RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 IGLV5-39A0A0G2JS06 123 aa2.89□□□□□ -1.95
CLK3-219ENST00000567805 LOC105371267A0A1B0GV96 52 aa2.89□□□□□ -1.95
CLK3-219ENST00000567805 ZNF861PO60384 105 aa2.89□□□□□ -1.95
CLK3-219ENST00000567805 ATP5LO75964 103 aa2.89□□□□□ -1.95
CLK3-219ENST00000567805 HBDP02042 147 aa2.89□□□□□ -1.95
CLK3-219ENST00000567805 APOC3P02656 99 aa2.89□□□□□ -1.95
CLK3-219ENST00000567805 NDUFA6P56556 154 aa2.89□□□□□ -1.95
CLK3-219ENST00000567805 RAB5BP61020 215 aa2.89□□□□□ -1.95
CLK3-219ENST00000567805 MRPL55Q7Z7F7 128 aaKnown RBP2.89□□□□□ -1.95
CLK3-219ENST00000567805 URB1-AS1Q96HZ7 61 aa2.89□□□□□ -1.95
CLK3-219ENST00000567805 IGLV5-37A0A075B6J1 123 aa2.88□□□□□ -1.95
CLK3-219ENST00000567805 KRTAP1-4P0C5Y4 121 aa2.88□□□□□ -1.95
CLK3-219ENST00000567805 ZNF22P17026 224 aaPredicted RBP2.88□□□□□ -1.95
CLK3-219ENST00000567805 RPL13AP40429 203 aaKnown RBP2.88□□□□□ -1.95
CLK3-219ENST00000567805 COX17Q14061 63 aa2.88□□□□□ -1.95
CLK3-219ENST00000567805 PMCHL1Q16048 86 aa2.88□□□□□ -1.95
CLK3-219ENST00000567805 SFTA2Q6UW10 78 aa2.88□□□□□ -1.95
CLK3-219ENST00000567805 PRR26Q8N8Z3 221 aa2.88□□□□□ -1.95
CLK3-219ENST00000567805 LPAP08519 4548 aa2.88□□□□□ -1.95
CLK3-219ENST00000567805 BCE1O60756 84 aa2.87□□□□□ -1.95
CLK3-219ENST00000567805 RPL28P46779 137 aaKnown RBP2.87□□□□□ -1.95
CLK3-219ENST00000567805 PCP4P48539 62 aa2.87□□□□□ -1.95
CLK3-219ENST00000567805 TMEM170BQ5T4T1 132 aa2.87□□□□□ -1.95
CLK3-219ENST00000567805 BAGE3Q86Y29 109 aa2.87□□□□□ -1.95
CLK3-219ENST00000567805 NKAPP1Q8N9T2 125 aa2.87□□□□□ -1.95
CLK3-219ENST00000567805 CHCHD1Q96BP2 118 aaKnown RBP2.87□□□□□ -1.95
CLK3-219ENST00000567805 LINC00167Q96N53 147 aa2.87□□□□□ -1.95
CLK3-219ENST00000567805 YPEL4Q96NS1 127 aa2.87□□□□□ -1.95
CLK3-219ENST00000567805 ERG28Q9UKR5 140 aa2.87□□□□□ -1.95
CLK3-219ENST00000567805 C11orf86A6NJI1 115 aa2.86□□□□□ -1.95
CLK3-219ENST00000567805 RPL37AP8A6NKH3 93 aa2.86□□□□□ -1.95
CLK3-219ENST00000567805 PFN2P35080 140 aa2.86□□□□□ -1.95
CLK3-219ENST00000567805 IFI27L1Q96BM0 104 aa2.86□□□□□ -1.95
CLK3-219ENST00000567805 SND1-IT1Q9HBX3 110 aa2.86□□□□□ -1.95
CLK3-219ENST00000567805 CHTOPQ9Y3Y2 248 aaKnown RBP2.86□□□□□ -1.95
CLK3-219ENST00000567805 RNF213Q63HN8 5207 aa2.86□□□□□ -1.95
CLK3-219ENST00000567805 IGKV2-28A0A075B6P5 120 aa2.85□□□□□ -1.95
CLK3-219ENST00000567805 TRAV12-1A0A0B4J245 112 aa2.85□□□□□ -1.95
CLK3-219ENST00000567805 GAGE10A6NGK3 116 aa2.85□□□□□ -1.95
CLK3-219ENST00000567805 SCGB1D1O95968 90 aa2.85□□□□□ -1.95
CLK3-219ENST00000567805 IGKV2D-28P01615 120 aa2.85□□□□□ -1.95
CLK3-219ENST00000567805 VPREB1P12018 145 aa2.85□□□□□ -1.95
CLK3-219ENST00000567805 CTAG1AP78358 180 aa2.85□□□□□ -1.95
CLK3-219ENST00000567805 RPL24P83731 157 aaKnown RBP2.85□□□□□ -1.95
CLK3-219ENST00000567805 KRTAP13-1Q8IUC0 172 aa2.85□□□□□ -1.95
CLK3-219ENST00000567805 ZNF625Q96I27 306 aaPredicted RBP2.85□□□□□ -1.95
CLK3-219ENST00000567805 A0A087X002 238 aa2.84□□□□□ -1.95
CLK3-219ENST00000567805 TMEM223A0PJW6 202 aa2.84□□□□□ -1.95
CLK3-219ENST00000567805 KRTAP23-1A1A580 65 aa2.84□□□□□ -1.95
CLK3-219ENST00000567805 HSBP1O75506 76 aa2.84□□□□□ -1.95
CLK3-219ENST00000567805 SCO1O75880 301 aa2.84□□□□□ -1.95
CLK3-219ENST00000567805 UBE2AP49459 152 aa2.84□□□□□ -1.95
CLK3-219ENST00000567805 CBLN2Q8IUK8 224 aa2.84□□□□□ -1.95
CLK3-219ENST00000567805 LINC00587B1AMM8 73 aa2.83□□□□□ -1.96
CLK3-219ENST00000567805 PRYO14603 147 aa2.83□□□□□ -1.96
CLK3-219ENST00000567805 TRGC2P03986 189 aa2.83□□□□□ -1.96
CLK3-219ENST00000567805 CRYGAP11844 174 aa2.83□□□□□ -1.96
CLK3-219ENST00000567805 LINC00158P58513 81 aa2.83□□□□□ -1.96
CLK3-219ENST00000567805 HERV-K104P63124 156 aa2.83□□□□□ -1.96
CLK3-219ENST00000567805 FAM229BQ4G0N7 80 aa2.83□□□□□ -1.96
CLK3-219ENST00000567805 FAM19A2Q8N3H0 131 aa2.83□□□□□ -1.96
CLK3-219ENST00000567805 TYMSOSQ8TAI1 123 aa2.83□□□□□ -1.96
CLK3-219ENST00000567805 TMEM126AQ9H061 195 aa2.83□□□□□ -1.96
CLK3-219ENST00000567805 TMEM238C9JI98 176 aa2.82□□□□□ -1.96
CLK3-219ENST00000567805 M0R378 163 aa2.82□□□□□ -1.96
CLK3-219ENST00000567805 LEPROTL1O95214 131 aa2.82□□□□□ -1.96
CLK3-219ENST00000567805 SMIM13P0DJ93 91 aa2.82□□□□□ -1.96
CLK3-219ENST00000567805 PLNP26678 52 aa2.82□□□□□ -1.96
CLK3-219ENST00000567805 PRLHP81277 87 aa2.82□□□□□ -1.96
CLK3-219ENST00000567805 FAM19A1Q7Z5A9 133 aa2.82□□□□□ -1.96
CLK3-219ENST00000567805 Q8NDZ9 215 aa2.82□□□□□ -1.96
CLK3-219ENST00000567805 HSPB8Q9UJY1 196 aa2.82□□□□□ -1.96
CLK3-219ENST00000567805 IGKV2D-26A0A0A0MRZ7 120 aa2.81□□□□□ -1.96
CLK3-219ENST00000567805 A0A0U1RRA0 63 aa2.81□□□□□ -1.96
CLK3-219ENST00000567805 MYMXA0A1B0GTQ4 84 aa2.81□□□□□ -1.96
CLK3-219ENST00000567805 H0Y8G0 127 aa2.81□□□□□ -1.96
CLK3-219ENST00000567805 SERF1AO75920 110 aa2.81□□□□□ -1.96
CLK3-219ENST00000567805 TSPAN13O95857 204 aa2.81□□□□□ -1.96
CLK3-219ENST00000567805 PRR4Q16378 134 aa2.81□□□□□ -1.96
CLK3-219ENST00000567805 KRTAP13-2Q52LG2 175 aa2.81□□□□□ -1.96
CLK3-219ENST00000567805 MEIG1Q5JSS6 88 aa2.81□□□□□ -1.96
CLK3-219ENST00000567805 MIR7-3HGQ8N6C7 128 aa2.81□□□□□ -1.96
CLK3-219ENST00000567805 MAP1LC3CQ9BXW4 147 aa2.81□□□□□ -1.96
CLK3-219ENST00000567805 ANAPC11Q9NYG5 84 aa2.81□□□□□ -1.96
CLK3-219ENST00000567805 NDUFA12Q9UI09 145 aa2.81□□□□□ -1.96
CLK3-219ENST00000567805 COLCA2A8K830 154 aa2.8□□□□□ -1.96
CLK3-219ENST00000567805 LEPROTO15243 131 aa2.8□□□□□ -1.96
CLK3-219ENST00000567805 DPM2O94777 84 aa2.8□□□□□ -1.96
CLK3-219ENST00000567805 IGKCP01834 107 aa2.8□□□□□ -1.96
CLK3-219ENST00000567805 FABP4P15090 132 aa2.8□□□□□ -1.96
CLK3-219ENST00000567805 NMUP48645 174 aa2.8□□□□□ -1.96
CLK3-219ENST00000567805 HERVK_113P61574 105 aa2.8□□□□□ -1.96
CLK3-219ENST00000567805 S100A12P80511 92 aa2.8□□□□□ -1.96
CLK3-219ENST00000567805 BOD1L2Q8IYS8 172 aa2.8□□□□□ -1.96
CLK3-219ENST00000567805 PLEKHB2Q96CS7 222 aa2.8□□□□□ -1.96
CLK3-219ENST00000567805 LOC107984156A0A0G2JMH3 177 aa2.79□□□□□ -1.96
CLK3-219ENST00000567805 J3QQQ9 107 aa2.79□□□□□ -1.96
CLK3-219ENST00000567805 NCR3O14931 201 aa2.79□□□□□ -1.96
CLK3-219ENST00000567805 SPRR1AP35321 89 aa2.79□□□□□ -1.96
CLK3-219ENST00000567805 TSPEAR-AS2P59090 65 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms