RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 PRO0628Q9UI54 55 aa7.6□□□□□ -1.19
PALB2-206ENST00000568219 NANOS2P60321 138 aaKnown RBP7.6□□□□□ -1.19
PALB2-206ENST00000568219 V9GYY9 64 aa7.6□□□□□ -1.19
PALB2-206ENST00000568219 TRBV10-3A0A0K0K1G6 114 aa7.6□□□□□ -1.19
PALB2-206ENST00000568219 CYSRT1A8MQ03 144 aa7.6□□□□□ -1.19
PALB2-206ENST00000568219 LINC00482Q8N8I6 264 aa7.6□□□□□ -1.19
PALB2-206ENST00000568219 NF1P21359 2839 aa7.59□□□□□ -1.19
PALB2-206ENST00000568219 PDE6GP18545 87 aa7.59□□□□□ -1.19
PALB2-206ENST00000568219 CD164L2Q6UWJ8 174 aa7.59□□□□□ -1.19
PALB2-206ENST00000568219 FAM30AQ9NZY2 134 aa7.59□□□□□ -1.19
PALB2-206ENST00000568219 LINC00575Q6W349 94 aa7.58□□□□□ -1.2
PALB2-206ENST00000568219 FLNAP21333 2647 aaKnown RBP7.58□□□□□ -1.2
PALB2-206ENST00000568219 OXTP01178 125 aa7.58□□□□□ -1.2
PALB2-206ENST00000568219 TMEM254Q8TBM7 123 aa7.58□□□□□ -1.2
PALB2-206ENST00000568219 C22orf24Q9Y442 160 aa7.58□□□□□ -1.2
PALB2-206ENST00000568219 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.57□□□□□ -1.2
PALB2-206ENST00000568219 UNC79Q9P2D8 2635 aa7.57□□□□□ -1.2
PALB2-206ENST00000568219 FAM19A3Q7Z5A8 133 aa7.57□□□□□ -1.2
PALB2-206ENST00000568219 M0R2N4 97 aa7.56□□□□□ -1.2
PALB2-206ENST00000568219 IGKV2D-24A0A075B6R9 120 aa7.56□□□□□ -1.2
PALB2-206ENST00000568219 MUC7Q8TAX7 377 aa7.56□□□□□ -1.2
PALB2-206ENST00000568219 ZNF73O43830 326 aaPredicted RBP7.55□□□□□ -1.2
PALB2-206ENST00000568219 IGHV4-31P0DP07 118 aa7.55□□□□□ -1.2
PALB2-206ENST00000568219 C10orf25Q5T742 122 aa7.55□□□□□ -1.2
PALB2-206ENST00000568219 PSPHP1O15172 72 aa7.55□□□□□ -1.2
PALB2-206ENST00000568219 DNAJC9-AS1A6NH13 148 aa7.55□□□□□ -1.2
PALB2-206ENST00000568219 SPATA3Q8NHX4 192 aa7.54□□□□□ -1.2
PALB2-206ENST00000568219 NDUFC1O43677 76 aa7.54□□□□□ -1.2
PALB2-206ENST00000568219 CR1P17927 2039 aa7.54□□□□□ -1.2
PALB2-206ENST00000568219 H7BZZ5 65 aa7.54□□□□□ -1.2
PALB2-206ENST00000568219 Q6ZQT0 140 aa7.54□□□□□ -1.2
PALB2-206ENST00000568219 SPTSSBQ8NFR3 76 aa7.53□□□□□ -1.2
PALB2-206ENST00000568219 CFAP46Q8IYW2 2715 aa7.53□□□□□ -1.2
PALB2-206ENST00000568219 HIGD2AQ9BW72 106 aa7.53□□□□□ -1.2
PALB2-206ENST00000568219 ITPR3Q14573 2671 aa7.53□□□□□ -1.2
PALB2-206ENST00000568219 UBE2BP63146 152 aa7.52□□□□□ -1.21
PALB2-206ENST00000568219 UTP20O75691 2785 aaKnown RBP7.52□□□□□ -1.21
PALB2-206ENST00000568219 Q5XG85 94 aa7.51□□□□□ -1.21
PALB2-206ENST00000568219 COX17Q14061 63 aa7.51□□□□□ -1.21
PALB2-206ENST00000568219 ATRQ13535 2644 aa7.51□□□□□ -1.21
PALB2-206ENST00000568219 KRTAP10-9P60411 292 aa7.51□□□□□ -1.21
PALB2-206ENST00000568219 ETDCA0A1B0GVM5 59 aa7.5□□□□□ -1.21
PALB2-206ENST00000568219 PRYO14603 147 aa7.5□□□□□ -1.21
PALB2-206ENST00000568219 FASNP49327 2511 aaKnown RBP7.5□□□□□ -1.21
PALB2-206ENST00000568219 RPL37AP8A6NKH3 93 aa7.49□□□□□ -1.21
PALB2-206ENST00000568219 DEFB113Q30KQ7 82 aa7.49□□□□□ -1.21
PALB2-206ENST00000568219 DEFB116Q30KQ4 102 aa7.48□□□□□ -1.21
PALB2-206ENST00000568219 WFDC13Q8IUB5 93 aa7.48□□□□□ -1.21
PALB2-206ENST00000568219 CELSR2Q9HCU4 2923 aa7.47□□□□□ -1.21
PALB2-206ENST00000568219 SPART-AS1P0CW21 52 aa7.47□□□□□ -1.21
PALB2-206ENST00000568219 WFDC10BQ8IUB3 73 aa7.47□□□□□ -1.21
PALB2-206ENST00000568219 APCP25054 2843 aa7.47□□□□□ -1.21
PALB2-206ENST00000568219 ESRGQ1W209 222 aa7.47□□□□□ -1.21
PALB2-206ENST00000568219 A0A096LNI7 61 aa7.46□□□□□ -1.22
PALB2-206ENST00000568219 A0A0J9YWU9 116 aa7.46□□□□□ -1.22
PALB2-206ENST00000568219 A0A096LNT2 108 aa7.46□□□□□ -1.22
PALB2-206ENST00000568219 CXCL6P80162 114 aa7.46□□□□□ -1.22
PALB2-206ENST00000568219 A0A1B0GUV1 79 aa7.45□□□□□ -1.22
PALB2-206ENST00000568219 H3BQ85 93 aa7.45□□□□□ -1.22
PALB2-206ENST00000568219 OBSCN-AS1Q96MR7 158 aa7.45□□□□□ -1.22
PALB2-206ENST00000568219 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
PALB2-206ENST00000568219 SEC61GP60059 68 aa7.45□□□□□ -1.22
PALB2-206ENST00000568219 APOC4P55056 127 aa7.44□□□□□ -1.22
PALB2-206ENST00000568219 MP68P56378 58 aa7.44□□□□□ -1.22
PALB2-206ENST00000568219 LY6G6DO95868 133 aa7.44□□□□□ -1.22
PALB2-206ENST00000568219 MXRA5Q9NR99 2828 aa7.44□□□□□ -1.22
PALB2-206ENST00000568219 KLKP1Q107X0 134 aa7.44□□□□□ -1.22
PALB2-206ENST00000568219 NIPBLQ6KC79 2804 aaeCLIP7.44□□□□□ -1.22
PALB2-206ENST00000568219 UBR5O95071 2799 aaPredicted RBP7.43□□□□□ -1.22
PALB2-206ENST00000568219 WIPF1O43516 503 aa7.43□□□□□ -1.22
PALB2-206ENST00000568219 SMIM29Q86T20 159 aa7.43□□□□□ -1.22
PALB2-206ENST00000568219 HECTD1Q9ULT8 2610 aa7.43□□□□□ -1.22
PALB2-206ENST00000568219 LYPD5Q6UWN5 251 aa7.43□□□□□ -1.22
PALB2-206ENST00000568219 M0R378 163 aa7.42□□□□□ -1.22
PALB2-206ENST00000568219 IGLV1-51P01701 117 aa7.42□□□□□ -1.22
PALB2-206ENST00000568219 GIG44P09565 113 aaPredicted RBP7.41□□□□□ -1.22
PALB2-206ENST00000568219 PMAIP1Q13794 54 aa7.41□□□□□ -1.22
PALB2-206ENST00000568219 LOC110117498A0A087WWA1 95 aa7.41□□□□□ -1.22
PALB2-206ENST00000568219 TEP1Q99973 2627 aaKnown RBP7.4□□□□□ -1.22
PALB2-206ENST00000568219 KIAA0087Q14695 138 aa7.4□□□□□ -1.22
PALB2-206ENST00000568219 BAHCC1Q9P281 2608 aa7.4□□□□□ -1.23
PALB2-206ENST00000568219 LYRM9A8MSI8 78 aa7.4□□□□□ -1.23
PALB2-206ENST00000568219 CHKB-CPT1BH3BT56 60 aa7.4□□□□□ -1.23
PALB2-206ENST00000568219 FP248Q71RG6 208 aaPredicted RBP7.4□□□□□ -1.23
PALB2-206ENST00000568219 C6orf48Q9UBA6 75 aa7.4□□□□□ -1.23
PALB2-206ENST00000568219 PLAC8L1A1L4L8 177 aa7.39□□□□□ -1.23
PALB2-206ENST00000568219 SETXQ7Z333 2677 aaKnown RBP7.39□□□□□ -1.23
PALB2-206ENST00000568219 C1orf137Q5JT78 98 aa7.39□□□□□ -1.23
PALB2-206ENST00000568219 LINC00208Q96KT6 92 aa7.39□□□□□ -1.23
PALB2-206ENST00000568219 Q8NDZ9 215 aa7.38□□□□□ -1.23
PALB2-206ENST00000568219 LELP1Q5T871 98 aa7.38□□□□□ -1.23
PALB2-206ENST00000568219 Q6ZRU5 148 aa7.38□□□□□ -1.23
PALB2-206ENST00000568219 IGKV2-24A0A0C4DH68 120 aa7.38□□□□□ -1.23
PALB2-206ENST00000568219 SYCNQ0VAF6 134 aa7.38□□□□□ -1.23
PALB2-206ENST00000568219 NDUFS5O43920 106 aa7.36□□□□□ -1.23
PALB2-206ENST00000568219 BCE1O60756 84 aa7.36□□□□□ -1.23
PALB2-206ENST00000568219 KPRPQ5T749 579 aaPredicted RBP7.36□□□□□ -1.23
PALB2-206ENST00000568219 FAM229BQ4G0N7 80 aa7.35□□□□□ -1.23
PALB2-206ENST00000568219 NOTCH1P46531 2555 aa7.35□□□□□ -1.23
PALB2-206ENST00000568219 H0Y9J4 135 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms