RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 LINC00474Q9P2X8 69 aa8.9□□□□□ -0.98
CCDC187-201ENST00000563590 BAHCC1Q9P281 2608 aa8.89□□□□□ -0.99
CCDC187-201ENST00000563590 LRCOL1A6NCL2 159 aa8.89□□□□□ -0.99
CCDC187-201ENST00000563590 VWFP04275 2813 aa8.89□□□□□ -0.99
CCDC187-201ENST00000563590 ANGP03950 147 aaKnown RBP8.89□□□□□ -0.99
CCDC187-201ENST00000563590 GYPEP15421 78 aa8.89□□□□□ -0.99
CCDC187-201ENST00000563590 FAM19A3Q7Z5A8 133 aa8.89□□□□□ -0.99
CCDC187-201ENST00000563590 Q6ZQY7 126 aa8.88□□□□□ -0.99
CCDC187-201ENST00000563590 LINC01006Q8NI28 216 aa8.88□□□□□ -0.99
CCDC187-201ENST00000563590 SERP1Q9Y6X1 66 aa8.88□□□□□ -0.99
CCDC187-201ENST00000563590 TRBV6-8A0A0A6YYG3 113 aa8.87□□□□□ -0.99
CCDC187-201ENST00000563590 KRTAP1-3Q8IUG1 177 aa8.87□□□□□ -0.99
CCDC187-201ENST00000563590 Q8N3U1 123 aa8.87□□□□□ -0.99
CCDC187-201ENST00000563590 Q8N9L7 120 aa8.87□□□□□ -0.99
CCDC187-201ENST00000563590 ATP5EP2Q5VTU8 51 aa8.87□□□□□ -0.99
CCDC187-201ENST00000563590 LINC00959A0A1B0GUT2 108 aa8.87□□□□□ -0.99
CCDC187-201ENST00000563590 C4orf3Q8WVX3 66 aa8.86□□□□□ -0.99
CCDC187-201ENST00000563590 IGHV4-28A0A0C4DH34 117 aa8.86□□□□□ -0.99
CCDC187-201ENST00000563590 M0R2N4 97 aa8.86□□□□□ -0.99
CCDC187-201ENST00000563590 TRAV7A0A075B6U4 112 aa8.85□□□□□ -0.99
CCDC187-201ENST00000563590 IGHV3OR16-9A0A0B4J2B5 98 aa8.85□□□□□ -0.99
CCDC187-201ENST00000563590 LINC01547P58512 204 aaPredicted RBP8.85□□□□□ -0.99
CCDC187-201ENST00000563590 PRO0628Q9UI54 55 aa8.85□□□□□ -0.99
CCDC187-201ENST00000563590 XAGE1AQ9HD64 81 aa8.85□□□□□ -0.99
CCDC187-201ENST00000563590 Q6ZVQ6 151 aa8.84□□□□□ -0.99
CCDC187-201ENST00000563590 A0A087WZ39 114 aa8.84□□□□□ -0.99
CCDC187-201ENST00000563590 SMIM26A0A096LP01 95 aa8.84□□□□□ -0.99
CCDC187-201ENST00000563590 TM2D3Q9BRN9 247 aa8.84□□□□□ -0.99
CCDC187-201ENST00000563590 CR1P17927 2039 aa8.83□□□□□ -1
CCDC187-201ENST00000563590 TRBV7-6A0A0J9YX20 115 aa8.83□□□□□ -1
CCDC187-201ENST00000563590 FBN1P35555 2871 aaKnown RBP8.83□□□□□ -1
CCDC187-201ENST00000563590 H7BZZ5 65 aa8.83□□□□□ -1
CCDC187-201ENST00000563590 DEFB105AQ8NG35 78 aa8.83□□□□□ -1
CCDC187-201ENST00000563590 NDUFC2-KCTD14E9PQ53 114 aa8.82□□□□□ -1
CCDC187-201ENST00000563590 KMT2BQ9UMN6 2715 aaPredicted RBP8.82□□□□□ -1
CCDC187-201ENST00000563590 TENM1Q9UKZ4 2725 aa8.81□□□□□ -1
CCDC187-201ENST00000563590 WIPF1O43516 503 aa8.81□□□□□ -1
CCDC187-201ENST00000563590 OBSCN-AS1Q96MR7 158 aa8.81□□□□□ -1
CCDC187-201ENST00000563590 MIFP14174 115 aa8.8□□□□□ -1
CCDC187-201ENST00000563590 IL17DQ8TAD2 202 aa8.8□□□□□ -1
CCDC187-201ENST00000563590 PRR4Q16378 134 aa8.8□□□□□ -1
CCDC187-201ENST00000563590 C3orf84H3BNL1 204 aa8.79□□□□□ -1
CCDC187-201ENST00000563590 C1orf195Q5TG92 126 aa8.79□□□□□ -1
CCDC187-201ENST00000563590 C6orf223Q8N319 242 aa8.79□□□□□ -1
CCDC187-201ENST00000563590 FSHBP01225 129 aa8.79□□□□□ -1
CCDC187-201ENST00000563590 ZNF561-AS1K7EIQ3 104 aa8.79□□□□□ -1
CCDC187-201ENST00000563590 C16orf74Q96GX8 76 aa8.79□□□□□ -1
CCDC187-201ENST00000563590 NREPQ16612 68 aa8.78□□□□□ -1
CCDC187-201ENST00000563590 CELA1Q9UNI1 258 aa8.78□□□□□ -1
CCDC187-201ENST00000563590 UNQ6190/PRO20217Q6UXQ8 127 aa8.78□□□□□ -1
CCDC187-201ENST00000563590 CHCHD10Q8WYQ3 142 aaPredicted RBP8.78□□□□□ -1
CCDC187-201ENST00000563590 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.77□□□□□ -1.01
CCDC187-201ENST00000563590 SPAG11BQ08648 103 aa8.77□□□□□ -1.01
CCDC187-201ENST00000563590 KLK12Q9UKR0 248 aa8.77□□□□□ -1.01
CCDC187-201ENST00000563590 V9GYY9 64 aa8.76□□□□□ -1.01
CCDC187-201ENST00000563590 OTOGQ6ZRI0 2925 aa8.76□□□□□ -1.01
CCDC187-201ENST00000563590 BPY2O14599 106 aa8.76□□□□□ -1.01
CCDC187-201ENST00000563590 Q6ZQT0 140 aa8.76□□□□□ -1.01
CCDC187-201ENST00000563590 LINC00575Q6W349 94 aa8.75□□□□□ -1.01
CCDC187-201ENST00000563590 SPATA3Q8NHX4 192 aa8.75□□□□□ -1.01
CCDC187-201ENST00000563590 FUSP35637 526 aaKnown RBP eCLIP8.75□□□□□ -1.01
CCDC187-201ENST00000563590 LYPD5Q6UWN5 251 aa8.75□□□□□ -1.01
CCDC187-201ENST00000563590 TMEM254Q8TBM7 123 aa8.75□□□□□ -1.01
CCDC187-201ENST00000563590 Q8IZM0 81 aa8.74□□□□□ -1.01
CCDC187-201ENST00000563590 KRTAP1-1Q07627 177 aa8.74□□□□□ -1.01
CCDC187-201ENST00000563590 REG3AQ06141 175 aa8.73□□□□□ -1.01
CCDC187-201ENST00000563590 HIGD2BQ4VC39 106 aa8.73□□□□□ -1.01
CCDC187-201ENST00000563590 DIRC1Q969H9 104 aa8.73□□□□□ -1.01
CCDC187-201ENST00000563590 NANOS2P60321 138 aaKnown RBP8.73□□□□□ -1.01
CCDC187-201ENST00000563590 FP248Q71RG6 208 aaPredicted RBP8.72□□□□□ -1.01
CCDC187-201ENST00000563590 MUC7Q8TAX7 377 aa8.72□□□□□ -1.01
CCDC187-201ENST00000563590 RETNQ9HD89 108 aa8.72□□□□□ -1.01
CCDC187-201ENST00000563590 TRBV10-3A0A0K0K1G6 114 aa8.72□□□□□ -1.01
CCDC187-201ENST00000563590 OXLD1Q5BKU9 147 aa8.72□□□□□ -1.01
CCDC187-201ENST00000563590 C10orf25Q5T742 122 aa8.72□□□□□ -1.01
CCDC187-201ENST00000563590 FAM30AQ9NZY2 134 aa8.72□□□□□ -1.01
CCDC187-201ENST00000563590 PLAC8L1A1L4L8 177 aa8.71□□□□□ -1.02
CCDC187-201ENST00000563590 HIGD2AQ9BW72 106 aa8.7□□□□□ -1.02
CCDC187-201ENST00000563590 GIG44P09565 113 aaPredicted RBP8.7□□□□□ -1.02
CCDC187-201ENST00000563590 COX7BP24311 80 aa8.7□□□□□ -1.02
CCDC187-201ENST00000563590 AKAP9Q99996 3911 aa8.69□□□□□ -1.02
CCDC187-201ENST00000563590 CYSRT1A8MQ03 144 aa8.69□□□□□ -1.02
CCDC187-201ENST00000563590 PSPHP1O15172 72 aa8.69□□□□□ -1.02
CCDC187-201ENST00000563590 ZNF469Q96JG9 3925 aaPredicted RBP8.69□□□□□ -1.02
CCDC187-201ENST00000563590 PKD1L1Q8TDX9 2849 aa8.68□□□□□ -1.02
CCDC187-201ENST00000563590 KLKP1Q107X0 134 aa8.68□□□□□ -1.02
CCDC187-201ENST00000563590 CD164L2Q6UWJ8 174 aa8.68□□□□□ -1.02
CCDC187-201ENST00000563590 Q8NDZ9 215 aa8.68□□□□□ -1.02
CCDC187-201ENST00000563590 FAM229BQ4G0N7 80 aa8.67□□□□□ -1.02
CCDC187-201ENST00000563590 NDUFC1O43677 76 aa8.67□□□□□ -1.02
CCDC187-201ENST00000563590 LINC00167Q96N53 147 aa8.67□□□□□ -1.02
CCDC187-201ENST00000563590 PRYO14603 147 aa8.67□□□□□ -1.02
CCDC187-201ENST00000563590 SEC61GP60059 68 aa8.67□□□□□ -1.02
CCDC187-201ENST00000563590 PRO0255Q9UI72 69 aa8.66□□□□□ -1.02
CCDC187-201ENST00000563590 PDE6GP18545 87 aa8.66□□□□□ -1.02
CCDC187-201ENST00000563590 ZNF73O43830 326 aaPredicted RBP8.65□□□□□ -1.02
CCDC187-201ENST00000563590 CAMK2N2Q96S95 79 aa8.64□□□□□ -1.03
CCDC187-201ENST00000563590 IGKV2D-24A0A075B6R9 120 aa8.63□□□□□ -1.03
CCDC187-201ENST00000563590 IGLV1-51P01701 117 aa8.63□□□□□ -1.03
CCDC187-201ENST00000563590 CXCL6P80162 114 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms