RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 PCP4P48539 62 aa5.94□□□□□ -1.46
CMTM3-209ENST00000565003 BAGE3Q86Y29 109 aa5.94□□□□□ -1.46
CMTM3-209ENST00000565003 KRTAP13-1Q8IUC0 172 aa5.94□□□□□ -1.46
CMTM3-209ENST00000565003 YPEL4Q96NS1 127 aa5.94□□□□□ -1.46
CMTM3-209ENST00000565003 SND1-IT1Q9HBX3 110 aa5.94□□□□□ -1.46
CMTM3-209ENST00000565003 ERG28Q9UKR5 140 aa5.94□□□□□ -1.46
CMTM3-209ENST00000565003 IGKV2-28A0A075B6P5 120 aa5.93□□□□□ -1.46
CMTM3-209ENST00000565003 IGKV2D-28P01615 120 aa5.93□□□□□ -1.46
CMTM3-209ENST00000565003 VPREB1P12018 145 aa5.93□□□□□ -1.46
CMTM3-209ENST00000565003 TMEM170BQ5T4T1 132 aa5.93□□□□□ -1.46
CMTM3-209ENST00000565003 Q8NDZ9 215 aa5.93□□□□□ -1.46
CMTM3-209ENST00000565003 ZNF625Q96I27 306 aaPredicted RBP5.93□□□□□ -1.46
CMTM3-209ENST00000565003 ANAPC11Q9NYG5 84 aa5.92□□□□□ -1.46
CMTM3-209ENST00000565003 CRYGAP11844 174 aa5.91□□□□□ -1.46
CMTM3-209ENST00000565003 UBE2AP49459 152 aa5.91□□□□□ -1.46
CMTM3-209ENST00000565003 COX17Q14061 63 aa5.91□□□□□ -1.46
CMTM3-209ENST00000565003 TMEM238C9JI98 176 aa5.9□□□□□ -1.46
CMTM3-209ENST00000565003 TSPAN13O95857 204 aa5.9□□□□□ -1.46
CMTM3-209ENST00000565003 PRLHP81277 87 aa5.9□□□□□ -1.46
CMTM3-209ENST00000565003 PRR4Q16378 134 aa5.9□□□□□ -1.46
CMTM3-209ENST00000565003 KRTAP13-2Q52LG2 175 aa5.9□□□□□ -1.46
CMTM3-209ENST00000565003 SFTA2Q6UW10 78 aa5.9□□□□□ -1.46
CMTM3-209ENST00000565003 CHCHD1Q96BP2 118 aaKnown RBP5.9□□□□□ -1.46
CMTM3-209ENST00000565003 TRAV12-1A0A0B4J245 112 aa5.89□□□□□ -1.47
CMTM3-209ENST00000565003 TMEM223A0PJW6 202 aa5.89□□□□□ -1.47
CMTM3-209ENST00000565003 M0R378 163 aa5.89□□□□□ -1.47
CMTM3-209ENST00000565003 RPL24P83731 157 aaKnown RBP5.89□□□□□ -1.47
CMTM3-209ENST00000565003 CBLN2Q8IUK8 224 aa5.89□□□□□ -1.47
CMTM3-209ENST00000565003 TYMSOSQ8TAI1 123 aa5.89□□□□□ -1.47
CMTM3-209ENST00000565003 IFI27L1Q96BM0 104 aa5.89□□□□□ -1.47
CMTM3-209ENST00000565003 TMEM126AQ9H061 195 aa5.89□□□□□ -1.47
CMTM3-209ENST00000565003 FAM19A1Q7Z5A9 133 aa5.88□□□□□ -1.47
CMTM3-209ENST00000565003 A0A0U1RRA0 63 aa5.87□□□□□ -1.47
CMTM3-209ENST00000565003 LINC00158P58513 81 aa5.87□□□□□ -1.47
CMTM3-209ENST00000565003 FAM19A2Q8N3H0 131 aa5.87□□□□□ -1.47
CMTM3-209ENST00000565003 H0Y8G0 127 aa5.86□□□□□ -1.47
CMTM3-209ENST00000565003 FAM229BQ4G0N7 80 aa5.86□□□□□ -1.47
CMTM3-209ENST00000565003 HSBP1O75506 76 aa5.85□□□□□ -1.47
CMTM3-209ENST00000565003 SMIM13P0DJ93 91 aa5.85□□□□□ -1.47
CMTM3-209ENST00000565003 LINC00310P59036 64 aa5.85□□□□□ -1.47
CMTM3-209ENST00000565003 TRGC2P03986 189 aa5.84□□□□□ -1.47
CMTM3-209ENST00000565003 PLEKHB2Q96CS7 222 aa5.84□□□□□ -1.47
CMTM3-209ENST00000565003 IGKV2D-26A0A0A0MRZ7 120 aa5.83□□□□□ -1.48
CMTM3-209ENST00000565003 SERF1AO75920 110 aa5.83□□□□□ -1.48
CMTM3-209ENST00000565003 MEIG1Q5JSS6 88 aa5.83□□□□□ -1.48
CMTM3-209ENST00000565003 BOD1L2Q8IYS8 172 aa5.83□□□□□ -1.48
CMTM3-209ENST00000565003 MIR7-3HGQ8N6C7 128 aa5.83□□□□□ -1.48
CMTM3-209ENST00000565003 LINC00304Q8N9R0 145 aa5.83□□□□□ -1.48
CMTM3-209ENST00000565003 RETNLBQ9BQ08 111 aa5.83□□□□□ -1.48
CMTM3-209ENST00000565003 HIGD2AQ9BW72 106 aa5.83□□□□□ -1.48
CMTM3-209ENST00000565003 NCR3O14931 201 aa5.82□□□□□ -1.48
CMTM3-209ENST00000565003 TSPEAR-AS2P59090 65 aa5.82□□□□□ -1.48
CMTM3-209ENST00000565003 HERV-K104P63124 156 aa5.82□□□□□ -1.48
CMTM3-209ENST00000565003 C3orf22Q8N5N4 141 aa5.82□□□□□ -1.48
CMTM3-209ENST00000565003 NDUFA12Q9UI09 145 aa5.82□□□□□ -1.48
CMTM3-209ENST00000565003 LEPROTL1O95214 131 aa5.81□□□□□ -1.48
CMTM3-209ENST00000565003 MYMXA0A1B0GTQ4 84 aa5.8□□□□□ -1.48
CMTM3-209ENST00000565003 PRYO14603 147 aa5.8□□□□□ -1.48
CMTM3-209ENST00000565003 SCGB1D1O95968 90 aa5.8□□□□□ -1.48
CMTM3-209ENST00000565003 SPRR1AP35321 89 aa5.8□□□□□ -1.48
CMTM3-209ENST00000565003 LINC00518Q8N0U6 118 aa5.8□□□□□ -1.48
CMTM3-209ENST00000565003 SPRR4Q96PI1 79 aa5.8□□□□□ -1.48
CMTM3-209ENST00000565003 KRTAP4-16G5E9R7 235 aaPredicted RBP5.79□□□□□ -1.48
CMTM3-209ENST00000565003 PET117Q6UWS5 81 aa5.79□□□□□ -1.48
CMTM3-209ENST00000565003 DAND5Q8N907 189 aa5.79□□□□□ -1.48
CMTM3-209ENST00000565003 PMCHL2Q9BQD1 86 aa5.79□□□□□ -1.48
CMTM3-209ENST00000565003 KCNQ1DNQ9H478 68 aa5.79□□□□□ -1.48
CMTM3-209ENST00000565003 TRBV10-3A0A0K0K1G6 114 aa5.78□□□□□ -1.48
CMTM3-209ENST00000565003 LINC00587B1AMM8 73 aa5.78□□□□□ -1.48
CMTM3-209ENST00000565003 LEPROTO15243 131 aa5.78□□□□□ -1.48
CMTM3-209ENST00000565003 FABP4P15090 132 aa5.78□□□□□ -1.48
CMTM3-209ENST00000565003 PLNP26678 52 aa5.78□□□□□ -1.48
CMTM3-209ENST00000565003 LINC00337Q8N6G1 96 aa5.78□□□□□ -1.48
CMTM3-209ENST00000565003 MAP1LC3CQ9BXW4 147 aa5.78□□□□□ -1.48
CMTM3-209ENST00000565003 HSPB8Q9UJY1 196 aa5.78□□□□□ -1.48
CMTM3-209ENST00000565003 MUC2Q02817 5179 aa5.77□□□□□ -1.49
CMTM3-209ENST00000565003 COLCA2A8K830 154 aa5.77□□□□□ -1.49
CMTM3-209ENST00000565003 J3QQQ9 107 aa5.77□□□□□ -1.49
CMTM3-209ENST00000565003 DPM2O94777 84 aa5.77□□□□□ -1.49
CMTM3-209ENST00000565003 LOC107984156A0A0G2JMH3 177 aa5.76□□□□□ -1.49
CMTM3-209ENST00000565003 ARL17AQ8IVW1 177 aa5.76□□□□□ -1.49
CMTM3-209ENST00000565003 SMCR5Q8TEV8 140 aa5.76□□□□□ -1.49
CMTM3-209ENST00000565003 ZNF706Q9Y5V0 76 aaPredicted RBP5.76□□□□□ -1.49
CMTM3-209ENST00000565003 ETDCA0A1B0GVM5 59 aa5.75□□□□□ -1.49
CMTM3-209ENST00000565003 IGKCP01834 107 aa5.75□□□□□ -1.49
CMTM3-209ENST00000565003 HERVK_113P61574 105 aa5.75□□□□□ -1.49
CMTM3-209ENST00000565003 IGLV7-46A0A075B6I9 117 aa5.74□□□□□ -1.49
CMTM3-209ENST00000565003 B5MCH6 92 aa5.74□□□□□ -1.49
CMTM3-209ENST00000565003 LGALS3P17931 250 aaKnown RBP5.74□□□□□ -1.49
CMTM3-209ENST00000565003 DDTP30046 118 aa5.74□□□□□ -1.49
CMTM3-209ENST00000565003 NMUP48645 174 aa5.74□□□□□ -1.49
CMTM3-209ENST00000565003 TPRXLQ17RH7 258 aa5.74□□□□□ -1.49
CMTM3-209ENST00000565003 Q8NBF4 154 aa5.74□□□□□ -1.49
CMTM3-209ENST00000565003 PPDPFQ9H3Y8 114 aa5.74□□□□□ -1.49
CMTM3-209ENST00000565003 TRBV10-2A0A0K0K1G8 114 aa5.73□□□□□ -1.49
CMTM3-209ENST00000565003 EIF4EBP3O60516 100 aaPredicted RBP5.73□□□□□ -1.49
CMTM3-209ENST00000565003 ERC2-IT1O76042 136 aa5.73□□□□□ -1.49
CMTM3-209ENST00000565003 LINC00483Q53H64 154 aa5.73□□□□□ -1.49
CMTM3-209ENST00000565003 SPAG11AQ6PDA7 123 aa5.73□□□□□ -1.49
CMTM3-209ENST00000565003 SOSTDC1Q6X4U4 206 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms