NAQ8 132 aa6□□□□□ -1.45
LINC00558-201ENST00000569422 LECT2O14960 151 aa6□□□□□ -1.45
LINC00558-201ENST00000569422 COX7CP15954 63 aa6□□□□□ -1.45
LINC00558-201ENST00000569422 RPL28P46779 137 aaKnown RBP5.99□□□□□ -1.45
LINC00558-201ENST00000569422 NCR3O14931 201 aa5.98□□□□□ -1.45
LINC00558-201ENST00000569422 Q8IZM0 81 aa5.98□□□□□ -1.45
LINC00558-201ENST00000569422 NOTCH1P46531 2555 aa5.98□□□□□ -1.45
LINC00558-201ENST00000569422 MIFP14174 115 aa5.98□□□□□ -1.45
LINC00558-201ENST00000569422 C9orf129Q5T035 196 aaKnown RBP5.98□□□□□ -1.45
LINC00558-201ENST00000569422 PKD1L1Q8TDX9 2849 aa5.98□□□□□ -1.45
LINC00558-201ENST00000569422 TRBV7-7A0A0K0K1E9 115 aa5.98□□□□□ -1.45
LINC00558-201ENST00000569422 C10orf25Q5T742 122 aa5.98□□□□□ -1.45
LINC00558-201ENST00000569422 UNQ6190/PRO20217Q6UXQ8 127 aa5.98□□□□□ -1.45
LINC00558-201ENST00000569422 C14orf132Q9NPU4 83 aa5.96□□□□□ -1.45
LINC00558-201ENST00000569422 SPAG11BQ08648 103 aa5.96□□□□□ -1.46
LINC00558-201ENST00000569422 KIAA0087Q14695 138 aa5.96□□□□□ -1.46
LINC00558-201ENST00000569422 TM2D3Q9BRN9 247 aa5.96□□□□□ -1.46
LINC00558-201ENST00000569422 C22orf24Q9Y442 160 aa5.95□□□□□ -1.46
LINC00558-201ENST00000569422 FBN1P35555 2871 aaKnown RBP5.95□□□□□ -1.46
LINC00558-201ENST00000569422 PRB2P02812 416 aaPredicted RBP5.94□□□□□ -1.46
LINC00558-201ENST00000569422 KRTAP10-11P60412 298 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 HIGD2BQ4VC39 106 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 S100A7L2Q5SY68 101 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 LELP1Q5T871 98 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 Q6ZTC4 211 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 Q8NDZ9 215 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 LINC01600Q96MT4 127 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 LAMTOR3Q9UHA4 124 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 PLA2G2DQ9UNK4 145 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 hADV29S1A0JD25 119 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 CYSRT1A8MQ03 144 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 WFDC10BQ8IUB3 73 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 CYSTM1Q9H1C7 97 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 XAGE1AQ9HD64 81 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 H0YGX0 51 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 LYPD5Q6UWN5 251 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 FP248Q71RG6 208 aaPredicted RBP5.94□□□□□ -1.46
LINC00558-201ENST00000569422 WFDC9Q8NEX5 89 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 SMCR5Q8TEV8 140 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 IMUPQ9GZP8 106 aa5.94□□□□□ -1.46
LINC00558-201ENST00000569422 ANK2Q01484 3957 aa5.93□□□□□ -1.46
LINC00558-201ENST00000569422 TENM3Q9P273 2699 aa5.93□□□□□ -1.46
LINC00558-201ENST00000569422 SMIM26A0A096LP01 95 aa5.93□□□□□ -1.46
LINC00558-201ENST00000569422 ENHOQ6UWT2 76 aa5.93□□□□□ -1.46
LINC00558-201ENST00000569422 TRBV7-6A0A0J9YX20 115 aa5.93□□□□□ -1.46
LINC00558-201ENST00000569422 KPRPQ5T749 579 aaPredicted RBP5.93□□□□□ -1.46
LINC00558-201ENST00000569422 PRYO14603 147 aa5.92□□□□□ -1.46
LINC00558-201ENST00000569422 C6orf99Q4VX62 202 aa5.92□□□□□ -1.46
LINC00558-201ENST00000569422 DEFB121Q5J5C9 76 aa5.92□□□□□ -1.46
LINC00558-201ENST00000569422 SERP1Q9Y6X1 66 aa5.92□□□□□ -1.46
LINC00558-201ENST00000569422 COL6A5A8TX70 2615 aa5.92□□□□□ -1.46
LINC00558-201ENST00000569422 NANOS2P60321 138 aaKnown RBP5.91□□□□□ -1.46
LINC00558-201ENST00000569422 INAFM2P0DMQ5 153 aa5.91□□□□□ -1.46
LINC00558-201ENST00000569422 A0A0J9YWU9 116 aa5.9□□□□□ -1.46
LINC00558-201ENST00000569422 CXCL5P42830 114 aa5.9□□□□□ -1.46
LINC00558-201ENST00000569422 KRTAP24-1Q3LI83 254 aa5.9□□□□□ -1.46
LINC00558-201ENST00000569422 ORMDL1Q9P0S3 153 aa5.9□□□□□ -1.46
LINC00558-201ENST00000569422 NDUFC2-KCTD14E9PQ53 114 aa5.9□□□□□ -1.47
LINC00558-201ENST00000569422 TNP2Q05952 138 aa5.9□□□□□ -1.47
LINC00558-201ENST00000569422 KTN1-AS1Q86SY8 53 aa5.9□□□□□ -1.47
LINC00558-201ENST00000569422 LINC00528Q8N1L1 170 aa5.89□□□□□ -1.47
LINC00558-201ENST00000569422 IGKV3D-7A0A0C4DH55 119 aa5.89□□□□□ -1.47
LINC00558-201ENST00000569422 COX17Q14061 63 aa5.89□□□□□ -1.47
LINC00558-201ENST00000569422 ACYP1P07311 99 aa5.88□□□□□ -1.47
LINC00558-201ENST00000569422 UPK3BQ9BT76 320 aa5.88□□□□□ -1.47
LINC00558-201ENST00000569422 ESRGQ1W209 222 aa5.88□□□□□ -1.47
LINC00558-201ENST00000569422 SDIM1Q6ZPB5 146 aa5.88□□□□□ -1.47
LINC00558-201ENST00000569422 Q8N814 137 aa5.88□□□□□ -1.47
LINC00558-201ENST00000569422 CAMK2N2Q96S95 79 aa5.88□□□□□ -1.47
LINC00558-201ENST00000569422 C6orf48Q9UBA6 75 aa5.88□□□□□ -1.47
LINC00558-201ENST00000569422 IGKV2D-24A0A075B6R9 120 aa5.88□□□□□ -1.47
LINC00558-201ENST00000569422 PRR34Q9NV39 138 aa5.88□□□□□ -1.47
LINC00558-201ENST00000569422 DEFB131BA0A096LNP1 70 aa5.87□□□□□ -1.47
LINC00558-201ENST00000569422 LINC00643Q86TS7 51 aa5.87□□□□□ -1.47
LINC00558-201ENST00000569422 LINC00846Q9NV44 126 aa5.87□□□□□ -1.47
LINC00558-201ENST00000569422 TRBV10-3A0A0K0K1G6 114 aa5.85□□□□□ -1.47
LINC00558-201ENST00000569422 MDFIQ99750 246 aa5.85□□□□□ -1.47
LINC00558-201ENST00000569422 NBEAL1Q6ZS30 2694 aa5.85□□□□□ -1.47
LINC00558-201ENST00000569422 MGAM2Q2M2H8 2515 aa5.84□□□□□ -1.47
LINC00558-201ENST00000569422 A0A087WVE0 104 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms