RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 JMJD7-PLA2G4BH0Y9G9 81 aa8.17□□□□□ -1.1
ABCA3-203ENST00000563623 TMEM256-PLSCR3K7ERE1 68 aa8.17□□□□□ -1.1
ABCA3-203ENST00000563623 CSNK1G2-AS1Q8NCQ2 148 aa8.17□□□□□ -1.1
ABCA3-203ENST00000563623 REG3AQ06141 175 aa8.16□□□□□ -1.1
ABCA3-203ENST00000563623 C19orf73Q9NVV2 129 aa8.16□□□□□ -1.1
ABCA3-203ENST00000563623 NDUFC2-KCTD14E9PQ53 114 aa8.16□□□□□ -1.1
ABCA3-203ENST00000563623 DAD1P61803 113 aa8.15□□□□□ -1.1
ABCA3-203ENST00000563623 C6orf223Q8N319 242 aa8.15□□□□□ -1.1
ABCA3-203ENST00000563623 APCP25054 2843 aa8.15□□□□□ -1.1
ABCA3-203ENST00000563623 ITPR2Q14571 2701 aa8.15□□□□□ -1.1
ABCA3-203ENST00000563623 UNQ6190/PRO20217Q6UXQ8 127 aa8.15□□□□□ -1.11
ABCA3-203ENST00000563623 SPAG11BQ08648 103 aa8.14□□□□□ -1.11
ABCA3-203ENST00000563623 CD164L2Q6UWJ8 174 aa8.14□□□□□ -1.11
ABCA3-203ENST00000563623 ZNF843Q8N446 348 aa8.14□□□□□ -1.11
ABCA3-203ENST00000563623 KLK12Q9UKR0 248 aa8.14□□□□□ -1.11
ABCA3-203ENST00000563623 F8WEM9 126 aa8.13□□□□□ -1.11
ABCA3-203ENST00000563623 XAGE1AQ9HD64 81 aa8.13□□□□□ -1.11
ABCA3-203ENST00000563623 UPK3BQ9BT76 320 aa8.13□□□□□ -1.11
ABCA3-203ENST00000563623 A0A1B0GUV1 79 aa8.11□□□□□ -1.11
ABCA3-203ENST00000563623 C10orf25Q5T742 122 aa8.11□□□□□ -1.11
ABCA3-203ENST00000563623 RMI2Q96E14 147 aa8.11□□□□□ -1.11
ABCA3-203ENST00000563623 NANOS2P60321 138 aaKnown RBP8.11□□□□□ -1.11
ABCA3-203ENST00000563623 SCXQ7RTU7 201 aa8.11□□□□□ -1.11
ABCA3-203ENST00000563623 ATRQ13535 2644 aa8.11□□□□□ -1.11
ABCA3-203ENST00000563623 LY6G6DO95868 133 aa8.11□□□□□ -1.11
ABCA3-203ENST00000563623 Q6ZQY7 126 aa8.11□□□□□ -1.11
ABCA3-203ENST00000563623 KRTAP1-3Q8IUG1 177 aa8.1□□□□□ -1.11
ABCA3-203ENST00000563623 OBSCN-AS1Q96MR7 158 aa8.1□□□□□ -1.11
ABCA3-203ENST00000563623 PMAIP1Q13794 54 aa8.1□□□□□ -1.11
ABCA3-203ENST00000563623 TRBV7-6A0A0J9YX20 115 aa8.09□□□□□ -1.11
ABCA3-203ENST00000563623 CYSRT1A8MQ03 144 aa8.09□□□□□ -1.11
ABCA3-203ENST00000563623 X6R8D5 127 aa8.09□□□□□ -1.11
ABCA3-203ENST00000563623 KIAA0087Q14695 138 aa8.08□□□□□ -1.12
ABCA3-203ENST00000563623 SMR3AQ99954 134 aa8.08□□□□□ -1.12
ABCA3-203ENST00000563623 LINC00575Q6W349 94 aa8.08□□□□□ -1.12
ABCA3-203ENST00000563623 Q8NDZ9 215 aa8.07□□□□□ -1.12
ABCA3-203ENST00000563623 IGHV4-28A0A0C4DH34 117 aa8.07□□□□□ -1.12
ABCA3-203ENST00000563623 LRCOL1A6NCL2 159 aa8.07□□□□□ -1.12
ABCA3-203ENST00000563623 HIGD2BQ4VC39 106 aa8.07□□□□□ -1.12
ABCA3-203ENST00000563623 F8P00451 2351 aa8.07□□□□□ -1.12
ABCA3-203ENST00000563623 COX17Q14061 63 aa8.07□□□□□ -1.12
ABCA3-203ENST00000563623 M0R2N4 97 aa8.06□□□□□ -1.12
ABCA3-203ENST00000563623 PRB2P02812 416 aaPredicted RBP8.05□□□□□ -1.12
ABCA3-203ENST00000563623 ATP5EP2Q5VTU8 51 aa8.05□□□□□ -1.12
ABCA3-203ENST00000563623 TRBV10-3A0A0K0K1G6 114 aa8.05□□□□□ -1.12
ABCA3-203ENST00000563623 ZNF561-AS1K7EIQ3 104 aa8.05□□□□□ -1.12
ABCA3-203ENST00000563623 FP248Q71RG6 208 aaPredicted RBP8.05□□□□□ -1.12
ABCA3-203ENST00000563623 LYRM9A8MSI8 78 aa8.04□□□□□ -1.12
ABCA3-203ENST00000563623 DIRC1Q969H9 104 aa8.04□□□□□ -1.12
ABCA3-203ENST00000563623 CELA1Q9UNI1 258 aa8.04□□□□□ -1.12
ABCA3-203ENST00000563623 MRPL55Q7Z7F7 128 aaKnown RBP8.04□□□□□ -1.12
ABCA3-203ENST00000563623 C16orf95Q9H693 158 aa8.04□□□□□ -1.12
ABCA3-203ENST00000563623 SPATA3Q8NHX4 192 aa8.03□□□□□ -1.12
ABCA3-203ENST00000563623 H7BZZ5 65 aa8.02□□□□□ -1.13
ABCA3-203ENST00000563623 Q6ZQT0 140 aa8.02□□□□□ -1.13
ABCA3-203ENST00000563623 Q6ZVQ6 151 aa8.02□□□□□ -1.13
ABCA3-203ENST00000563623 CAMK2N2Q96S95 79 aa8.02□□□□□ -1.13
ABCA3-203ENST00000563623 UNC79Q9P2D8 2635 aa8.02□□□□□ -1.13
ABCA3-203ENST00000563623 APOC4P55056 127 aa8.02□□□□□ -1.13
ABCA3-203ENST00000563623 LINC01547P58512 204 aaPredicted RBP8.01□□□□□ -1.13
ABCA3-203ENST00000563623 LINC00167Q96N53 147 aa8.01□□□□□ -1.13
ABCA3-203ENST00000563623 SPART-AS1P0CW21 52 aa8.01□□□□□ -1.13
ABCA3-203ENST00000563623 COX7BP24311 80 aa8.01□□□□□ -1.13
ABCA3-203ENST00000563623 LINC00612Q8N6U2 182 aa8□□□□□ -1.13
ABCA3-203ENST00000563623 KRTAP10-3P60369 221 aa8□□□□□ -1.13
ABCA3-203ENST00000563623 DEFB105AQ8NG35 78 aa8□□□□□ -1.13
ABCA3-203ENST00000563623 TRAV7A0A075B6U4 112 aa7.99□□□□□ -1.13
ABCA3-203ENST00000563623 TRAV10A0A0B4J240 114 aa7.99□□□□□ -1.13
ABCA3-203ENST00000563623 UBR5O95071 2799 aaPredicted RBP7.99□□□□□ -1.13
ABCA3-203ENST00000563623 C9orf66Q5T8R8 295 aa7.99□□□□□ -1.13
ABCA3-203ENST00000563623 ZNF73O43830 326 aaPredicted RBP7.98□□□□□ -1.13
ABCA3-203ENST00000563623 LELP1Q5T871 98 aa7.98□□□□□ -1.13
ABCA3-203ENST00000563623 LYPD5Q6UWN5 251 aa7.98□□□□□ -1.13
ABCA3-203ENST00000563623 KRTAP1-1Q07627 177 aa7.97□□□□□ -1.13
ABCA3-203ENST00000563623 MUC7Q8TAX7 377 aa7.97□□□□□ -1.13
ABCA3-203ENST00000563623 C6orf48Q9UBA6 75 aa7.97□□□□□ -1.13
ABCA3-203ENST00000563623 MAST4O15021 2626 aa7.97□□□□□ -1.13
ABCA3-203ENST00000563623 PSPHP1O15172 72 aa7.96□□□□□ -1.14
ABCA3-203ENST00000563623 Q8N9L7 120 aa7.96□□□□□ -1.14
ABCA3-203ENST00000563623 MIFP14174 115 aa7.95□□□□□ -1.14
ABCA3-203ENST00000563623 VWFP04275 2813 aa7.95□□□□□ -1.14
ABCA3-203ENST00000563623 ZNF469Q96JG9 3925 aaPredicted RBP7.95□□□□□ -1.14
ABCA3-203ENST00000563623 IGLV6-57P01721 117 aa7.95□□□□□ -1.14
ABCA3-203ENST00000563623 PDE6GP18545 87 aa7.94□□□□□ -1.14
ABCA3-203ENST00000563623 IGKV2D-24A0A075B6R9 120 aa7.93□□□□□ -1.14
ABCA3-203ENST00000563623 C3orf84H3BNL1 204 aa7.93□□□□□ -1.14
ABCA3-203ENST00000563623 WFDC10BQ8IUB3 73 aa7.93□□□□□ -1.14
ABCA3-203ENST00000563623 SPTSSBQ8NFR3 76 aa7.93□□□□□ -1.14
ABCA3-203ENST00000563623 MGAM2Q2M2H8 2515 aa7.93□□□□□ -1.14
ABCA3-203ENST00000563623 LOC110117498A0A087WWA1 95 aa7.93□□□□□ -1.14
ABCA3-203ENST00000563623 A0A0J9YWU9 116 aa7.93□□□□□ -1.14
ABCA3-203ENST00000563623 IGHV4-30-4P0DP06 118 aa7.93□□□□□ -1.14
ABCA3-203ENST00000563623 FUSP35637 526 aaKnown RBP eCLIP7.93□□□□□ -1.14
ABCA3-203ENST00000563623 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.92□□□□□ -1.14
ABCA3-203ENST00000563623 NREPQ16612 68 aa7.92□□□□□ -1.14
ABCA3-203ENST00000563623 Q6ZRU5 148 aa7.91□□□□□ -1.14
ABCA3-203ENST00000563623 Q8NAQ8 132 aa7.91□□□□□ -1.14
ABCA3-203ENST00000563623 TM2D3Q9BRN9 247 aa7.91□□□□□ -1.14
ABCA3-203ENST00000563623 NBEAL1Q6ZS30 2694 aa7.91□□□□□ -1.14
ABCA3-203ENST00000563623 NKAPP1Q8N9T2 125 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms