RNA–Protein interactions for RNA: ENST00000564850.1

RBFOX1-216, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-216ENST00000564850 NRAPQ86VF7 1730 aa1.88□□□□□ -2.11
RBFOX1-216ENST00000564850 A0A1B0GU69 56 aa1.88□□□□□ -2.11
RBFOX1-216ENST00000564850 C10orf99Q6UWK7 81 aa1.88□□□□□ -2.11
RBFOX1-216ENST00000564850 ABRACLQ9P1F3 81 aa1.88□□□□□ -2.11
RBFOX1-216ENST00000564850 MED13LQ71F56 2210 aa1.88□□□□□ -2.11
RBFOX1-216ENST00000564850 ZFHX3Q15911 3703 aa1.88□□□□□ -2.11
RBFOX1-216ENST00000564850 CDC42BPAQ5VT25 1732 aa1.88□□□□□ -2.11
RBFOX1-216ENST00000564850 LINC00959A0A1B0GUT2 108 aa1.87□□□□□ -2.11
RBFOX1-216ENST00000564850 NCR3O14931 201 aa1.87□□□□□ -2.11
RBFOX1-216ENST00000564850 PRB2P02812 416 aaPredicted RBP1.87□□□□□ -2.11
RBFOX1-216ENST00000564850 SERF2P84101 59 aa1.87□□□□□ -2.11
RBFOX1-216ENST00000564850 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.87□□□□□ -2.11
RBFOX1-216ENST00000564850 PLAC4Q8WY50 150 aa1.87□□□□□ -2.11
RBFOX1-216ENST00000564850 SMIM11BQ8TCY0 68 aa1.86□□□□□ -2.11
RBFOX1-216ENST00000564850 NRXN3Q9Y4C0 1643 aa1.86□□□□□ -2.11
RBFOX1-216ENST00000564850 DOT1LQ8TEK3 1739 aa1.86□□□□□ -2.11
RBFOX1-216ENST00000564850 K7EMI3 77 aa1.85□□□□□ -2.11
RBFOX1-216ENST00000564850 PLNP26678 52 aa1.85□□□□□ -2.11
RBFOX1-216ENST00000564850 Q6ZRX8 168 aa1.85□□□□□ -2.11
RBFOX1-216ENST00000564850 NDUFA4O00483 81 aa1.84□□□□□ -2.11
RBFOX1-216ENST00000564850 COX7BP24311 80 aa1.84□□□□□ -2.11
RBFOX1-216ENST00000564850 HAMPP81172 84 aa1.84□□□□□ -2.11
RBFOX1-216ENST00000564850 ABCC8Q09428 1581 aa1.84□□□□□ -2.12
RBFOX1-216ENST00000564850 KMT2BQ9UMN6 2715 aaPredicted RBP1.83□□□□□ -2.12
RBFOX1-216ENST00000564850 CACNA1CQ13936 2221 aa1.83□□□□□ -2.12
RBFOX1-216ENST00000564850 SLIT1O75093 1534 aa1.83□□□□□ -2.12
RBFOX1-216ENST00000564850 TRPM2O94759 1503 aa1.83□□□□□ -2.12
RBFOX1-216ENST00000564850 A0A096LNT2 108 aa1.83□□□□□ -2.12
RBFOX1-216ENST00000564850 SMIM27A0A1W2PRY6 76 aa1.83□□□□□ -2.12
RBFOX1-216ENST00000564850 PIN1P1O15428 100 aa1.83□□□□□ -2.12
RBFOX1-216ENST00000564850 CRCT1Q9UGL9 99 aa1.83□□□□□ -2.12
RBFOX1-216ENST00000564850 NWD1Q149M9 1564 aa1.83□□□□□ -2.12
RBFOX1-216ENST00000564850 FAM208AQ9UK61 1670 aaKnown RBP1.83□□□□□ -2.12
RBFOX1-216ENST00000564850 GVQW2A0A096LPI5 108 aaPredicted RBP1.82□□□□□ -2.12
RBFOX1-216ENST00000564850 RPL38P63173 70 aaKnown RBP1.82□□□□□ -2.12
RBFOX1-216ENST00000564850 UNQ6190/PRO20217Q6UXQ8 127 aa1.82□□□□□ -2.12
RBFOX1-216ENST00000564850 ICE1Q9Y2F5 2266 aa1.82□□□□□ -2.12
RBFOX1-216ENST00000564850 NFAT5O94916 1531 aa1.81□□□□□ -2.12
RBFOX1-216ENST00000564850 DDX60LQ5H9U9 1706 aaKnown RBP1.81□□□□□ -2.12
RBFOX1-216ENST00000564850 G3V318 75 aa1.81□□□□□ -2.12
RBFOX1-216ENST00000564850 M0R1W7 72 aa1.81□□□□□ -2.12
RBFOX1-216ENST00000564850 SPINK13Q1W4C9 94 aa1.81□□□□□ -2.12
RBFOX1-216ENST00000564850 DEFB114Q30KQ6 69 aa1.81□□□□□ -2.12
RBFOX1-216ENST00000564850 SSBP3-AS1Q7Z2R9 100 aa1.81□□□□□ -2.12
RBFOX1-216ENST00000564850 KRTAP4-1Q9BYQ7 146 aa1.81□□□□□ -2.12
RBFOX1-216ENST00000564850 F5P12259 2224 aa1.81□□□□□ -2.12
RBFOX1-216ENST00000564850 A0A0G2JMZ2 1700 aa1.8□□□□□ -2.12
RBFOX1-216ENST00000564850 IGIPA6NJ69 53 aa1.8□□□□□ -2.12
RBFOX1-216ENST00000564850 I3L3M4 83 aa1.8□□□□□ -2.12
RBFOX1-216ENST00000564850 TNCP24821 2201 aa1.8□□□□□ -2.12
RBFOX1-216ENST00000564850 ABCA1O95477 2261 aa1.8□□□□□ -2.12
RBFOX1-216ENST00000564850 ARL14EPLP0DKL9 152 aa1.79□□□□□ -2.12
RBFOX1-216ENST00000564850 TULP4Q9NRJ4 1543 aa1.79□□□□□ -2.12
RBFOX1-216ENST00000564850 PLXNB2O15031 1838 aa1.79□□□□□ -2.12
RBFOX1-216ENST00000564850 QSER1Q2KHR3 1735 aa1.78□□□□□ -2.12
RBFOX1-216ENST00000564850 ETDCA0A1B0GVM5 59 aa1.78□□□□□ -2.12
RBFOX1-216ENST00000564850 CPSF4LA6NMK7 179 aaKnown RBP1.78□□□□□ -2.12
RBFOX1-216ENST00000564850 LY6G6CO95867 125 aa1.78□□□□□ -2.12
RBFOX1-216ENST00000564850 LINC00575Q6W349 94 aa1.78□□□□□ -2.12
RBFOX1-216ENST00000564850 KCNQ1DNQ9H478 68 aa1.78□□□□□ -2.12
RBFOX1-216ENST00000564850 SSC5DA1L4H1 1573 aa1.77□□□□□ -2.13
RBFOX1-216ENST00000564850 LINC01546A6NGU7 62 aa1.77□□□□□ -2.13
RBFOX1-216ENST00000564850 COX6B1P14854 86 aa1.77□□□□□ -2.13
RBFOX1-216ENST00000564850 KRTAP13-4Q3LI77 160 aa1.77□□□□□ -2.13
RBFOX1-216ENST00000564850 LRRC37AA6NMS7 1700 aa1.77□□□□□ -2.13
RBFOX1-216ENST00000564850 E9PCH4 1651 aa1.77□□□□□ -2.13
RBFOX1-216ENST00000564850 H0YGX0 51 aa1.75□□□□□ -2.13
RBFOX1-216ENST00000564850 MRPL33O75394 65 aaKnown RBP1.75□□□□□ -2.13
RBFOX1-216ENST00000564850 CADP27708 2225 aa1.75□□□□□ -2.13
RBFOX1-216ENST00000564850 SPTY2D1-AS1A0A0U1RR47 76 aa1.74□□□□□ -2.13
RBFOX1-216ENST00000564850 RPL37P61927 97 aaKnown RBP1.74□□□□□ -2.13
RBFOX1-216ENST00000564850 SNRPGP62308 76 aaKnown RBP1.74□□□□□ -2.13
RBFOX1-216ENST00000564850 DDX60Q8IY21 1712 aaKnown RBP1.74□□□□□ -2.13
RBFOX1-216ENST00000564850 DEPDC5O75140 1603 aa1.73□□□□□ -2.13
RBFOX1-216ENST00000564850 ASCC3Q8N3C0 2202 aaKnown RBP1.73□□□□□ -2.13
RBFOX1-216ENST00000564850 UBE2DNLQ8IWF7 75 aa1.73□□□□□ -2.13
RBFOX1-216ENST00000564850 TECTAO75443 2155 aa1.73□□□□□ -2.13
RBFOX1-216ENST00000564850 DEFB131BA0A096LNP1 70 aa1.72□□□□□ -2.13
RBFOX1-216ENST00000564850 SPINK4O60575 86 aa1.72□□□□□ -2.13
RBFOX1-216ENST00000564850 ANGP03950 147 aaKnown RBP1.72□□□□□ -2.13
RBFOX1-216ENST00000564850 DEFB103AP81534 67 aa1.72□□□□□ -2.13
RBFOX1-216ENST00000564850 TIMM8BQ9Y5J9 83 aaPredicted RBP1.72□□□□□ -2.13
RBFOX1-216ENST00000564850 URB1O60287 2271 aaKnown RBP1.71□□□□□ -2.13
RBFOX1-216ENST00000564850 ATP7AQ04656 1500 aa1.71□□□□□ -2.14
RBFOX1-216ENST00000564850 CRIPTQ9P021 101 aa1.71□□□□□ -2.14
RBFOX1-216ENST00000564850 SPRR5A0A1B0GTR4 108 aa1.7□□□□□ -2.14
RBFOX1-216ENST00000564850 PRB1P04280 392 aa1.7□□□□□ -2.14
RBFOX1-216ENST00000564850 C4AP0C0L4 1744 aa1.7□□□□□ -2.14
RBFOX1-216ENST00000564850 BRD3OSQ6XYD6 125 aa1.7□□□□□ -2.14
RBFOX1-216ENST00000564850 TOGARAM1Q9Y4F4 1720 aa1.7□□□□□ -2.14
RBFOX1-216ENST00000564850 ANKRD17O75179 2603 aaKnown RBP1.7□□□□□ -2.14
RBFOX1-216ENST00000564850 KIF21BO75037 1637 aa1.69□□□□□ -2.14
RBFOX1-216ENST00000564850 SAMD9LQ8IVG5 1584 aa1.69□□□□□ -2.14
RBFOX1-216ENST00000564850 NDUFA3O95167 84 aa1.69□□□□□ -2.14
RBFOX1-216ENST00000564850 CRIP1P50238 77 aa1.69□□□□□ -2.14
RBFOX1-216ENST00000564850 IQGAP1P46940 1657 aa1.69□□□□□ -2.14
RBFOX1-216ENST00000564850 ASXL3Q9C0F0 2248 aa1.68□□□□□ -2.14
RBFOX1-216ENST00000564850 KNTC1P50748 2209 aa1.67□□□□□ -2.14
RBFOX1-216ENST00000564850 FXYD6P3P58550 94 aa1.67□□□□□ -2.14
RBFOX1-216ENST00000564850 PCOTHQ58A44 107 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms