RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 LINC01546A6NGU7 62 aa3.31□□□□□ -1.88
CDH13-212ENST00000569144 IGIPA6NJ69 53 aa3.31□□□□□ -1.88
CDH13-212ENST00000569144 APOC3P02656 99 aa3.31□□□□□ -1.88
CDH13-212ENST00000569144 SNRPEP62304 92 aaKnown RBP3.31□□□□□ -1.88
CDH13-212ENST00000569144 COX19Q49B96 90 aa3.31□□□□□ -1.88
CDH13-212ENST00000569144 ORMDL2Q53FV1 153 aa3.31□□□□□ -1.88
CDH13-212ENST00000569144 C9orf129Q5T035 196 aaKnown RBP3.31□□□□□ -1.88
CDH13-212ENST00000569144 ORAOV1Q8WV07 137 aa3.31□□□□□ -1.88
CDH13-212ENST00000569144 AMELXQ99217 191 aa3.31□□□□□ -1.88
CDH13-212ENST00000569144 ALKBH7Q9BT30 221 aaPredicted RBP3.31□□□□□ -1.88
CDH13-212ENST00000569144 RPS10P5Q9NQ39 176 aa3.31□□□□□ -1.88
CDH13-212ENST00000569144 IGKV2D-26A0A0A0MRZ7 120 aa3.3□□□□□ -1.88
CDH13-212ENST00000569144 TGIF2-C20orf24A0A0A6YYL0 155 aa3.3□□□□□ -1.88
CDH13-212ENST00000569144 BCE1O60756 84 aa3.3□□□□□ -1.88
CDH13-212ENST00000569144 LBHQ53QV2 105 aaPredicted RBP3.3□□□□□ -1.88
CDH13-212ENST00000569144 ZC2HC1BQ5TFG8 222 aa3.3□□□□□ -1.88
CDH13-212ENST00000569144 UNQ6190/PRO20217Q6UXQ8 127 aa3.3□□□□□ -1.88
CDH13-212ENST00000569144 TEX43Q6ZNM6 134 aa3.3□□□□□ -1.88
CDH13-212ENST00000569144 SVBPQ8N300 66 aa3.3□□□□□ -1.88
CDH13-212ENST00000569144 TOMM6Q96B49 74 aa3.3□□□□□ -1.88
CDH13-212ENST00000569144 YPEL4Q96NS1 127 aa3.3□□□□□ -1.88
CDH13-212ENST00000569144 TIMM17AQ99595 171 aa3.3□□□□□ -1.88
CDH13-212ENST00000569144 TRBV30A0A0K0K1B3 111 aa3.29□□□□□ -1.88
CDH13-212ENST00000569144 NDUFC2-KCTD14E9PQ53 114 aa3.29□□□□□ -1.88
CDH13-212ENST00000569144 SNAPINO95295 136 aa3.29□□□□□ -1.88
CDH13-212ENST00000569144 G0S2P27469 103 aa3.29□□□□□ -1.88
CDH13-212ENST00000569144 FABP9Q0Z7S8 132 aa3.29□□□□□ -1.88
CDH13-212ENST00000569144 KIAA0087Q14695 138 aa3.29□□□□□ -1.88
CDH13-212ENST00000569144 NDUFA5Q16718 116 aa3.29□□□□□ -1.88
CDH13-212ENST00000569144 Q6ZN92 141 aa3.29□□□□□ -1.88
CDH13-212ENST00000569144 ERASQ7Z444 233 aa3.29□□□□□ -1.88
CDH13-212ENST00000569144 FAM19A3Q7Z5A8 133 aa3.29□□□□□ -1.88
CDH13-212ENST00000569144 LINC01561Q8N1V8 128 aa3.29□□□□□ -1.88
CDH13-212ENST00000569144 C2orf88Q9BSF0 95 aa3.29□□□□□ -1.88
CDH13-212ENST00000569144 VCX2Q9H322 139 aa3.29□□□□□ -1.88
CDH13-212ENST00000569144 C22orf24Q9Y442 160 aa3.29□□□□□ -1.88
CDH13-212ENST00000569144 SSPOA2VEC9 5147 aa3.28□□□□□ -1.88
CDH13-212ENST00000569144 A0A096LNJ9 63 aa3.28□□□□□ -1.88
CDH13-212ENST00000569144 LINC01549A6NIU2 74 aa3.28□□□□□ -1.88
CDH13-212ENST00000569144 SPAG11AQ6PDA7 123 aa3.28□□□□□ -1.88
CDH13-212ENST00000569144 FA2HQ7L5A8 372 aa3.28□□□□□ -1.88
CDH13-212ENST00000569144 C18orf32Q8TCD1 76 aa3.28□□□□□ -1.88
CDH13-212ENST00000569144 TRAPPC1Q9Y5R8 145 aa3.28□□□□□ -1.88
CDH13-212ENST00000569144 C2orf82Q6UX34 121 aa3.27□□□□□ -1.89
CDH13-212ENST00000569144 NOTCH2NLQ7Z3S9 236 aa3.27□□□□□ -1.89
CDH13-212ENST00000569144 KRTAP13-1Q8IUC0 172 aa3.27□□□□□ -1.89
CDH13-212ENST00000569144 PACRGQ96M98 296 aaPredicted RBP3.27□□□□□ -1.89
CDH13-212ENST00000569144 SCGB3A1Q96QR1 104 aa3.27□□□□□ -1.89
CDH13-212ENST00000569144 TP73-AS1Q9UF72 201 aa3.27□□□□□ -1.89
CDH13-212ENST00000569144 USH2AO75445 5202 aa3.26□□□□□ -1.89
CDH13-212ENST00000569144 VPREB1P12018 145 aa3.26□□□□□ -1.89
CDH13-212ENST00000569144 HERVK_113P63121 156 aa3.26□□□□□ -1.89
CDH13-212ENST00000569144 SEC11AP67812 179 aa3.26□□□□□ -1.89
CDH13-212ENST00000569144 MRPL55Q7Z7F7 128 aaKnown RBP3.26□□□□□ -1.89
CDH13-212ENST00000569144 CBLN2Q8IUK8 224 aa3.26□□□□□ -1.89
CDH13-212ENST00000569144 Q8IZM0 81 aa3.26□□□□□ -1.89
CDH13-212ENST00000569144 CST9LQ9H4G1 147 aa3.26□□□□□ -1.89
CDH13-212ENST00000569144 SMCO4Q9NRQ5 59 aa3.26□□□□□ -1.89
CDH13-212ENST00000569144 CDKN2A-AS1Q9UH64 79 aa3.26□□□□□ -1.89
CDH13-212ENST00000569144 TINCRA0A1B0GVN0 87 aa3.25□□□□□ -1.89
CDH13-212ENST00000569144 M0R2T5 61 aa3.25□□□□□ -1.89
CDH13-212ENST00000569144 HBDP02042 147 aa3.25□□□□□ -1.89
CDH13-212ENST00000569144 LINC00614P0C842 121 aa3.25□□□□□ -1.89
CDH13-212ENST00000569144 UBE2AP49459 152 aa3.25□□□□□ -1.89
CDH13-212ENST00000569144 PMVKQ15126 192 aa3.25□□□□□ -1.89
CDH13-212ENST00000569144 PMCHL1Q16048 86 aa3.25□□□□□ -1.89
CDH13-212ENST00000569144 PDZD11Q5EBL8 140 aa3.25□□□□□ -1.89
CDH13-212ENST00000569144 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
CDH13-212ENST00000569144 SLC7A5P1Q8MH63 180 aa3.25□□□□□ -1.89
CDH13-212ENST00000569144 C3orf22Q8N5N4 141 aa3.25□□□□□ -1.89
CDH13-212ENST00000569144 LINC00469Q8N7U9 141 aa3.25□□□□□ -1.89
CDH13-212ENST00000569144 DAND5Q8N907 189 aa3.25□□□□□ -1.89
CDH13-212ENST00000569144 GEMIN7Q9H840 131 aaKnown RBP3.25□□□□□ -1.89
CDH13-212ENST00000569144 TOMM7Q9P0U1 55 aa3.25□□□□□ -1.89
CDH13-212ENST00000569144 IGLV9-49A0A0B4J1Y8 123 aa3.24□□□□□ -1.89
CDH13-212ENST00000569144 IGLC3P0DOY3 106 aa3.24□□□□□ -1.89
CDH13-212ENST00000569144 RAB5BP61020 215 aa3.24□□□□□ -1.89
CDH13-212ENST00000569144 LINC00167Q96N53 147 aa3.24□□□□□ -1.89
CDH13-212ENST00000569144 XAGE1AQ9HD64 81 aa3.24□□□□□ -1.89
CDH13-212ENST00000569144 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
CDH13-212ENST00000569144 RPL37AP8A6NKH3 93 aa3.23□□□□□ -1.89
CDH13-212ENST00000569144 F8VRH5 84 aa3.23□□□□□ -1.89
CDH13-212ENST00000569144 ATP5LO75964 103 aa3.23□□□□□ -1.89
CDH13-212ENST00000569144 SPINK8P0C7L1 97 aa3.23□□□□□ -1.89
CDH13-212ENST00000569144 CXCL5P42830 114 aa3.23□□□□□ -1.89
CDH13-212ENST00000569144 CKS1BP61024 79 aa3.23□□□□□ -1.89
CDH13-212ENST00000569144 C6orf226Q5I0X4 101 aa3.23□□□□□ -1.89
CDH13-212ENST00000569144 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
CDH13-212ENST00000569144 COX7B2Q8TF08 81 aa3.23□□□□□ -1.89
CDH13-212ENST00000569144 CHCHD1Q96BP2 118 aaKnown RBP3.23□□□□□ -1.89
CDH13-212ENST00000569144 NDUFA12Q9UI09 145 aa3.23□□□□□ -1.89
CDH13-212ENST00000569144 C11orf86A6NJI1 115 aa3.22□□□□□ -1.89
CDH13-212ENST00000569144 ZNF22P17026 224 aaPredicted RBP3.22□□□□□ -1.89
CDH13-212ENST00000569144 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
CDH13-212ENST00000569144 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
CDH13-212ENST00000569144 IGLV8-61A0A075B6I0 122 aa3.21□□□□□ -1.9
CDH13-212ENST00000569144 TRAV12-1A0A0B4J245 112 aa3.21□□□□□ -1.9
CDH13-212ENST00000569144 COLCA2A8K830 154 aa3.21□□□□□ -1.9
CDH13-212ENST00000569144 H3BRM9 83 aa3.21□□□□□ -1.9
CDH13-212ENST00000569144 SPINK1P00995 79 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms